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Clc01G00540 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G00540
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionNADH-dependent glutamate synthase 1 isoform 1
Genome locationClcChr01:371069..377376
RNA-Seq ExpressionClc01G00540
SyntenyClc01G00540
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145930.2 uncharacterized protein LOC101222729 [Cucumis sativus]1.4e-3088.24Show/hide
Query:  MGVEGHVLKRIPRIKFPERHPK-SSASGSATQSQHNSSTDKDIGYYTLSGSNVPAPPQNTAVGGKASLLPKRTPVSDREIEAILI
        MGVEGHVLKRIPRIKFP+RHPK SS+SGSA QSQHN   DKDIGYY LSGSNVPAPPQN AVGGKASLLPKRTPVSDREIEAIL+
Subjt:  MGVEGHVLKRIPRIKFPERHPK-SSASGSATQSQHNSSTDKDIGYYTLSGSNVPAPPQNTAVGGKASLLPKRTPVSDREIEAILI
XP_008437590.1 PREDICTED: uncharacterized protein LOC103482959 [Cucumis melo]1.7e-3190.59Show/hide
Query:  MGVEGHVLKRIPRIKFPERHPKSS-ASGSATQSQHNSSTDKDIGYYTLSGSNVPAPPQNTAVGGKASLLPKRTPVSDREIEAILI
        MGVEGHVLKRIPRIKFP+RHPKSS  SGSA QSQHNS  DKDIGYY LSGSNVPAPPQNTAVGGKASLLPKRTPVSDREIEAIL+
Subjt:  MGVEGHVLKRIPRIKFPERHPKSS-ASGSATQSQHNSSTDKDIGYYTLSGSNVPAPPQNTAVGGKASLLPKRTPVSDREIEAILI
XP_022158039.1 uncharacterized protein LOC111024619 [Momordica charantia]8.8e-3390.48Show/hide
Query:  MGVEGHVLKRIPRIKFPERHPKSSASGSATQSQHNSSTDKDIGYYTLSGSNVPAPPQNTAVGGKASLLPKRTPVSDREIEAILI
        MGVEGHVLKRIPRIKFPERHPKSSASGSA Q+Q+N ST KDIGYY LSGS+VPAPPQNTAVGGKASLLPKRTPVSDREIEAIL+
Subjt:  MGVEGHVLKRIPRIKFPERHPKSSASGSATQSQHNSSTDKDIGYYTLSGSNVPAPPQNTAVGGKASLLPKRTPVSDREIEAILI
XP_022995845.1 uncharacterized protein LOC111491252 [Cucurbita maxima]1.3e-2883.33Show/hide
Query:  MGVEGHVLKRIPRIKFPERHPKSSASGSATQSQHNSSTDKDIGYYTLSGSNVPAPPQNTAVGGKASLLPKRTPVSDREIEAILI
        MGVEGH+LKRIPRIKFPERHPKSSASGS++QSQ   ST+ ++GYY LSGSNVPAP Q+TAVGGKASLLPKRTPVSDREIEAIL+
Subjt:  MGVEGHVLKRIPRIKFPERHPKSSASGSATQSQHNSSTDKDIGYYTLSGSNVPAPPQNTAVGGKASLLPKRTPVSDREIEAILI
XP_038874479.1 uncharacterized protein LOC120067123 [Benincasa hispida]1.5e-3594.05Show/hide
Query:  MGVEGHVLKRIPRIKFPERHPKSSASGSATQSQHNSSTDKDIGYYTLSGSNVPAPPQNTAVGGKASLLPKRTPVSDREIEAILI
        MG+EGHVLKRIPRIKFPERHPKSSASGSA QSQHN STDKDIGYYTLSGSNVPAPPQN AVGGKASLLPKRTPVSDREIEAIL+
Subjt:  MGVEGHVLKRIPRIKFPERHPKSSASGSATQSQHNSSTDKDIGYYTLSGSNVPAPPQNTAVGGKASLLPKRTPVSDREIEAILI
TrEMBL top hitse value%identityAlignment
A0A0A0KJG5 Uncharacterized protein5.2e-3188.24Show/hide
Query:  MGVEGHVLKRIPRIKFPERHPK-SSASGSATQSQHNSSTDKDIGYYTLSGSNVPAPPQNTAVGGKASLLPKRTPVSDREIEAILI
        MGVEGHVLKRIPRIKFP+RHPK SS+SGSA QSQHN   DKDIGYY LSGSNVPAPPQN AVGGKASLLPKRTPVSDREIEAIL+
Subjt:  MGVEGHVLKRIPRIKFPERHPK-SSASGSATQSQHNSSTDKDIGYYTLSGSNVPAPPQNTAVGGKASLLPKRTPVSDREIEAILI
