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Clc01G00190 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G00190
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionauxin-responsive protein SAUR32-like
Genome locationClcChr01:123291..123662
RNA-Seq ExpressionClc01G00190
SyntenyClc01G00190
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605808.1 Auxin-responsive protein SAUR32, partial [Cucurbita argyrosperma subsp. sororia]2.6e-4079.09Show/hide
Query:  HHHLMHLNFHFHIHFPHFHHHRNRLETPKGCLAILVGQEQQRFVIPVIYVNHPLFVQLLKEAEDEYGFDQKGPISIPCPVDDFRTLQGIIHHDHHNHHHL
        H HL  LN  FH+H PHF HHR++ +TPKGCLA+LVGQEQ+RFVIPVIYVNHPLFVQLLK+AEDEYGFDQKGPISIPCPVDDFRTLQGIIHHD    HHL
Subjt:  HHHLMHLNFHFHIHFPHFHHHRNRLETPKGCLAILVGQEQQRFVIPVIYVNHPLFVQLLKEAEDEYGFDQKGPISIPCPVDDFRTLQGIIHHDHHNHHHL

Query:  PVSCFRDSSH
         +SCFR S+H
Subjt:  PVSCFRDSSH

KAG7016800.1 Auxin-responsive protein SAUR32, partial [Cucurbita argyrosperma subsp. argyrosperma]4.5e-5385.71Show/hide
Query:  GFGGGGDKHHHHLMHLNFHFHIHFPHF--HHHRNRLETPKGCLAILVGQEQQRFVIPVIYVNHPLFVQLLKEAEDEYGFDQKGPISIPCPVDDFRTLQGI
        G GGGGDK H HL+HLNFHFHIH PHF  HHHRN++ETPKGCLAILVGQ+Q+RFVIPVIYVNHPLF +LLKEAEDEYGFDQKGPI+IPCPVDDFRTLQGI
Subjt:  GFGGGGDKHHHHLMHLNFHFHIHFPHF--HHHRNRLETPKGCLAILVGQEQQRFVIPVIYVNHPLFVQLLKEAEDEYGFDQKGPISIPCPVDDFRTLQGI

Query:  IHHDHHNHHHLPVSCFRDS
        IHHDHH HH LP+SCFRDS
Subjt:  IHHDHHNHHHLPVSCFRDS

KGN49830.1 hypothetical protein Csa_000428 [Cucumis sativus]7.9e-5889.52Show/hide
Query:  MGFGGGGDKHHH-HLMHLNFHFHIHFPHFHHHRNRLETPKGCLAILVGQEQQRFVIPVIYVNHPLFVQLLKEAEDEYGFDQKGPISIPCPVDDFRTLQGI
        MGF  GGDKHHH HL+HLNFHFH+HFPHF+HHRN++ETPKGCLAILVGQEQQRF IPVIYVNHPLFVQLLK+AEDEYGFDQKGPISIPCPVDDFRTLQGI
Subjt:  MGFGGGGDKHHH-HLMHLNFHFHIHFPHFHHHRNRLETPKGCLAILVGQEQQRFVIPVIYVNHPLFVQLLKEAEDEYGFDQKGPISIPCPVDDFRTLQGI

Query:  IHHDHHNHHHLPVSCFRDSSHPHC
        I+HDHH HHHLPVSCFRDSSH HC
Subjt:  IHHDHHNHHHLPVSCFRDSSHPHC

XP_022974339.1 auxin-responsive protein SAUR32-like [Cucurbita maxima]6.7e-5787.1Show/hide
Query:  GFGGGGDKHHHHLMHLNFHFHIHFPHF--HHHRNRLETPKGCLAILVGQEQQRFVIPVIYVNHPLFVQLLKEAEDEYGFDQKGPISIPCPVDDFRTLQGI
        G GGGGDK H HL+HLNFHFHIH PHF  HHHRN++ETPKGCLAILVGQ+Q+RFVIPVIYVNHPLF QLLKEAEDEYGFDQKGPI+IPCPVDDFRTLQGI
Subjt:  GFGGGGDKHHHHLMHLNFHFHIHFPHF--HHHRNRLETPKGCLAILVGQEQQRFVIPVIYVNHPLFVQLLKEAEDEYGFDQKGPISIPCPVDDFRTLQGI

