; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc00G02685 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc00G02685
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description50S ribosomal protein L22, chloroplastic
Genome locationClcCtg023:75539..75979
RNA-Seq ExpressionClc00G02685
SyntenyClc00G02685
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR001063 - Ribosomal protein L22/L17
IPR005727 - Ribosomal protein L22, bacterial/chloroplast-type
IPR036394 - Ribosomal protein L22/L17 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AHM88940.1 ribosomal protein L22, partial [Lagenaria siceraria]9.1e-7798.63Show/hide
Query:  MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS
        MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS
Subjt:  MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS

Query:  LNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDMYNNGGLWDKK
        LNEEEFKRYQYTILDLNKPG WITKEK TDMTCYDMYNNGGLWDKK
Subjt:  LNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDMYNNGGLWDKK

QZL38633.1 ribosomal protein L22 [Citrullus naudinianus]6.3e-7899.32Show/hide
Query:  MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS
        MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS
Subjt:  MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS

Query:  LNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDMYNNGGLWDKK
        LNEEEFKRYQYTILDLNKPG+WITKEKSTDMTCYDMYNNGGLWDKK
Subjt:  LNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDMYNNGGLWDKK

YP_009326029.1 ribosomal protein L22 [Citrullus lanatus]2.8e-78100Show/hide
Query:  MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS
        MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS
Subjt:  MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS

Query:  LNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDMYNNGGLWDKK
        LNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDMYNNGGLWDKK
Subjt:  LNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDMYNNGGLWDKK

YP_009431682.1 ribosomal protein L22 [Citrullus rehmii]1.1e-7799.32Show/hide
Query:  MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS
        MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNT 
Subjt:  MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS

Query:  LNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDMYNNGGLWDKK
        LNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDMYNNGGLWDKK
Subjt:  LNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDMYNNGGLWDKK

YP_009456185.1 ribosomal protein L22 [Lagenaria siceraria]9.1e-7798.63Show/hide
Query:  MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS
        MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS
Subjt:  MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS

Query:  LNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDMYNNGGLWDKK
        LNEEEFKRYQYTILDLNKPG WITKEK TDMTCYDMYNNGGLWDKK
Subjt:  LNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDMYNNGGLWDKK

TrEMBL top hitse value%identityAlignment
A0A1P8LDU4 50S ribosomal protein L22, chloroplastic1.4e-78100Show/hide
Query:  MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS
        MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS
Subjt:  MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS

Query:  LNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDMYNNGGLWDKK
        LNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDMYNNGGLWDKK
Subjt:  LNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDMYNNGGLWDKK

A0A1P8LE31 50S ribosomal protein L22, chloroplastic1.4e-78100Show/hide
Query:  MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS
        MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS
Subjt:  MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS

Query:  LNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDMYNNGGLWDKK
        LNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDMYNNGGLWDKK
Subjt:  LNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDMYNNGGLWDKK

A0A249RX06 50S ribosomal protein L22, chloroplastic1.4e-78100Show/hide
Query:  MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS
        MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS
Subjt:  MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS

Query:  LNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDMYNNGGLWDKK
        LNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDMYNNGGLWDKK
Subjt:  LNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDMYNNGGLWDKK

A0A343A8F0 50S ribosomal protein L22, chloroplastic1.4e-78100Show/hide
Query:  MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS
        MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS
Subjt:  MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS

Query:  LNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDMYNNGGLWDKK
        LNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDMYNNGGLWDKK
Subjt:  LNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDMYNNGGLWDKK

A0A343F2C5 50S ribosomal protein L22, chloroplastic1.4e-78100Show/hide
Query:  MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS
        MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS
Subjt:  MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS

Query:  LNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDMYNNGGLWDKK
        LNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDMYNNGGLWDKK
Subjt:  LNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDMYNNGGLWDKK

SwissProt top hitse value%identityAlignment
A4QLN3 50S ribosomal protein L22, chloroplastic1.6e-5271.23Show/hide
Query:  MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS
        MS HKARRVIDQIRGRSYEE +MILELMPYR CYPI KLVYSAAANASHN GF E +LVISKAEVNQG TVKKLKPRARGRSYPIKR TC ITIVL++ S
Subjt:  MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS

Query:  LNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDMYNNGGLWDKK
           E++K Y    + L KPG   +  ++ ++TCYD Y++GGLWDKK
Subjt:  LNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDMYNNGGLWDKK

A6MM76 50S ribosomal protein L22, chloroplastic8.6e-5475.34Show/hide
Query:  MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS
        MS HKARRVIDQIRGRSYEE +MILELMPYRACYPI KLVYSAAANASHNMGFNE D VISKAEVN GT+VKKLKPRARGRSY IKRPTC ITIVLK+  
Subjt:  MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS

Query:  LNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDMYNNGGLWDKK
        L+E+        I+ L K G WI + K TDMTC DMY +GG+WDKK
Subjt:  LNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDMYNNGGLWDKK

Q49KV9 50S ribosomal protein L22, chloroplastic2.1e-5274.66Show/hide
Query:  MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS
        MS HKARRVIDQIRGRSYEET+MILELMPYRACYPI KLVYSAAANASHNMGFNE  LVISKAEVN+GTT+KKLKPRARGRSY IKRPTC I IVLK+ S
Subjt:  MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS

Query:  LNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDMYNNGGLWDKK
          EEE     +  L   K  EW  K+K TDMT + M   GGLWDKK
Subjt:  LNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDMYNNGGLWDKK

Q4VZM9 50S ribosomal protein L22, chloroplastic6.3e-7393.15Show/hide
Query:  MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS
        MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRA+GRSYPIKRPTCSITIVLKNTS
Subjt:  MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS

Query:  LNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDMYNNGGLWDKK
        +NEEEFKRYQYTI   N+PG  ITKEK TDM CYDMYNNGGLWDKK
Subjt:  LNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDMYNNGGLWDKK

Q8S8V4 50S ribosomal protein L22, chloroplastic3.6e-5273.97Show/hide
Query:  MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS
        MS  KARRVIDQIRGRSYEET+MILELMPYRACYPILKLVYSAAANAS+NMG +E +LVISKAEVN GTTVKKLKPRARGRS+PIKR TC ITIV+K+ S
Subjt:  MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS

Query:  LNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDMYNNGGLWDKK
        LN+E      Y  ++  K   W  K+KST MT +DMYN+GGLWDKK
Subjt:  LNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDMYNNGGLWDKK

Arabidopsis top hitse value%identityAlignment
AT1G52370.1 Ribosomal protein L22p/L17e family protein2.9e-1233.98Show/hide
Query:  SPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTSL
        SP K   V   +RG   E+ +M L++   RA   + +++++A ANA+HN G +   L++++A V +G   KK+   A+GRS  I  P C +T++++ T+ 
Subjt:  SPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTSL

Query:  NEE
         EE
Subjt:  NEE

AT1G52370.2 Ribosomal protein L22p/L17e family protein2.9e-1233.98Show/hide
Query:  SPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTSL
        SP K   V   +RG   E+ +M L++   RA   + +++++A ANA+HN G +   L++++A V +G   KK+   A+GRS  I  P C +T++++ T+ 
Subjt:  SPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTSL

Query:  NEE
         EE
Subjt:  NEE

AT1G52370.3 Ribosomal protein L22p/L17e family protein2.9e-1233.98Show/hide
Query:  SPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTSL
        SP K   V   +RG   E+ +M L++   RA   + +++++A ANA+HN G +   L++++A V +G   KK+   A+GRS  I  P C +T++++ T+ 
Subjt:  SPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTSL

Query:  NEE
         EE
Subjt:  NEE

AT4G28360.1 Ribosomal protein L22p/L17e family protein1.1e-1133.01Show/hide
Query:  SPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTSL
        SP K   V   +RG   E+ ++ L++   RA   + +++++A ANA+HN G +   L++++A V +G   KK+   A+GRS  I  P C +T++++ T+ 
Subjt:  SPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTSL

Query:  NEE
         EE
Subjt:  NEE

ATCG00810.1 ribosomal protein L221.3e-5269.86Show/hide
Query:  MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS
        MS HKARRVIDQIRGRSYEE +MILELMPYR CYPI KLVYSAAANASHN GF E +LVISKAEVNQG TVKKLKPRARGRSYPIKR TC ITIVL++ S
Subjt:  MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS

Query:  LNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDMYNNGGLWDKK
             +++Y+  ++ L KPG      ++ ++TCYD Y++GGLWDKK
Subjt:  LNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDMYNNGGLWDKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCCCTCACAAAGCGCGAAGAGTAATTGATCAGATTCGTGGACGTTCCTACGAAGAAACAATGATGATACTCGAACTCATGCCTTATCGAGCATGTTATCCAATTTT
AAAATTGGTTTATTCGGCAGCAGCAAATGCTAGTCACAATATGGGTTTCAACGAAAGAGATTTAGTCATTAGTAAAGCAGAAGTCAATCAAGGTACTACTGTGAAAAAAT
TAAAACCTCGAGCTCGAGGGCGAAGTTATCCCATAAAACGACCCACTTGTTCTATAACTATTGTATTGAAAAATACATCTTTGAATGAAGAAGAGTTTAAAAGATACCAA
TACACCATATTAGACTTAAACAAACCTGGTGAATGGATAACTAAAGAAAAGTCCACAGATATGACGTGTTATGACATGTATAATAATGGGGGATTATGGGACAAAAAATA
A
mRNA sequenceShow/hide mRNA sequence
ATGTCCCCTCACAAAGCGCGAAGAGTAATTGATCAGATTCGTGGACGTTCCTACGAAGAAACAATGATGATACTCGAACTCATGCCTTATCGAGCATGTTATCCAATTTT
AAAATTGGTTTATTCGGCAGCAGCAAATGCTAGTCACAATATGGGTTTCAACGAAAGAGATTTAGTCATTAGTAAAGCAGAAGTCAATCAAGGTACTACTGTGAAAAAAT
TAAAACCTCGAGCTCGAGGGCGAAGTTATCCCATAAAACGACCCACTTGTTCTATAACTATTGTATTGAAAAATACATCTTTGAATGAAGAAGAGTTTAAAAGATACCAA
TACACCATATTAGACTTAAACAAACCTGGTGAATGGATAACTAAAGAAAAGTCCACAGATATGACGTGTTATGACATGTATAATAATGGGGGATTATGGGACAAAAAATA
A
Protein sequenceShow/hide protein sequence
MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTSLNEEEFKRYQ
YTILDLNKPGEWITKEKSTDMTCYDMYNNGGLWDKK