; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc01G00250 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G00250
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptioncytochrome b5
Genome locationClcChr01:148988..150566
RNA-Seq ExpressionClc01G00250
SyntenyClc01G00250
Gene Ontology termsGO:0035672 - oligopeptide transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0020037 - heme binding (molecular function)
GO:0035673 - oligopeptide transmembrane transporter activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001199 - Cytochrome b5-like heme/steroid binding domain
IPR018506 - Cytochrome b5, heme-binding site
IPR036400 - Cytochrome b5-like heme/steroid binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008437642.1 PREDICTED: cytochrome b5 [Cucumis melo]5.8e-7097.76Show/hide
Query:  MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYN
        MASDPKV LFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQ+N
Subjt:  MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYN

Query:  PDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE
        PDKTPEFVIKILQFLVP+LILGLAFAVRHYTKNE
Subjt:  PDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE

XP_011654591.1 cytochrome b5 [Cucumis sativus]2.6e-7097.76Show/hide
Query:  MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYN
        MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKI+IPSQQ+Q+N
Subjt:  MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYN

Query:  PDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE
        PDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE
Subjt:  PDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE

XP_022137808.1 cytochrome b5 [Momordica charantia]1.1e-6895.52Show/hide
Query:  MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYN
        MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLK++YIP+QQTQYN
Subjt:  MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYN

Query:  PDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE
         DKTPEFVIKILQ LVPI ILGLAFAVRHYTKNE
Subjt:  PDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE

XP_022922141.1 cytochrome b5-like isoform X2 [Cucurbita moschata]4.9e-6996.27Show/hide
Query:  MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYN
        MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLL+ATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPL+KIYIPSQQTQYN
Subjt:  MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYN

Query:  PDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE
        PDKT EFVIKILQ LVPI ILGLAFAVRHYTKNE
Subjt:  PDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE

XP_038875650.1 cytochrome b5 [Benincasa hispida]3.4e-7097.76Show/hide
Query:  MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYN
        MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSD+AREMMDKYYIGEIDPSTVP KKIYIPSQQTQ+N
Subjt:  MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYN

Query:  PDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE
        PDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE
Subjt:  PDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE

TrEMBL top hitse value%identityAlignment
A0A0A0KN46 Cytochrome b5 heme-binding domain-containing protein1.3e-7097.76Show/hide
Query:  MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYN
        MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKI+IPSQQ+Q+N
Subjt:  MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYN

Query:  PDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE
        PDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE
Subjt:  PDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE

A0A1S3AU68 cytochrome b52.8e-7097.76Show/hide
Query:  MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYN
        MASDPKV LFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQ+N
Subjt:  MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYN

Query:  PDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE
        PDKTPEFVIKILQFLVP+LILGLAFAVRHYTKNE
Subjt:  PDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE

A0A6J1CBE4 cytochrome b55.3e-6995.52Show/hide
Query:  MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYN
        MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLK++YIP+QQTQYN
Subjt:  MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYN

Query:  PDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE
         DKTPEFVIKILQ LVPI ILGLAFAVRHYTKNE
Subjt:  PDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE

A0A6J1E3B3 cytochrome b5-like isoform X22.4e-6996.27Show/hide
Query:  MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYN
        MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLL+ATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPL+KIYIPSQQTQYN
Subjt:  MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYN

Query:  PDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE
        PDKT EFVIKILQ LVPI ILGLAFAVRHYTKNE
Subjt:  PDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE

A0A6J1K8E3 cytochrome b5-like6.9e-6996.27Show/hide
Query:  MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYN
        MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDA+NDFEDVGHSDSAREMMDKYYIGEIDPSTVP KKIYIPSQQTQYN
Subjt:  MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYN

Query:  PDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE
         DKTPEFVIKILQ LVPI ILGLAFAVRHYTKNE
Subjt:  PDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE

SwissProt top hitse value%identityAlignment
O48845 Cytochrome b5 isoform B5.8e-4964.66Show/hide
Query:  MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYN
        M  + K+    EV++HN+  DCW+VI+GKVY+VT F+EDHPGGD+VLLS+TGKDAT+DFEDVGHS+SAREMM++YY+GEIDP+T+P K  Y P +Q  YN
Subjt:  MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYN

Query:  PDKTPEFVIKILQFLVPILILGLAFAVRHYTKN
         DKT EF+IK+LQFLVP+ ILGLA  +R YTK+
Subjt:  PDKTPEFVIKILQFLVPILILGLAFAVRHYTKN

P40934 Cytochrome b52.6e-5778.36Show/hide
Query:  MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYN
        MAS+ KV  FEEV++HNKTKDCWL+ISGKVYDVTPFM+DHPGGDEVLLS+TGKDATNDFEDVGHSD+AR+MM+KYYIGEID STVP  + Y+   Q  YN
Subjt:  MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYN

Query:  PDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE
         DKTPEF+IKILQFLVPILILGLA  VR YTK E
Subjt:  PDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE

P49098 Cytochrome b56.9e-5067.42Show/hide
Query:  MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYN
        M  + KV    EV++HN  KDCWLVISGKVYDVT F++DHPGGDEVLLSATGKDAT+DFEDVGHS SAR M+D+YY+G+ID +T+P K  Y P  Q  YN
Subjt:  MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYN

Query:  PDKTPEFVIKILQFLVPILILGLAFAVRHYTK
         DKT EFV+K+LQFLVP++ILG+AF +R YTK
Subjt:  PDKTPEFVIKILQFLVPILILGLAFAVRHYTK