Query:  IHHDHHNHHHLPVSCFRDSSHPHC
        IHHDHH HH LP+SCFRDSSHPHC
Subjt:  IHHDHHNHHHLPVSCFRDSSHPHC

XP_023549648.1 auxin-responsive protein SAUR32 [Cucurbita pepo subsp. pepo]2.0e-5686.29Show/hide
Query:  GFGGGGDKHHHHLMHLNFHFHIHFPHF--HHHRNRLETPKGCLAILVGQEQQRFVIPVIYVNHPLFVQLLKEAEDEYGFDQKGPISIPCPVDDFRTLQGI
        G GGGGDK H HL+HLNFHFHIH PHF  HHHRN++ETPKGCLAILVGQ+Q+RFVIPVIYVNHPLF +LLKEAEDEYGFDQKGPI+IPCPVDDFRTLQGI
Subjt:  GFGGGGDKHHHHLMHLNFHFHIHFPHF--HHHRNRLETPKGCLAILVGQEQQRFVIPVIYVNHPLFVQLLKEAEDEYGFDQKGPISIPCPVDDFRTLQGI

Query:  IHHDHHNHHHLPVSCFRDSSHPHC
        IHHDHH HH LP+SCFRDSSHPHC
Subjt:  IHHDHHNHHHLPVSCFRDSSHPHC

TrEMBL top hitse value%identityAlignment
A0A0A0KJC7 Uncharacterized protein3.8e-5889.52Show/hide
Query:  MGFGGGGDKHHH-HLMHLNFHFHIHFPHFHHHRNRLETPKGCLAILVGQEQQRFVIPVIYVNHPLFVQLLKEAEDEYGFDQKGPISIPCPVDDFRTLQGI
        MGF  GGDKHHH HL+HLNFHFH+HFPHF+HHRN++ETPKGCLAILVGQEQQRF IPVIYVNHPLFVQLLK+AEDEYGFDQKGPISIPCPVDDFRTLQGI
Subjt:  MGFGGGGDKHHH-HLMHLNFHFHIHFPHFHHHRNRLETPKGCLAILVGQEQQRFVIPVIYVNHPLFVQLLKEAEDEYGFDQKGPISIPCPVDDFRTLQGI

Query:  IHHDHHNHHHLPVSCFRDSSHPHC
        I+HDHH HHHLPVSCFRDSSH HC
Subjt:  IHHDHHNHHHLPVSCFRDSSHPHC

A0A4D6NS58 SAUR family protein1.6e-3262.39Show/hide
Query:  KHHHHLMHLNFHFHIHFPHFHHH----RNRLETPKGCLAILVGQ--EQQRFVIPVIYVNHPLFVQLLKEAEDEYGFDQKGPISIPCPVDDFRTLQGIIHH
        +HHHH  H++FH HI   HFHHH    ++  + PKGC A+LVGQ  EQQRFVIPV+Y+NHPLF++LLKEAEDEYGFDQKGPI+IPC V+ FRT+QGII  
Subjt:  KHHHHLMHLNFHFHIHFPHFHHH----RNRLETPKGCLAILVGQ--EQQRFVIPVIYVNHPLFVQLLKEAEDEYGFDQKGPISIPCPVDDFRTLQGIIHH

