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Clc01G00310 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G00310
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr01:176426..178615
RNA-Seq ExpressionClc01G00310
SyntenyClc01G00310
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN49845.1 hypothetical protein Csa_000580 [Cucumis sativus]4.0e-1059.68Show/hide
Query:  ERLSSDMGCRVAVLIIRKNWNFAYCSA-TLQSSPSAFEDGVEDDPERWLLCCGTPISASKQS
        ERL+SD+GC  AV + ++   FAYC    LQ S  A EDGVEDDP+ WLLC GTP SA KQS
Subjt:  ERLSSDMGCRVAVLIIRKNWNFAYCSA-TLQSSPSAFEDGVEDDPERWLLCCGTPISASKQS
TrEMBL top hitse value%identityAlignment
A0A0A0KJE3 Uncharacterized protein1.9e-1059.68Show/hide
Query:  ERLSSDMGCRVAVLIIRKNWNFAYCSA-TLQSSPSAFEDGVEDDPERWLLCCGTPISASKQS
        ERL+SD+GC  AV + ++   FAYC    LQ S  A EDGVEDDP+ WLLC GTP SA KQS
Subjt:  ERLSSDMGCRVAVLIIRKNWNFAYCSA-TLQSSPSAFEDGVEDDPERWLLCCGTPISASKQS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGGAGCGAGAATCGGAGAGTTTCGAACCTTGAAGCTCGGGCACGGACTGGGTCTGGCAGAAGAGCTCAATCGTAGCATTGGACTCAGCGATGGAGCGAAGGGACT
TGAGGAGGCTTCGAAGACCACAGACTCGGAGAAAGCTAAACTCGGCGCTGGCGTCTCTCAGGCCTGTTCTGAGAGCAAAAGTAACCTCGCGGCAAAGCCTCTGACGATTC
AGAGAATTGACCAATTCCCCGACGGCGGAGGATGTTGCAGACGCGGATTTGTCGTCCGGCGAAGATTCGGCGGAGGGATTCGCCGTGATTCCGTCGGTCCACAATGGCTT
CTTCAGATACATCTCCGATTAGGGCGCGTGGTGGCTGGTGGAAGGTTTGAACATCGACTTTCAAGTGCTGATAAGCAACTGCTTTCTAATTCCAAGTGGTACTATGGTAT
GCTTTTTTCCAAGTGCATAAGCGAGAGACTGAGTTCAGATATGGGATGCAGAGTTGCAGTTCTCATAATAAGGAAGAATTGGAATTTTGCTTACTGCAGTGCCACGCTAC
AAAGCAGTCCATCAGCTTTCGAAGATGGAGTTGAAGATGACCCCGAGCGCTGGCTTTTGTGTTGTGGTACTCCCATTTCTGCTTCCAAGCAGAGTTACTGCATGCCTGCA
CTGTCATTCATAATAGGAAGACCTTCTCTGGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGGAGCGAGAATCGGAGAGTTTCGAACCTTGAAGCTCGGGCACGGACTGGGTCTGGCAGAAGAGCTCAATCGTAGCATTGGACTCAGCGATGGAGCGAAGGGACT
TGAGGAGGCTTCGAAGACCACAGACTCGGAGAAAGCTAAACTCGGCGCTGGCGTCTCTCAGGCCTGTTCTGAGAGCAAAAGTAACCTCGCGGCAAAGCCTCTGACGATTC
AGAGAATTGACCAATTCCCCGACGGCGGAGGATGTTGCAGACGCGGATTTGTCGTCCGGCGAAGATTCGGCGGAGGGATTCGCCGTGATTCCGTCGGTCCACAATGGCTT
CTTCAGATACATCTCCGATTAGGGCGCGTGGTGGCTGGTGGAAGGTTTGAACATCGACTTTCAAGTGCTGATAAGCAACTGCTTTCTAATTCCAAGTGGTACTATGGTAT
GCTTTTTTCCAAGTGCATAAGCGAGAGACTGAGTTCAGATATGGGATGCAGAGTTGCAGTTCTCATAATAAGGAAGAATTGGAATTTTGCTTACTGCAGTGCCACGCTAC
AAAGCAGTCCATCAGCTTTCGAAGATGGAGTTGAAGATGACCCCGAGCGCTGGCTTTTGTGTTGTGGTACTCCCATTTCTGCTTCCAAGCAGAGTTACTGCATGCCTGCA
CTGTCATTCATAATAGGAAGACCTTCTCTGGTCTAA
Protein sequenceShow/hide protein sequence
MQGARIGEFRTLKLGHGLGLAEELNRSIGLSDGAKGLEEASKTTDSEKAKLGAGVSQACSESKSNLAAKPLTIQRIDQFPDGGGCCRRGFVVRRRFGGGIRRDSVGPQWL
LQIHLRLGRVVAGGRFEHRLSSADKQLLSNSKWYYGMLFSKCISERLSSDMGCRVAVLIIRKNWNFAYCSATLQSSPSAFEDGVEDDPERWLLCCGTPISASKQSYCMPA
LSFIIGRPSLV