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Clc01G00460 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G00460
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionDUF688 domain-containing protein
Genome locationClcChr01:287892..289926
RNA-Seq ExpressionClc01G00460
SyntenyClc01G00460
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042546.1 uncharacterized protein E6C27_scaffold44G00400 [Cucumis melo var. makuwa]5.2e-4767.78Show/hide
Query:  MCSEPPHTV-ETTSTPTLPLSSLPP-EPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASELLWRVPALR-ELPPPPRLL-NEAKQS-TLPSPTTVLDGPE
        MCSEPPHT    TSTPTLPLS LP  + PWMPTPPRLTL SVPFLWEEAPGKPRPS AS++LW+VP +  +LPPPPRLL NE KQS  LPSPTTVLDG E
Subjt:  MCSEPPHTV-ETTSTPTLPLSSLPP-EPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASELLWRVPALR-ELPPPPRLL-NEAKQS-TLPSPTTVLDGPE

Query:  RAG-DGSKRWGSFRMFKDFVGGNGNDPSATGVDGGGGSGRFRRKRT-SSLSVSSYA-RSHFLVNIYESFKQVVSWRLKNK
        R G  GSKRWGSFRM +               + GGGSGRFRR R+ SSLS+SSYA  SHFLVNIYESFKQV+ WR + +
Subjt:  RAG-DGSKRWGSFRMFKDFVGGNGNDPSATGVDGGGGSGRFRRKRT-SSLSVSSYA-RSHFLVNIYESFKQVVSWRLKNK

KAG6605789.1 hypothetical protein SDJN03_03106, partial [Cucurbita argyrosperma subsp. sororia]4.7e-5673.99Show/hide
Query:  MCSEPPHTVETTSTPTLPLSSLPPEPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASELLWRVPALRELPPPPRLLNEAKQSTLPSPTTVLDGPERAGDG
        M SEPPHT E +STP+L  S LPPEPPWMPTPPRLTLASVPFLWEEAPGKPRP   SE+ W  P L +LPPPPRLLNEA QSTL SPTTVLDGPERA  G
Subjt:  MCSEPPHTVETTSTPTLPLSSLPPEPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASELLWRVPALRELPPPPRLLNEAKQSTLPSPTTVLDGPERAGDG

Query:  SKRWGSFRMFKDFVGGNGNDPSATGVDG-GGGSGRFRRKRTSSLSVSSYARSHFLVNIYESFKQVVSWRLKNK
        SKRWGSFRM K+ VGG GND  AT VDG GGGSGRF +K T SLSVSSY RSHFLV IYE FK+V   R + +
Subjt:  SKRWGSFRMFKDFVGGNGNDPSATGVDG-GGGSGRFRRKRTSSLSVSSYARSHFLVNIYESFKQVVSWRLKNK

XP_022958693.1 uncharacterized protein LOC111459844 [Cucurbita moschata]1.5e-5774.57Show/hide
Query:  MCSEPPHTVETTSTPTLPLSSLPPEPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASELLWRVPALRELPPPPRLLNEAKQSTLPSPTTVLDGPERAGDG
        M SEPPHT E +STP+L  S LPPEPPWMPTPPRLTLASVPFLWEEAPGKPRP   SE+ W  P L +LPPPPRLLNEA QSTL SPTTVLDGPERA  G
Subjt:  MCSEPPHTVETTSTPTLPLSSLPPEPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASELLWRVPALRELPPPPRLLNEAKQSTLPSPTTVLDGPERAGDG

Query:  SKRWGSFRMFKDFVGGNGNDPSATGVD-GGGGSGRFRRKRTSSLSVSSYARSHFLVNIYESFKQVVSWRLKNK
        SKRWGSFRM K+ VGG GND  AT VD GGGGSGRF +K T SLSVSSY RSHFLV IYE FK+V  WR + +
Subjt:  SKRWGSFRMFKDFVGGNGNDPSATGVD-GGGGSGRFRRKRTSSLSVSSYARSHFLVNIYESFKQVVSWRLKNK