Query:  D---HHNHHHLPVSCFR
        +   HH+HHH    CF+
Subjt:  D---HHNHHHLPVSCFR

A0A6J1AA25 auxin-responsive protein SAUR321.2e-3262.9Show/hide
Query:  GGGDKHHHHLMHLNFHFHI-HFPHFHHHRNR--LETPKGCLAILVGQ--EQQRFVIPVIYVNHPLFVQLLKEAEDEYGFDQKGPISIPCPVDDFRTLQGI
        G GDKH     H+NFH H  H   FHHH  +   + PKGCLAILVGQ  EQQRFVIPVIY+NHPLF+QLLKEAE+EYGFDQKGPI+IPC V++FR +QG 
Subjt:  GGGDKHHHHLMHLNFHFHI-HFPHFHHHRNR--LETPKGCLAILVGQ--EQQRFVIPVIYVNHPLFVQLLKEAEDEYGFDQKGPISIPCPVDDFRTLQGI

Query:  I-------HHDHHNHHHLPVSCFR
        I       HH HH+HHH  + CFR
Subjt:  I-------HHDHHNHHHLPVSCFR

A0A6J1IHB8 auxin-responsive protein SAUR32-like3.3e-5787.1Show/hide
Query:  GFGGGGDKHHHHLMHLNFHFHIHFPHF--HHHRNRLETPKGCLAILVGQEQQRFVIPVIYVNHPLFVQLLKEAEDEYGFDQKGPISIPCPVDDFRTLQGI
        G GGGGDK H HL+HLNFHFHIH PHF  HHHRN++ETPKGCLAILVGQ+Q+RFVIPVIYVNHPLF QLLKEAEDEYGFDQKGPI+IPCPVDDFRTLQGI
Subjt:  GFGGGGDKHHHHLMHLNFHFHIHFPHF--HHHRNRLETPKGCLAILVGQEQQRFVIPVIYVNHPLFVQLLKEAEDEYGFDQKGPISIPCPVDDFRTLQGI

Query:  IHHDHHNHHHLPVSCFRDSSHPHC
        IHHDHH HH LP+SCFRDSSHPHC
Subjt:  IHHDHHNHHHLPVSCFRDSSHPHC

A0A6P6W3P2 auxin-responsive protein SAUR32-like1.6e-3260.48Show/hide
Query:  GGDKHHHHLMHLNFHFHIHFPHFHHH--RNRLETPKGCLAILV---GQEQQRFVIPVIYVNHPLFVQLLKEAEDEYGFDQKGPISIPCPVDDFRTLQGII
        GGDK+H    HLNFH H+   HFHHH  ++  + PKGCLAILV   G+EQQRF+IPVIY+NHPLF+QLLKEAE+EYGFD KGP++IPC V++FR +QGII
Subjt:  GGDKHHHHLMHLNFHFHIHFPHFHHH--RNRLETPKGCLAILV---GQEQQRFVIPVIYVNHPLFVQLLKEAEDEYGFDQKGPISIPCPVDDFRTLQGII

Query:  --------HHDHHNHHHLPVSCFR
                HH HH+HHH    CF+
Subjt:  --------HHDHHNHHHLPVSCFR

SwissProt top hitse value%identityAlignment
O22150 Auxin-responsive protein SAUR362.4e-1247.14Show/hide
Query:  HRNRLETPKGCLAILVGQEQ---QRFVIPVIYVNHPLFVQLLKEAEDEYGFDQKGPISIPCPVDDFRTLQ
        H+     P+G LAI VGQ+     R ++P++Y NHPLF +LL+EAE EYGF  +G I+IPC   DF  ++
Subjt:  HRNRLETPKGCLAILVGQEQ---QRFVIPVIYVNHPLFVQLLKEAEDEYGFDQKGPISIPCPVDDFRTLQ

P32295 Indole-3-acetic acid-induced protein ARG72.0e-1150.82Show/hide
Query:  LETPKGCLAILVGQEQQRFVIPVIYVNHPLFVQLLKEAEDEYGFDQ-KGPISIPCPVDDFR
        L+ PKG LA+ VG+  +RFVIPV ++N PLF  LL +AE+E+G+D   G ++IPC  D F+
Subjt:  LETPKGCLAILVGQEQQRFVIPVIYVNHPLFVQLLKEAEDEYGFDQ-KGPISIPCPVDDFR

