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Clc00G02710 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc00G02710
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description60S ribosomal protein L31
Genome locationClcCtg016:3995..6819
RNA-Seq ExpressionClc00G02710
SyntenyClc00G02710
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000054 - Ribosomal protein L31e
IPR023621 - Ribosomal protein L31e domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_018816528.1 60S ribosomal protein L31 [Juglans regia]1.6e-4088.66Show/hide
Query:  MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIWSRGIRSVPRRIRVRIARKRNDEEDVKEEFYS
        M DK++K RK EVVTREYTINLHKRLHGCTFKKKAPKAIKE+R+FAQKAMGT+DVRVDVKLNK+IWSRGIRSVPRR+RVRIARKRNDEED KEEFYS
Subjt:  MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIWSRGIRSVPRRIRVRIARKRNDEEDVKEEFYS

XP_022152572.1 60S ribosomal protein L31 [Momordica charantia]1.1e-4191.75Show/hide
Query:  MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIWSRGIRSVPRRIRVRIARKRNDEEDVKEEFYS
        MADKSAKARKSEVVTREYT+NLHKRLHGCTFKKKAP AIKELR+FAQKAMGT+DVRVDVKLNK+IWSRGIRSVPRR+RVRIA+KRNDEED KEEFYS
Subjt:  MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIWSRGIRSVPRRIRVRIARKRNDEEDVKEEFYS

XP_023525745.1 60S ribosomal protein L31-like [Cucurbita pepo subsp. pepo]3.7e-4292.78Show/hide
Query:  MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIWSRGIRSVPRRIRVRIARKRNDEEDVKEEFYS
        MADKSAKARKSEVVTREYT+NLHKRLHGCTFKKKAPKAIKELR+FAQ AMGT+DVRVDVKLNK+IWSRGIRSVPRR+RVRIARKRNDEED KEEFYS
Subjt:  MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIWSRGIRSVPRRIRVRIARKRNDEEDVKEEFYS

XP_038903425.1 60S ribosomal protein L31 [Benincasa hispida]2.6e-4394.85Show/hide
Query:  MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIWSRGIRSVPRRIRVRIARKRNDEEDVKEEFYS
        MADKSAKARKSEVVTREYT+NLHKRLHGCTFKKKAPKAIKELR+FAQKAMGT+DVRVDVKLNKNIWSRGIRSVPRR+RVRIARKRNDEED KEEFYS
Subjt:  MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIWSRGIRSVPRRIRVRIARKRNDEEDVKEEFYS

XP_040995015.1 60S ribosomal protein L31 [Juglans microcarpa x Juglans regia]1.6e-4088.66Show/hide
Query:  MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIWSRGIRSVPRRIRVRIARKRNDEEDVKEEFYS
        M DK++K RK EVVTREYTINLHKRLHGCTFKKKAPKAIKE+R+FAQKAMGT+DVRVDVKLNK+IWSRGIRSVPRR+RVRIARKRNDEED KEEFYS
Subjt:  MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIWSRGIRSVPRRIRVRIARKRNDEEDVKEEFYS

TrEMBL top hitse value%identityAlignment
A0A1Q3BY01 Ribosomal_L31e domain-containing protein1.3e-4088.66Show/hide
Query:  MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIWSRGIRSVPRRIRVRIARKRNDEEDVKEEFYS
        M DK+ K RK EVVTREYTINLHKRLHGCTFKKKAPKAIKE+R+FAQKAMGT+DVRVDVKLNK+IWSRGIRSVPRR+RVRIARKRNDEED KEEFYS
Subjt:  MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIWSRGIRSVPRRIRVRIARKRNDEEDVKEEFYS

A0A218X1Y2 60S ribosomal protein L311.3e-4086.6Show/hide
Query:  MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIWSRGIRSVPRRIRVRIARKRNDEEDVKEEFYS
        MAD+ +K RK EVVTREYTINLHKRLHGCTFKKKAPKAIKE+R+FAQKAMGT+DVRVDVKLNK++WSRGIRSVPRR+RVR+ARKRNDEED KEEFYS
Subjt:  MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIWSRGIRSVPRRIRVRIARKRNDEEDVKEEFYS

