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Clc00G02760 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc00G02760
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcCtg016:42551..42757
RNA-Seq ExpressionClc00G02760
SyntenyClc00G02760
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581583.1 hypothetical protein SDJN03_21585, partial [Cucurbita argyrosperma subsp. sororia]5.3e-1168.12Show/hide
Query:  MASSMRFPPF--AAVVLVFAMVCLEMKKVHSIEDEIAPMPAMAAAAALFPSTVAFAFNSVFPLLLCVFG
        MA SMR P +   A VL  AMVC EMKKVH IE EI+PMPAMAA +A  PSTVA+AFN+VFP LLC FG
Subjt:  MASSMRFPPF--AAVVLVFAMVCLEMKKVHSIEDEIAPMPAMAAAAALFPSTVAFAFNSVFPLLLCVFG
KGN58599.1 hypothetical protein Csa_001638 [Cucumis sativus]8.7e-1475.71Show/hide
Query:  MASSMRFPPF--AAVVLVFAMVCLEMKKVHSIEDEIAPMPAMAAAAALFPSTVAFAFNSVFPLLLCVFGV
        MASSMRFP F   AVVLV AMV +EMKKV SIEDE+APMPAMAA  A FPS+VA  FN V PLLLCVFGV
Subjt:  MASSMRFPPF--AAVVLVFAMVCLEMKKVHSIEDEIAPMPAMAAAAALFPSTVAFAFNSVFPLLLCVFGV
TrEMBL top hitse value%identityAlignment
A0A0A0LCE5 Uncharacterized protein4.2e-1475.71Show/hide
Query:  MASSMRFPPF--AAVVLVFAMVCLEMKKVHSIEDEIAPMPAMAAAAALFPSTVAFAFNSVFPLLLCVFGV
        MASSMRFP F   AVVLV AMV +EMKKV SIEDE+APMPAMAA  A FPS+VA  FN V PLLLCVFGV
Subjt:  MASSMRFPPF--AAVVLVFAMVCLEMKKVHSIEDEIAPMPAMAAAAALFPSTVAFAFNSVFPLLLCVFGV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
atggcttcctccatgagattccctccttttgctgctgttgttttggtatttgcaatggtgtgcttagaaatgaagaaggttcatagcattgaggatgagatagctccaat
gcctgcaatggctgctgctgctgctctatttccttctactgttgcttttgctttcaattctgttttccctcttttgctttgtgtttttggtgtctaa
mRNA sequenceShow/hide mRNA sequence
atggcttcctccatgagattccctccttttgctgctgttgttttggtatttgcaatggtgtgcttagaaatgaagaaggttcatagcattgaggatgagatagctccaat
gcctgcaatggctgctgctgctgctctatttccttctactgttgcttttgctttcaattctgttttccctcttttgctttgtgtttttggtgtctaa
Protein sequenceShow/hide protein sequence
MASSMRFPPFAAVVLVFAMVCLEMKKVHSIEDEIAPMPAMAAAAALFPSTVAFAFNSVFPLLLCVFGV