P33080 Auxin-induced protein X10A1.2e-1147.62Show/hide
Query:  LETPKGCLAILVGQEQQRFVIPVIYVNHPLFVQLLKEAEDEYGFDQ-KGPISIPCPVDDFRTL
        +E PKG L + VG + +RF+IPV Y+N P F  LL +AE+E+G+D   G ++IPC  D+F T+
Subjt:  LETPKGCLAILVGQEQQRFVIPVIYVNHPLFVQLLKEAEDEYGFDQ-KGPISIPCPVDDFRTL

P33081 Auxin-induced protein 15A2.6e-1144.78Show/hide
Query:  ETPKGCLAILVGQEQQRFVIPVIYVNHPLFVQLLKEAEDEYGFDQ-KGPISIPCPVDDFRTLQGIIH
        + PKG LA+ VG++ +RFVIPV Y+N P F  LL +AE+E+G+D   G ++IPC  D F+ +   ++
Subjt:  ETPKGCLAILVGQEQQRFVIPVIYVNHPLFVQLLKEAEDEYGFDQ-KGPISIPCPVDDFRTLQGIIH

Q9ZUZ3 Auxin-responsive protein SAUR324.6e-2457.58Show/hide
Query:  ETPKGCLAILV---GQEQQRFVIPVIYVNHPLFVQLLKEAEDEYGFDQKGPISIPCPVDDFRTLQGII-----------HHDHH----NHHHLPVSCFR
        + PKGCLAI V   G+EQQRF++PV+Y NHPLF+QLLKEAEDEYGFDQKG I+IPC V++FR +Q +I           HH  H     +HHL V CFR
Subjt:  ETPKGCLAILV---GQEQQRFVIPVIYVNHPLFVQLLKEAEDEYGFDQKGPISIPCPVDDFRTLQGII-----------HHDHH----NHHHLPVSCFR

Arabidopsis top hitse value%identityAlignment
AT2G46690.1 SAUR-like auxin-responsive protein family3.2e-2557.58Show/hide
Query:  ETPKGCLAILV---GQEQQRFVIPVIYVNHPLFVQLLKEAEDEYGFDQKGPISIPCPVDDFRTLQGII-----------HHDHH----NHHHLPVSCFR
        + PKGCLAI V   G+EQQRF++PV+Y NHPLF+QLLKEAEDEYGFDQKG I+IPC V++FR +Q +I           HH  H     +HHL V CFR
Subjt:  ETPKGCLAILV---GQEQQRFVIPVIYVNHPLFVQLLKEAEDEYGFDQKGPISIPCPVDDFRTLQGII-----------HHDHH----NHHHLPVSCFR

AT3G60690.1 SAUR-like auxin-responsive protein family2.3e-1550.79Show/hide
Query:  PKGCLAILVGQEQ---QRFVIPVIYVNHPLFVQLLKEAEDEYGFDQKGPISIPCPVDDFRTLQ
        PKG  A+ +G++    QR ++P++Y NHPLF +LL+EAE+E+GF Q+G I+IPCP  DF+ +Q
Subjt:  PKGCLAILVGQEQ---QRFVIPVIYVNHPLFVQLLKEAEDEYGFDQKGPISIPCPVDDFRTLQ

AT3G61900.1 SAUR-like auxin-responsive protein family3.7e-2161.97Show/hide
Query:  ETPKGCLAILVG---QEQQRFVIPVIYVNHPLFVQLLKEAEDEYGFDQKGPISIPCPVDDFRTLQGIIHHD
        + PKGCLAI VG   +E+QRFV+PV Y NHPLF+QLL+EAE+EYGF+QKG I+IPC V+ FR +Q +I+ +
Subjt:  ETPKGCLAILVG---QEQQRFVIPVIYVNHPLFVQLLKEAEDEYGFDQKGPISIPCPVDDFRTLQGIIHHD