XP_022995989.1 uncharacterized protein At4g00950-like [Cucurbita maxima]2.5e-5774.57Show/hide
Query:  MCSEPPHTVETTSTPTLPLSSLPPEPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASELLWRVPALRELPPPPRLLNEAKQSTLPSPTTVLDGPERAGDG
        M SEPPHT+E +STP+L LS LPPEPPWMPTPPRLTLASVPFLWEEAPGKPRP   SE+ W  P L +LPPPPRLLNEA QSTL SPTTVLDGPERA  G
Subjt:  MCSEPPHTVETTSTPTLPLSSLPPEPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASELLWRVPALRELPPPPRLLNEAKQSTLPSPTTVLDGPERAGDG

Query:  SKRWGSFRMFKDFVGGNGNDPSATGVD-GGGGSGRFRRKRTSSLSVSSYARSHFLVNIYESFKQVVSWRLKNK
        SKRWGSFRM K+ V G GND  ATGVD GGGGSGRF +K T SLSVSSY RSHFLV IYE FK+V   R + +
Subjt:  SKRWGSFRMFKDFVGGNGNDPSATGVD-GGGGSGRFRRKRTSSLSVSSYARSHFLVNIYESFKQVVSWRLKNK

XP_038875428.1 uncharacterized protein LOC120067888 [Benincasa hispida]6.8e-6383.97Show/hide
Query:  MCSEPPHTVETTSTPTLPLSSLPPEPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASELLWRVPALRELPPPPRLLNEAKQSTLPSPTTVLDGPERAGDG
        MCSEPPHT   TS PTLPLS LPPEPPWMPTPPRLTLASVPFLWEEAPGKPR S AS++LW VPAL ELPPPP+L NEAKQSTLPSPTT+LDGPERAGD 
Subjt:  MCSEPPHTVETTSTPTLPLSSLPPEPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASELLWRVPALRELPPPPRLLNEAKQSTLPSPTTVLDGPERAGDG

Query:  SKRWGSFRMFKDFVG--GNGNDPSATGVDGGGGSGRFRRKRTSSLSVSSYARSHFL
        SKRWGSFRMFKDFVG  GNGND  A G D GGGSG FRRKRTSS SVSSY RSHFL
Subjt:  SKRWGSFRMFKDFVG--GNGNDPSATGVDGGGGSGRFRRKRTSSLSVSSYARSHFL

TrEMBL top hitse value%identityAlignment
A0A0A0KJF7 Uncharacterized protein2.1e-4162.23Show/hide
Query:  MCSEPPHTVE--TTSTPTLPLSSLPP-EPPWMPTPPRLTLASVPFLWEEAPGKP-RPSPASELLWRVP--ALRELPPPPRLL-NE-AKQS-TLPSPTTVL
        MCSEPPH+     TSTPTLPLS LP  EPPWMPTPPRLTL SVPFLWEEAPGKP RPS AS++LW+VP  A  +LPPPPRLL NE  KQS  L SPT V+
Subjt:  MCSEPPHTVE--TTSTPTLPLSSLPP-EPPWMPTPPRLTLASVPFLWEEAPGKP-RPSPASELLWRVP--ALRELPPPPRLL-NE-AKQS-TLPSPTTVL

Query:  DGPERAGD---GSKRWGSFRMFKDFVGGNGNDPSATGVDGGGGSGRFRRKR---TSSLSVSSYARSHFLVNIYESFKQVVSWRLKNKR
        +G ++ G    GSKRWGSFRM                     GSGRFRR R   +SSLS+SSYA SHFLVNIYESFKQ+V WR +  R
Subjt:  DGPERAGD---GSKRWGSFRMFKDFVGGNGNDPSATGVDGGGGSGRFRRKR---TSSLSVSSYARSHFLVNIYESFKQVVSWRLKNKR

