; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc01G00170 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G00170
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionnipped-B-like protein B isoform X3
Genome locationClcChr01:111908..112389
RNA-Seq ExpressionClc01G00170
SyntenyClc01G00170
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011654569.1 uncharacterized protein LOC101218478 isoform X1 [Cucumis sativus]2.8e-11100Show/hide
Query:  MEATAAARGASLTMHSPQLSRQEWRAVADNHSARDAADE
        MEATAAARGASLTMHSPQLSRQEWRAVADNHSARDAADE
Subjt:  MEATAAARGASLTMHSPQLSRQEWRAVADNHSARDAADE
XP_011654570.1 uncharacterized protein LOC101218478 isoform X2 [Cucumis sativus]2.8e-11100Show/hide
Query:  MEATAAARGASLTMHSPQLSRQEWRAVADNHSARDAADE
        MEATAAARGASLTMHSPQLSRQEWRAVADNHSARDAADE
Subjt:  MEATAAARGASLTMHSPQLSRQEWRAVADNHSARDAADE
XP_011654571.1 uncharacterized protein LOC101218478 isoform X3 [Cucumis sativus]2.8e-11100Show/hide
Query:  MEATAAARGASLTMHSPQLSRQEWRAVADNHSARDAADE
        MEATAAARGASLTMHSPQLSRQEWRAVADNHSARDAADE
Subjt:  MEATAAARGASLTMHSPQLSRQEWRAVADNHSARDAADE
XP_023550405.1 nipped-B-like protein B isoform X1 [Cucurbita pepo subsp. pepo]8.1e-1197.44Show/hide
Query:  MEATAAARGASLTMHSPQLSRQEWRAVADNHSARDAADE
        MEATAAARGASL+MHSPQLSRQEWRAVADNHSARDAADE
Subjt:  MEATAAARGASLTMHSPQLSRQEWRAVADNHSARDAADE
XP_038874311.1 uncharacterized protein LOC120067016 isoform X4 [Benincasa hispida]8.1e-1197.44Show/hide
Query:  MEATAAARGASLTMHSPQLSRQEWRAVADNHSARDAADE
        MEATA ARGASLTMHSPQLSRQEWRAVADNHSARDAADE
Subjt:  MEATAAARGASLTMHSPQLSRQEWRAVADNHSARDAADE
TrEMBL top hitse value%identityAlignment
A0A0A0KLR3 Uncharacterized protein1.3e-11100Show/hide
Query:  MEATAAARGASLTMHSPQLSRQEWRAVADNHSARDAADE
        MEATAAARGASLTMHSPQLSRQEWRAVADNHSARDAADE
Subjt:  MEATAAARGASLTMHSPQLSRQEWRAVADNHSARDAADE
A0A1S4DSX0 uncharacterized protein LOC103483009 isoform X33.9e-1197.44Show/hide
Query:  MEATAAARGASLTMHSPQLSRQEWRAVADNHSARDAADE
        MEATAAARGASLTMHSPQLSRQEWRAVADNHSARD ADE
Subjt:  MEATAAARGASLTMHSPQLSRQEWRAVADNHSARDAADE
A0A6J1I9Z7 nipped-B-like protein B isoform X23.9e-1197.44Show/hide
Query:  MEATAAARGASLTMHSPQLSRQEWRAVADNHSARDAADE
        MEATAAARGASL+MHSPQLSRQEWRAVADNHSARDAADE
Subjt:  MEATAAARGASLTMHSPQLSRQEWRAVADNHSARDAADE
A0A6J1IB18 nipped-B-like protein B isoform X13.9e-1197.44Show/hide
Query:  MEATAAARGASLTMHSPQLSRQEWRAVADNHSARDAADE
        MEATAAARGASL+MHSPQLSRQEWRAVADNHSARDAADE
Subjt:  MEATAAARGASLTMHSPQLSRQEWRAVADNHSARDAADE
A0A6J1IFW6 nipped-B-like protein B isoform X33.9e-1197.44Show/hide
Query:  MEATAAARGASLTMHSPQLSRQEWRAVADNHSARDAADE
        MEATAAARGASL+MHSPQLSRQEWRAVADNHSARDAADE
Subjt:  MEATAAARGASLTMHSPQLSRQEWRAVADNHSARDAADE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCCACGGCCGCTGCTCGTGGTGCTTCTCTCACCATGCATTCTCCCCAGCTCTCCCGCCAGGAATGGCGAGCCGTTGCTGACAATCACTCCGCTCGAGATGCCGC
CGATGAGGTAGGGCTTTCCTCATTTTTAAGGGTTTCTTGCATTGCCTTCTTTTTTTGTTTCTGCACAAATCGGGATACATGGAAAGCAACTAGCACACTAGTTATGCGTC
TTGTCTTGCTTCCTGCTTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCCACGGCCGCTGCTCGTGGTGCTTCTCTCACCATGCATTCTCCCCAGCTCTCCCGCCAGGAATGGCGAGCCGTTGCTGACAATCACTCCGCTCGAGATGCCGC
CGATGAGGTAGGGCTTTCCTCATTTTTAAGGGTTTCTTGCATTGCCTTCTTTTTTTGTTTCTGCACAAATCGGGATACATGGAAAGCAACTAGCACACTAGTTATGCGTC
TTGTCTTGCTTCCTGCTTGGTAA
Protein sequenceShow/hide protein sequence
MEATAAARGASLTMHSPQLSRQEWRAVADNHSARDAADEVGLSSFLRVSCIAFFFCFCTNRDTWKATSTLVMRLVLLPAW