AT4G00880.1 SAUR-like auxin-responsive protein family2.7e-2751.56Show/hide
Query:  GGGDKHHHHLMHLNFHFHIHFPHFHHHRNRLE-TPKGCLAILVGQ--EQQRFVIPVIYVNHPLFVQLLKEAEDEYGFDQKGPISIPCPVDDFRTLQGII-
        G GDK       +  H+  H P  HHH +  E  PKGCLA+ VGQ  EQ+RFVIPV+Y NHPLF QLLKEAE+E+GF QKG I+IPC V++FR +QG+I 
Subjt:  GGGDKHHHHLMHLNFHFHIHFPHFHHHRNRLE-TPKGCLAILVGQ--EQQRFVIPVIYVNHPLFVQLLKEAEDEYGFDQKGPISIPCPVDDFRTLQGII-

Query:  ------------HHDHHNHHHLPVSCFR
                     H HH+H+HL + CFR
Subjt:  ------------HHDHHNHHHLPVSCFR

AT5G53590.1 SAUR-like auxin-responsive protein family1.1e-2544.09Show/hide
Query:  HHLMHLNFHFHIHFPHF-----HHHRNRLETPKGCLAILVGQEQ-----QRFVIPVIYVNHPLFVQLLKEAEDEYGFDQKGPISIPCPVDDFRTLQGIIH
        +H+ H+ F FH H PH      HHH +  + PKGC+AI+VG E       RFV+P+++++HPLF+ LLKEAE EYGF   GPI+IPC VD+F+ +Q +I 
Subjt:  HHLMHLNFHFHIHFPHF-----HHHRNRLETPKGCLAILVGQEQ-----QRFVIPVIYVNHPLFVQLLKEAEDEYGFDQKGPISIPCPVDDFRTLQGIIH

Query:  -------------HDHHNHHHLPVSCF
                     H++HNHH+  + CF
Subjt:  -------------HDHHNHHHLPVSCF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTTCGGCGGCGGCGGCGATAAGCATCATCACCACCTCATGCATCTGAATTTCCATTTCCACATTCATTTCCCTCATTTTCACCACCATCGGAATAGGTTAGAGAC
TCCCAAAGGGTGTTTAGCCATTCTTGTTGGCCAAGAGCAACAGCGGTTCGTGATTCCTGTCATTTATGTCAACCATCCTCTCTTCGTCCAGCTCTTGAAGGAGGCCGAGG
ACGAGTATGGCTTCGATCAGAAAGGACCCATCTCCATCCCCTGCCCTGTCGACGACTTTCGCACTCTTCAAGGCATTATTCACCATGACCACCACAACCACCACCACCTT
CCCGTCTCCTGTTTTAGGGATTCTTCTCATCCCCATTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGTTCGGCGGCGGCGGCGATAAGCATCATCACCACCTCATGCATCTGAATTTCCATTTCCACATTCATTTCCCTCATTTTCACCACCATCGGAATAGGTTAGAGAC
TCCCAAAGGGTGTTTAGCCATTCTTGTTGGCCAAGAGCAACAGCGGTTCGTGATTCCTGTCATTTATGTCAACCATCCTCTCTTCGTCCAGCTCTTGAAGGAGGCCGAGG
ACGAGTATGGCTTCGATCAGAAAGGACCCATCTCCATCCCCTGCCCTGTCGACGACTTTCGCACTCTTCAAGGCATTATTCACCATGACCACCACAACCACCACCACCTT
CCCGTCTCCTGTTTTAGGGATTCTTCTCATCCCCATTGCTGA
Protein sequenceShow/hide protein sequence
MGFGGGGDKHHHHLMHLNFHFHIHFPHFHHHRNRLETPKGCLAILVGQEQQRFVIPVIYVNHPLFVQLLKEAEDEYGFDQKGPISIPCPVDDFRTLQGIIHHDHHNHHHL
PVSCFRDSSHPHC