A0A1S3AU39 uncharacterized protein LOC1034829692.8e-4667.22Show/hide
Query:  MCSEPPHTV-ETTSTPTLPLSSLPP-EPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASELLWRVPALR-ELPPPPRLL-NEAKQS-TLPSPTTVLDGPE
        MCSEPPHT    TSTPTLPLS LP  + PWMPTPPRLTL SVPFLWEEAPGKPRPS AS++LW+VP +  +LPPPPRLL NE KQS  LPSPTTVLDG E
Subjt:  MCSEPPHTV-ETTSTPTLPLSSLPP-EPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASELLWRVPALR-ELPPPPRLL-NEAKQS-TLPSPTTVLDGPE

Query:  RAG-DGSKRWGSFRMFKDFVGGNGNDPSATGVDGGGGSGRFRRKRT-SSLSVSSYARSH-FLVNIYESFKQVVSWRLKNK
        R G  GSKRWGSFRM +               + GGGSGRFRR R+ SSLS+SSYA S  FLVNIYESFKQV+ WR + +
Subjt:  RAG-DGSKRWGSFRMFKDFVGGNGNDPSATGVDGGGGSGRFRRKRT-SSLSVSSYARSH-FLVNIYESFKQVVSWRLKNK

A0A5A7TKS5 Uncharacterized protein2.5e-4767.78Show/hide
Query:  MCSEPPHTV-ETTSTPTLPLSSLPP-EPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASELLWRVPALR-ELPPPPRLL-NEAKQS-TLPSPTTVLDGPE
        MCSEPPHT    TSTPTLPLS LP  + PWMPTPPRLTL SVPFLWEEAPGKPRPS AS++LW+VP +  +LPPPPRLL NE KQS  LPSPTTVLDG E
Subjt:  MCSEPPHTV-ETTSTPTLPLSSLPP-EPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASELLWRVPALR-ELPPPPRLL-NEAKQS-TLPSPTTVLDGPE

Query:  RAG-DGSKRWGSFRMFKDFVGGNGNDPSATGVDGGGGSGRFRRKRT-SSLSVSSYA-RSHFLVNIYESFKQVVSWRLKNK
        R G  GSKRWGSFRM +               + GGGSGRFRR R+ SSLS+SSYA  SHFLVNIYESFKQV+ WR + +
Subjt:  RAG-DGSKRWGSFRMFKDFVGGNGNDPSATGVDGGGGSGRFRRKRT-SSLSVSSYA-RSHFLVNIYESFKQVVSWRLKNK

A0A6J1H3S6 uncharacterized protein LOC1114598447.1e-5874.57Show/hide
Query:  MCSEPPHTVETTSTPTLPLSSLPPEPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASELLWRVPALRELPPPPRLLNEAKQSTLPSPTTVLDGPERAGDG
        M SEPPHT E +STP+L  S LPPEPPWMPTPPRLTLASVPFLWEEAPGKPRP   SE+ W  P L +LPPPPRLLNEA QSTL SPTTVLDGPERA  G
Subjt:  MCSEPPHTVETTSTPTLPLSSLPPEPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASELLWRVPALRELPPPPRLLNEAKQSTLPSPTTVLDGPERAGDG

Query:  SKRWGSFRMFKDFVGGNGNDPSATGVD-GGGGSGRFRRKRTSSLSVSSYARSHFLVNIYESFKQVVSWRLKNK
        SKRWGSFRM K+ VGG GND  AT VD GGGGSGRF +K T SLSVSSY RSHFLV IYE FK+V  WR + +
Subjt:  SKRWGSFRMFKDFVGGNGNDPSATGVD-GGGGSGRFRRKRTSSLSVSSYARSHFLVNIYESFKQVVSWRLKNK

A0A6J1K7H0 uncharacterized protein At4g00950-like1.2e-5774.57Show/hide
Query:  MCSEPPHTVETTSTPTLPLSSLPPEPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASELLWRVPALRELPPPPRLLNEAKQSTLPSPTTVLDGPERAGDG
        M SEPPHT+E +STP+L LS LPPEPPWMPTPPRLTLASVPFLWEEAPGKPRP   SE+ W  P L +LPPPPRLLNEA QSTL SPTTVLDGPERA  G
Subjt:  MCSEPPHTVETTSTPTLPLSSLPPEPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASELLWRVPALRELPPPPRLLNEAKQSTLPSPTTVLDGPERAGDG

