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Clc01G00370 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G00370
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr01:221373..223596
RNA-Seq ExpressionClc01G00370
SyntenyClc01G00370
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008437637.1 PREDICTED: uncharacterized protein LOC103482984 [Cucumis melo]4.1e-5192.5Show/hide
Query:  MKKENREALDEMKNEKIRPKAG--KRKKKSAIAMENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDSEEAHDRPLMYCTSTSSSV
        MKKENRE LD+MKNEKIR KAG  K+KKKS I MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHED EEAHDRPLMYCTSTSSSV
Subjt:  MKKENREALDEMKNEKIRPKAG--KRKKKSAIAMENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDSEEAHDRPLMYCTSTSSSV

Query:  VIRSFEPLPPPVNDVANLPV
        VIRSFEPLPPPVNDVANLPV
Subjt:  VIRSFEPLPPPVNDVANLPV
XP_011654597.1 uncharacterized protein LOC101207351 isoform X1 [Cucumis sativus]1.0e-4687.3Show/hide
Query:  MKKENREALDE-----MKNEKIRPKAG---KRKKKSAIAMENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDSEEAHDRPLMYCT
        MKK NRE LDE     MKNEKIR KAG   K+KKKS I MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHED EEAHDRPLMYCT
Subjt:  MKKENREALDE-----MKNEKIRPKAG---KRKKKSAIAMENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDSEEAHDRPLMYCT

Query:  STSSSVVIRSFEPLPPPVNDVANLPV
        STSSS VIRSFEPLPPPVNDVANLPV
Subjt:  STSSSVVIRSFEPLPPPVNDVANLPV
XP_022137766.1 uncharacterized protein LOC111009130 [Momordica charantia]9.4e-4097.7Show/hide
Query:  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDSEEAHDRPLMYCTSTSSSVVIRSFEPLPPPVNDVANLPV
        MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHED EEAHDRPLMYC STSSSVVIRSFEPLPPPVNDVANLPV
Subjt:  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDSEEAHDRPLMYCTSTSSSVVIRSFEPLPPPVNDVANLPV
XP_031742148.1 uncharacterized protein LOC101207351 isoform X2 [Cucumis sativus]3.9e-4686.4Show/hide
Query:  MKKENREALDEMKNEKIR----PKAG---KRKKKSAIAMENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDSEEAHDRPLMYCTS
        MKK NRE LDEMKNEK++     KAG   K+KKKS I MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHED EEAHDRPLMYCTS
Subjt:  MKKENREALDEMKNEKIR----PKAG---KRKKKSAIAMENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDSEEAHDRPLMYCTS

Query:  TSSSVVIRSFEPLPPPVNDVANLPV
        TSSS VIRSFEPLPPPVNDVANLPV
Subjt:  TSSSVVIRSFEPLPPPVNDVANLPV
XP_038875439.1 uncharacterized protein LOC120067894 [Benincasa hispida]1.8e-5194.92Show/hide
Query:  MKKENREALDEMKNEKIRPKAGKRKKKSAIAMENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDSEEAHDRPLMYCTSTSSSVVI
        MKKEN EALDEMKNEKIR KAGK KKKSAIAMENQSTCLSYEKLNG+A+WVGTSVASAFFASLERCSCINLSTSDDHED EEAHDRPLMYCTSTSSSVVI
Subjt:  MKKENREALDEMKNEKIRPKAGKRKKKSAIAMENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDSEEAHDRPLMYCTSTSSSVVI

Query:  RSFEPLPPPVNDVANLPV
        RSFEPLPPPVNDVANLPV
Subjt:  RSFEPLPPPVNDVANLPV
TrEMBL top hitse value%identityAlignment
A0A0A0KLU3 Uncharacterized protein8.5e-3997.7Show/hide
Query:  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDSEEAHDRPLMYCTSTSSSVVIRSFEPLPPPVNDVANLPV
        MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHED EEAHDRPLMYCTSTSSS VIRSFEPLPPPVNDVANLPV
Subjt:  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDSEEAHDRPLMYCTSTSSSVVIRSFEPLPPPVNDVANLPV
A0A1S3AU63 uncharacterized protein LOC1034829842.0e-5192.5Show/hide
Query:  MKKENREALDEMKNEKIRPKAG--KRKKKSAIAMENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDSEEAHDRPLMYCTSTSSSV
        MKKENRE LD+MKNEKIR KAG  K+KKKS I MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHED EEAHDRPLMYCTSTSSSV
Subjt:  MKKENREALDEMKNEKIRPKAG--KRKKKSAIAMENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDSEEAHDRPLMYCTSTSSSV

Query:  VIRSFEPLPPPVNDVANLPV
        VIRSFEPLPPPVNDVANLPV
Subjt:  VIRSFEPLPPPVNDVANLPV
A0A6J1C970 uncharacterized protein LOC1110091304.5e-4097.7Show/hide
Query:  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDSEEAHDRPLMYCTSTSSSVVIRSFEPLPPPVNDVANLPV
        MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHED EEAHDRPLMYC STSSSVVIRSFEPLPPPVNDVANLPV
Subjt:  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDSEEAHDRPLMYCTSTSSSVVIRSFEPLPPPVNDVANLPV
A0A6J1E5Z9 uncharacterized protein LOC1114302722.7e-3794.25Show/hide
Query:  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDSEEAHDRPLMYCTSTSSSVVIRSFEPLPPPVNDVANLPV
        MENQSTCLSYEKLNG+ATWVGTSVASAFFASLE CSCINLSTSDDHED +EAHDRPLMYCTSTSSS VIRSFEPLPPPVNDVANLPV
Subjt:  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDSEEAHDRPLMYCTSTSSSVVIRSFEPLPPPVNDVANLPV
A0A6J1ID63 uncharacterized protein LOC1114715018.0e-3791.95Show/hide
Query:  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDSEEAHDRPLMYCTSTSSSVVIRSFEPLPPPVNDVANLPV
        MENQSTCL+YEKLNG+ATWVGTSVASAFFASLE CSCINLSTSDDHED +EAHDRPLMYCTSTSSS +IRSFEPLPPPVNDVANLPV
Subjt:  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDSEEAHDRPLMYCTSTSSSVVIRSFEPLPPPVNDVANLPV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G10810.1 unknown protein5.5e-1462.3Show/hide
Query:  SAIAMENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDSEEAHDRPL
        +A    N ST  S EKL+  A+WV T+V SAFFASLERCSC+NLSTSDD ++ EE+H+RPL
Subjt:  SAIAMENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDSEEAHDRPL
AT4G24026.1 unknown protein6.7e-1253.12Show/hide
Query:  KSAIAMENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTS--DDHEDSEEAHDRPL
        KS     N ST  S EK++  A+W+  +V SAFF SLERC+C+NLSTS  DD +D +E+H RPL
Subjt:  KSAIAMENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTS--DDHEDSEEAHDRPL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAAAGAAAATAGAGAGGCTTTGGATGAAATGAAGAATGAGAAAATAAGACCCAAGGCAGGCAAGAGGAAGAAGAAATCCGCCATAGCCATGGAGAATCAAAGCAC
CTGCTTGTCCTATGAGAAGCTCAACGGAATGGCCACCTGGGTCGGAACCAGCGTCGCCTCCGCTTTCTTCGCCTCTCTTGAGCGATGTTCCTGCATCAATCTCTCCACCT
CCGACGACCACGAAGATTCCGAAGAGGCTCATGATCGCCCTCTCATGTACTGTACCTCCACTTCTTCCTCCGTCGTTATTCGCAGCTTCGAACCGCTTCCTCCTCCGGTC
AATGATGTCGCCAATCTCCCCGTCTGA
mRNA sequenceShow/hide mRNA sequence
CTTTCATTTATCATCTAGGAGAGATTAATTTATATTTAAGAAAAAAACTTTGTGTTGTCAAATACGTAAACAAACAAAGTTTAAAGAAGAAGAGACTTAAAACCAAAGTT
AACGATTGGAAAAATATAGCATATAAAAAAATAGAGAAGATGAAAAAAGAAAATAGAGAGGCTTTGGATGAAATGAAGAATGAGAAAATAAGACCCAAGGCAGGCAAGAG
GAAGAAGAAATCCGCCATAGCCATGGAGAATCAAAGCACCTGCTTGTCCTATGAGAAGCTCAACGGAATGGCCACCTGGGTCGGAACCAGCGTCGCCTCCGCTTTCTTCG
CCTCTCTTGAGCGATGTTCCTGCATCAATCTCTCCACCTCCGACGACCACGAAGATTCCGAAGAGGCTCATGATCGCCCTCTCATGTACTGTACCTCCACTTCTTCCTCC
GTCGTTATTCGCAGCTTCGAACCGCTTCCTCCTCCGGTCAATGATGTCGCCAATCTCCCCGTCTGACCGCCGCTCTCCCTGGATCTGAGTGCAGGAACATGGCCACATAG
CTTGGTGGTAGCAGAGAGCTTTAACATAAATGGCAGAAGAAAGCAGGGGGAACAAGGAAACTGCAAACAAGCACCTGTTAATTCACTATTTTAATAACCACATTCAATGT
AAAGAATATTTAGATTATATTCACACATACAGAAGCCAAGAACAGATCTTTTTTCTATTTTTATATATCTTGTAAGTTGTAATCAACTGTTAATTAAAAGTAAATGTATA
AATCATTTGAATACGATCAAGTCCCTTTCAGTCACAATCCAATCATCAAC
Protein sequenceShow/hide protein sequence
MKKENREALDEMKNEKIRPKAGKRKKKSAIAMENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDSEEAHDRPLMYCTSTSSSVVIRSFEPLPPPV
NDVANLPV