P49100 Cytochrome b54.0e-5068.99Show/hide
Query:  KVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYNPDKTP
        KV+  EEVAKHN   DCWL+I GKVY+V+ F+EDHPGGD+VLLS+TGKDAT+DFEDVGHS +AR MMD+YY+G+ID ST+P +  Y+P +Q  YN DKTP
Subjt:  KVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYNPDKTP

Query:  EFVIKILQFLVPILILGLAFAVRHYTKNE
        EF+IKILQFLVP+ ILGLA A+R YTK+E
Subjt:  EFVIKILQFLVPILILGLAFAVRHYTKNE

Q42342 Cytochrome b5 isoform E3.7e-5979.1Show/hide
Query:  MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYN
        M+SD KV  FEEV+KHNKTKDCWL+ISGKVYDVTPFM+DHPGGDEVLLS+TGKDATNDFEDVGHSD+AR+MMDKY+IGEID S+VP  + Y+  QQ  YN
Subjt:  MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYN

Query:  PDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE
         DKTPEF+IKILQFLVPILILGLA  VRHYTK +
Subjt:  PDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE

Arabidopsis top hitse value%identityAlignment
AT1G26340.1 cytochrome B5 isoform A3.1e-2948.82Show/hide
Query:  KVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYNPDKTP
        K++  EE A HNK  DCW+VI GKVYDV+ +M++HPGGD+VLL+  GKDAT+DFED GHS  ARE+M+KY+IGE+D S++P     IP  +  Y  D+  
Subjt:  KVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYNPDKTP

Query:  EFVIKILQ-----FLVPILILGLAFAV
        + V K+       ++VP+ I+ ++ AV
Subjt:  EFVIKILQ-----FLVPILILGLAFAV

AT2G32720.1 cytochrome B5 isoform B4.2e-5064.66Show/hide
Query:  MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYN
        M  + K+    EV++HN+  DCW+VI+GKVY+VT F+EDHPGGD+VLLS+TGKDAT+DFEDVGHS+SAREMM++YY+GEIDP+T+P K  Y P +Q  YN
Subjt:  MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYN

Query:  PDKTPEFVIKILQFLVPILILGLAFAVRHYTKN
         DKT EF+IK+LQFLVP+ ILGLA  +R YTK+
Subjt:  PDKTPEFVIKILQFLVPILILGLAFAVRHYTKN

AT2G46650.1 cytochrome B5 isoform C1.6e-3353.66Show/hide
Query:  FEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYNPDKT--PEF
        F +VAKH    DCW++I GKVYD++ FM++HPGGD VLL+ TGKDA+ DFEDV HS  A+E+M KY IG++D STVP+ + YIP  + +    +T   E 
Subjt:  FEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYNPDKT--PEF

Query:  VIKILQFLVPILILGLAFAVRHY
          K+L +L+P+LILG+AFA+R Y
Subjt:  VIKILQFLVPILILGLAFAVRHY

AT5G48810.1 cytochrome B5 isoform D2.1e-4659.56Show/hide
Query:  MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQ--
        M  D KV    EV++H+  KDCW+VI GKVYDVT F++DHPGGDEV+L++TGKDAT+DFEDVGHS +A+ M+D+YY+G+ID +TVP+K  ++P   T+  
Subjt:  MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQ--

Query:  YNPDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE
           DK+ +FVIK+LQFLVP+LILGLAF +R+YTK +
Subjt:  YNPDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE

AT5G53560.1 cytochrome B5 isoform E2.6e-6079.1Show/hide
Query:  MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYN
        M+SD KV  FEEV+KHNKTKDCWL+ISGKVYDVTPFM+DHPGGDEVLLS+TGKDATNDFEDVGHSD+AR+MMDKY+IGEID S+VP  + Y+  QQ  YN
Subjt:  MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYN

Query:  PDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE
         DKTPEF+IKILQFLVPILILGLA  VRHYTK +
Subjt:  PDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCGGATCCGAAGGTTCATCTATTTGAAGAAGTGGCAAAGCACAACAAAACCAAAGATTGCTGGCTTGTAATCTCTGGGAAGGTTTATGATGTAACTCCTTTCAT
GGAGGATCACCCCGGAGGTGATGAAGTATTATTGTCAGCAACTGGAAAAGATGCTACGAACGATTTCGAAGATGTTGGGCACAGCGATTCAGCAAGAGAAATGATGGACA
AATATTACATTGGAGAAATTGATCCTTCAACAGTTCCTTTGAAGAAGATTTACATTCCATCACAACAAACGCAGTATAACCCAGATAAGACACCCGAGTTTGTGATTAAG
ATCTTGCAGTTTTTGGTTCCCATATTGATTTTGGGTTTGGCGTTTGCTGTTCGACACTACACCAAGAATGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCGGATCCGAAGGTTCATCTATTTGAAGAAGTGGCAAAGCACAACAAAACCAAAGATTGCTGGCTTGTAATCTCTGGGAAGGTTTATGATGTAACTCCTTTCAT
GGAGGATCACCCCGGAGGTGATGAAGTATTATTGTCAGCAACTGGAAAAGATGCTACGAACGATTTCGAAGATGTTGGGCACAGCGATTCAGCAAGAGAAATGATGGACA
AATATTACATTGGAGAAATTGATCCTTCAACAGTTCCTTTGAAGAAGATTTACATTCCATCACAACAAACGCAGTATAACCCAGATAAGACACCCGAGTTTGTGATTAAG
ATCTTGCAGTTTTTGGTTCCCATATTGATTTTGGGTTTGGCGTTTGCTGTTCGACACTACACCAAGAATGAATAA
Protein sequenceShow/hide protein sequence
MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYNPDKTPEFVIK
ILQFLVPILILGLAFAVRHYTKNE