Query:  SKRWGSFRMFKDFVGGNGNDPSATGVD-GGGGSGRFRRKRTSSLSVSSYARSHFLVNIYESFKQVVSWRLKNK
        SKRWGSFRM K+ V G GND  ATGVD GGGGSGRF +K T SLSVSSY RSHFLV IYE FK+V   R + +
Subjt:  SKRWGSFRMFKDFVGGNGNDPSATGVD-GGGGSGRFRRKRTSSLSVSSYARSHFLVNIYESFKQVVSWRLKNK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G27810.1 unknown protein2.8e-1437.17Show/hide
Query:  STPTLPLSSLP----PEPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASELLWRVPALRE---------LPPPPRLLNEAKQSTLPSPTTVLDGP-----
        +TP LPL S+P     + P + TPP     SVPFLWEEAPGKPR S  ++ L      RE         L  PPRL   A     PSPTTVLDGP     
Subjt:  STPTLPLSSLP----PEPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASELLWRVPALRE---------LPPPPRLLNEAKQSTLPSPTTVLDGP-----

Query:  ---------ERAGDGSKRWGSFRMFKDFVGGNGNDPSATGVDGGGGS----GRFRRKRTSSLSVSSYARSHFLVNIYESFKQVVSWRLKNK
                 ERA +G   +                 ++   DGGGG+     R RRK   SL   S+++S FL  +Y+ FKQV+ WR + +
Subjt:  ---------ERAGDGSKRWGSFRMFKDFVGGNGNDPSATGVDGGGGS----GRFRRKRTSSLSVSSYARSHFLVNIYESFKQVVSWRLKNK

AT5G51680.1 hydroxyproline-rich glycoprotein family protein4.4e-0442.86Show/hide
Query:  SLPPEPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASELLWRVPALRELPPPPRLLNEAKQSTLPSPTTV
        S PP PP +P P +L + SVPF WEE PGKP P+ +++         +LP PP  L  A  + LP P  V
Subjt:  SLPPEPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASELLWRVPALRELPPPPRLLNEAKQSTLPSPTTV

AT5G53030.1 unknown protein1.2e-1233.49Show/hide
Query:  LPLSSLP------PEPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASELLWRVPALRELPPPPRLLNEAKQSTL--PSPTTVLDGP--------------
        LPL S P         P + TPP     SVPFLWEEAPGKPR       L +   +R L  PPRL+   + +T+  PSPTTVLDGP              
Subjt:  LPLSSLP------PEPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASELLWRVPALRELPPPPRLLNEAKQSTL--PSPTTVLDGP--------------

Query:  -----------------ERAGDGSKRWGSFRMFKDFVGG---------NGNDPSATGVDGGGGSGRFRR----------KRTSSLSVSSYARSHFLV---
                         ER   GS RWGSF   K+   G         +G D       GGGG G F            K+ S  ++S   +S F +   
Subjt:  -----------------ERAGDGSKRWGSFRMFKDFVGG---------NGNDPSATGVDGGGGSGRFRR----------KRTSSLSVSSYARSHFLV---

Query:  -NIYESFKQVVSWRLKNK
          +YE FKQV+ W+ K +
Subjt:  -NIYESFKQVVSWRLKNK

AT5G53030.2 unknown protein1.9e-1033.5Show/hide
Query:  LPLSSLP------PEPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASELLWRVPALRELPPPPRLLNEAKQSTL--PSPTTVLDGP--------------
        LPL S P         P + TPP     SVPFLWEEAPGKPR       L +   +R L  PPRL+   + +T+  PSPTTVLDGP              
Subjt:  LPLSSLP------PEPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASELLWRVPALRELPPPPRLLNEAKQSTL--PSPTTVLDGP--------------

Query:  -----------------ERAGDGSKRWGSFRMFKDFVGG---------NGNDPSATGVDGGGGSGRFRR----------KRTSSLSVSSYARSHFLVNIY
                         ER   GS RWGSF   K+   G         +G D       GGGG G F            K+ S  ++S   +S F V+ Y
Subjt:  -----------------ERAGDGSKRWGSFRMFKDFVGG---------NGNDPSATGVDGGGGSGRFRR----------KRTSSLSVSSYARSHFLVNIY