A0A2I4EAU8 60S ribosomal protein L317.5e-4188.66Show/hide
Query:  MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIWSRGIRSVPRRIRVRIARKRNDEEDVKEEFYS
        M DK++K RK EVVTREYTINLHKRLHGCTFKKKAPKAIKE+R+FAQKAMGT+DVRVDVKLNK+IWSRGIRSVPRR+RVRIARKRNDEED KEEFYS
Subjt:  MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIWSRGIRSVPRRIRVRIARKRNDEEDVKEEFYS

A0A6J1DGM1 60S ribosomal protein L315.2e-4291.75Show/hide
Query:  MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIWSRGIRSVPRRIRVRIARKRNDEEDVKEEFYS
        MADKSAKARKSEVVTREYT+NLHKRLHGCTFKKKAP AIKELR+FAQKAMGT+DVRVDVKLNK+IWSRGIRSVPRR+RVRIA+KRNDEED KEEFYS
Subjt:  MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIWSRGIRSVPRRIRVRIARKRNDEEDVKEEFYS

I3NMM3 60S ribosomal protein L31A9.8e-4188.66Show/hide
Query:  MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIWSRGIRSVPRRIRVRIARKRNDEEDVKEEFYS
        M +K+AK RK EVVTREYTINLHKRLHGCTFKKKAPKAIKE+R+FAQKAMGT+DVRVDVKLNK+IWSRGIRSVPRR+RVRIARKRNDEED KEEFYS
Subjt:  MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIWSRGIRSVPRRIRVRIARKRNDEEDVKEEFYS

SwissProt top hitse value%identityAlignment
O65071 60S ribosomal protein L312.8e-3777.66Show/hide
Query:  KSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIWSRGIRSVPRRIRVRIARKRNDEEDVKEEFYS
        +  K+R++EV TREYTINLH+RLHGCTFKK APKA+KE+R+FAQKAMGT+DVR+DVKLNK +WSRGIRSVPRR+RVRI+RKRNDEED K+E YS
Subjt:  KSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIWSRGIRSVPRRIRVRIARKRNDEEDVKEEFYS

P46290 60S ribosomal protein L312.3e-3984.54Show/hide
Query:  MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIWSRGIRSVPRRIRVRIARKRNDEEDVKEEFYS
        M+DK+ K RK EVVTREYTINLHKRLH CTFKKKAP AIKE+R+FAQKAMGT DVRVDVKLNK IWSRGIRSVPRR+RVRIARKRND+ED KEE YS
Subjt:  MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIWSRGIRSVPRRIRVRIARKRNDEEDVKEEFYS

P51420 60S ribosomal protein L31-33.7e-3781.32Show/hide
Query:  KARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIWSRGIRSVPRRIRVRIARKRNDEEDVKEEFYS
        K RK EV+TREYTINLH+RLH CTFKKKAPKAIKE+R+FA+KAMGT DVRVDVKLNK IWS+GIR  PRRIRVR+ARKRND+ED KEEF+S
Subjt:  KARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIWSRGIRSVPRRIRVRIARKRNDEEDVKEEFYS

Q9M573 60S ribosomal protein L312.9e-4287.63Show/hide
Query:  MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIWSRGIRSVPRRIRVRIARKRNDEEDVKEEFYS
        MADK +K RK EVV+REYTINLHKRLHGCTFKKKAPKAIKE+R+FAQKAMGT+DVRVDVKLNK+IWSRGIRSVPRRIRVRIARKRND+ED KEE YS
Subjt:  MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIWSRGIRSVPRRIRVRIARKRNDEEDVKEEFYS

Q9MAV7 60S ribosomal protein L311.4e-3985.11Show/hide
Query:  KSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIWSRGIRSVPRRIRVRIARKRNDEEDVKEEFYS
        +  K RK EVVTREYTINLHKRLHGCTFKKKAP AIKE+R+FAQKAMGT DVRVDVKLNK IWSRGIRSVPRR+RVRIARKRND+ED KEE YS
Subjt:  KSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIWSRGIRSVPRRIRVRIARKRNDEEDVKEEFYS