Query:  ESF
        + F
Subjt:  ESF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCTCGGAGCCGCCGCATACGGTGGAGACGACCTCTACTCCCACCCTACCTCTGTCTTCGCTTCCTCCGGAGCCGCCGTGGATGCCAACGCCGCCGCGTTTAACTTT
GGCCTCCGTTCCCTTTCTGTGGGAGGAGGCGCCGGGGAAGCCGCGGCCATCCCCCGCATCGGAACTTCTATGGCGGGTGCCGGCGTTGAGGGAGCTGCCTCCGCCGCCGC
GGCTTTTGAACGAAGCCAAACAGAGCACTCTACCGTCTCCCACGACGGTGCTCGACGGCCCAGAAAGGGCTGGCGACGGATCAAAGAGATGGGGTTCTTTTAGGATGTTT
AAGGATTTCGTCGGTGGTAACGGCAACGACCCTTCGGCCACCGGTGTCGACGGCGGCGGCGGAAGCGGGAGGTTTAGAAGGAAAAGAACTTCATCATTGTCAGTTTCTTC
TTATGCAAGATCACACTTCTTGGTGAATATCTATGAGAGCTTTAAACAGGTAGTTTCGTGGAGACTGAAGAACAAAAGATAA
mRNA sequenceShow/hide mRNA sequence
TTTCTCTCTCTCTCTCTCTGTTTCTAAAGGTTGTATTAAAGTCTGAACTACTACTCTACACAATCTCTCTAACTCCCTACACTCACATCTATTTACTCATTTCTACCAAC
CCATGTGCTCGGAGCCGCCGCATACGGTGGAGACGACCTCTACTCCCACCCTACCTCTGTCTTCGCTTCCTCCGGAGCCGCCGTGGATGCCAACGCCGCCGCGTTTAACT
TTGGCCTCCGTTCCCTTTCTGTGGGAGGAGGCGCCGGGGAAGCCGCGGCCATCCCCCGCATCGGAACTTCTATGGCGGGTGCCGGCGTTGAGGGAGCTGCCTCCGCCGCC
GCGGCTTTTGAACGAAGCCAAACAGAGCACTCTACCGTCTCCCACGACGGTGCTCGACGGCCCAGAAAGGGCTGGCGACGGATCAAAGAGATGGGGTTCTTTTAGGATGT
TTAAGGATTTCGTCGGTGGTAACGGCAACGACCCTTCGGCCACCGGTGTCGACGGCGGCGGCGGAAGCGGGAGGTTTAGAAGGAAAAGAACTTCATCATTGTCAGTTTCT
TCTTATGCAAGATCACACTTCTTGGTGAATATCTATGAGAGCTTTAAACAGGTAGTTTCGTGGAGACTGAAGAACAAAAGATAATCAACTTAAAAAAGCCTTTGCATATG
CTTGAATCTAAAGAAGGATTATGTGTACACATTGGCTAATTGTACTTCATGTTTAGCTTACAACTTAAACTCACTTCTAAATTTAAAAAATTGTATATGTTAAAAAGAAA
ATTTGAGCCTTCATATCTAATTTATATAAACAGAGACATATATTCAAAAATTAAGATCGCGTATCAATTGTTCGTAGAATAAAGTTCACTACTATGGTTCTCACGTATCC
TAAGTAATGTATCGACCATGAAGGCTCAGGTTTTGTGCAAACAAGTCGATTCAACTACCATGAATGAAGTGATCTTGATCCAAGGTAGAGAGTTACAATTTATGAGGTGA
AGTCTTGCC
Protein sequenceShow/hide protein sequence
MCSEPPHTVETTSTPTLPLSSLPPEPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASELLWRVPALRELPPPPRLLNEAKQSTLPSPTTVLDGPERAGDGSKRWGSFRMF
KDFVGGNGNDPSATGVDGGGGSGRFRRKRTSSLSVSSYARSHFLVNIYESFKQVVSWRLKNKR