Arabidopsis top hitse value%identityAlignment
AT2G19740.1 Ribosomal protein L31e family protein1.3e-3778.72Show/hide
Query:  KSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIWSRGIRSVPRRIRVRIARKRNDEEDVKEEFYS
        +  K RK EVVTREYTINLH+RLH CTFKKKAP AIKE+R+FA KAMGT DVRVDVKLNK IWS+GIR  PRRIRVR+ARKRND+ED KEEF+S
Subjt:  KSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIWSRGIRSVPRRIRVRIARKRNDEEDVKEEFYS

AT4G26230.1 Ribosomal protein L31e family protein4.5e-3881.32Show/hide
Query:  KARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIWSRGIRSVPRRIRVRIARKRNDEEDVKEEFYS
        K RK EVVTREYTINLH+RLH CTFKKKAPKAIKE+R+FA+K MGT DVRVDVKLNK IWS+GIR  PRRIRVR+ARKRND+ED KEEF+S
Subjt:  KARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIWSRGIRSVPRRIRVRIARKRNDEEDVKEEFYS

AT5G56710.1 Ribosomal protein L31e family protein2.6e-3881.32Show/hide
Query:  KARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIWSRGIRSVPRRIRVRIARKRNDEEDVKEEFYS
        K RK EV+TREYTINLH+RLH CTFKKKAPKAIKE+R+FA+KAMGT DVRVDVKLNK IWS+GIR  PRRIRVR+ARKRND+ED KEEF+S
Subjt:  KARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIWSRGIRSVPRRIRVRIARKRNDEEDVKEEFYS

AT5G56710.2 Ribosomal protein L31e family protein1.6e-1982.69Show/hide
Query:  KARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVD
        K RK EV+TREYTINLH+RLH CTFKKKAPKAIKE+R+FA+KAMGT DVRVD
Subjt:  KARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
atggcggataagtcggctaaggcaagaaaaagtgaggtcgtcaccagggagtacaccatcaatctccacaagcgcttgcacggatgcacattcaagaagaaagcaccgaa
ggccatcaaggaactcagaaggtttgctcagaaggctatgggtaccagtgatgttagagtagacgtgaaacttaacaagaatatatggagtcgtggaattaggagtgtgc
ctcgaaggattcgtgttcgtatcgcacggaagcgaaatgacgaggaagatgtcaaggaggagttttattcttaa
mRNA sequenceShow/hide mRNA sequence
aagacattagattagttggaatttttaaaaaaagttaattgggagagaaaaaataacaaaattaatagatacttgaagacacgcatatcagttgtatcaagtgtcatgca
cgggtattatcaatgggatgatgtgtagtaaaagtaataaattagggttatgaagctaattgatttattttgttttgctcttttctaggtgtttaaaaatattttgcaac
ttttgttgaagtcctgaatttatataagtcagtcaccgtcgccgtcgttgggtttcctagggtttcatcttcagccgcagagacgtttgcagggccgggagcaaaaatgg
cggataagtcggctaaggcaagaaaaagtgaggtcgtcaccagggagtacaccatcaatctccacaagcgcttgcacggatgcacattcaagaagaaagcaccgaaggcc
atcaaggaactcagaaggtttgctcagaaggctatgggtaccagtgatgttagagtagacgtgaaacttaacaagaatatatggagtcgtggaattaggagtgtgcctcg
aaggattcgtgttcgtatcgcacggaagcgaaatgacgaggaagatgtcaaggaggagttttattcttaataactgttgcagacgtacctgcagagggattgaagggctt
gggtaccaaggtcattgatgaagaggactagattagctttgccaaaaccgtcccaaattttggtatgttcttggctcactaatccatttttgacttgtatcaaattgttt
tttttgataagtttacttgtctcaaaattttagatgcacgtcatcaagaaattaaattttttttgacttgcattgcatctgctagacactaaacttgtgattgttccttc
cttcttcttttgtgttggtttctcttcatcttgttaatgtccactgtacataatcttaggataaataaatgagggttaaaagagatttaggatgtttttaattttataga
ttaataggactcaagagtgtatgaaatgactggttggaccctttaaagtagaaaccctcgtcatattatagaactccattttttcattccatttttatctccttttcttt
tcaacctctctctagtttctcctaatctcaccagagcacaagctcaagtatcactcaccactccaaatttctatcatct
Protein sequenceShow/hide protein sequence
MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIWSRGIRSVPRRIRVRIARKRNDEEDVKEEFYS