A0A1S3AV04 uncharacterized protein LOC1034829598.0e-3290.59Show/hide
Query:  MGVEGHVLKRIPRIKFPERHPKSS-ASGSATQSQHNSSTDKDIGYYTLSGSNVPAPPQNTAVGGKASLLPKRTPVSDREIEAILI
        MGVEGHVLKRIPRIKFP+RHPKSS  SGSA QSQHNS  DKDIGYY LSGSNVPAPPQNTAVGGKASLLPKRTPVSDREIEAIL+
Subjt:  MGVEGHVLKRIPRIKFPERHPKSS-ASGSATQSQHNSSTDKDIGYYTLSGSNVPAPPQNTAVGGKASLLPKRTPVSDREIEAILI
A0A2P5DFN9 Uncharacterized protein7.5e-2271.76Show/hide
Query:  MGVEGHVLKRIPRIKFPERHPKSSASGSATQSQHNSSTDKDIGYYTLSGSNVPAPPQNTAVGGKASLLPKRTPVSDREIEAILIS
        MG EG VLKRIPRIKFPERHPK+S+SGSA+Q+Q   S  +D    +   S+VPAPPQNTAVGGKASL P+RTPVSDREIEAIL+S
Subjt:  MGVEGHVLKRIPRIKFPERHPKSSASGSATQSQHNSSTDKDIGYYTLSGSNVPAPPQNTAVGGKASLLPKRTPVSDREIEAILIS
A0A6J1DY89 uncharacterized protein LOC1110246194.3e-3390.48Show/hide
Query:  MGVEGHVLKRIPRIKFPERHPKSSASGSATQSQHNSSTDKDIGYYTLSGSNVPAPPQNTAVGGKASLLPKRTPVSDREIEAILI
        MGVEGHVLKRIPRIKFPERHPKSSASGSA Q+Q+N ST KDIGYY LSGS+VPAPPQNTAVGGKASLLPKRTPVSDREIEAIL+
Subjt:  MGVEGHVLKRIPRIKFPERHPKSSASGSATQSQHNSSTDKDIGYYTLSGSNVPAPPQNTAVGGKASLLPKRTPVSDREIEAILI
A0A6J1K519 uncharacterized protein LOC1114912526.4e-2983.33Show/hide
Query:  MGVEGHVLKRIPRIKFPERHPKSSASGSATQSQHNSSTDKDIGYYTLSGSNVPAPPQNTAVGGKASLLPKRTPVSDREIEAILI
        MGVEGH+LKRIPRIKFPERHPKSSASGS++QSQ   ST+ ++GYY LSGSNVPAP Q+TAVGGKASLLPKRTPVSDREIEAIL+
Subjt:  MGVEGHVLKRIPRIKFPERHPKSSASGSATQSQHNSSTDKDIGYYTLSGSNVPAPPQNTAVGGKASLLPKRTPVSDREIEAILI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G23885.1 unknown protein9.5e-0949.37Show/hide
Query:  HVLKRIPRIKFPERHPKSSASGSATQSQHNSSTDKDIGYYTLSGSNVPAPPQNTAVGGKASLLPKRTPVSDREIEAILI
        H LKRIPRIKFP+RH   SAS   +Q  + +         TL  SN+    + T  GGKAS  PKRTPVS+ E+EAIL+
Subjt:  HVLKRIPRIKFPERHPKSSASGSATQSQHNSSTDKDIGYYTLSGSNVPAPPQNTAVGGKASLLPKRTPVSDREIEAILI
AT5G24165.1 unknown protein1.5e-1457.14Show/hide
Query:  LKRIPRIKFPERHPKSSASGSATQSQHNSSTDKDIGYYTLSGSNVPAPPQNTAVGGKASLLPKRTPVSDREIEAILI
        ++RIPRIKFP+RH  SS SG A  S   S   K++     + S+VPA P+NTA GGKASL PKRTPVSD+EIE+I++
Subjt:  LKRIPRIKFPERHPKSSASGSATQSQHNSSTDKDIGYYTLSGSNVPAPPQNTAVGGKASLLPKRTPVSDREIEAILI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGTAGAAGGTCATGTTTTGAAGCGAATTCCACGCATTAAATTCCCTGAAAGACACCCAAAATCCTCAGCTTCAGGTTCTGCTACCCAGTCTCAACACAACTCCTC
AACAGATAAGGACATTGGTTACTATACACTTTCAGGTTCCAATGTGCCAGCCCCGCCCCAAAACACAGCCGTGGGGGGCAAAGCTTCTCTCCTGCCGAAGCGTACACCTG
TCTCGGACAGAGAGATAGAGGCTATCCTGATATCAGAATCATCTCGATTTCGATTCTCTTCTTGTATGGGACTGTTAAACCCCTGCCCCGGGTTGAGACCTCGAGCAGAG
GTCTTCTGCTTTTTTTCTTGTCTCCTCCTCAGATTGTATCCATCAATGACTCCCTTCATGGAATGTGAAATGAAAACTGGTATGTTCTTAAAAATCTATAAGAAATCCTT
GTCTTTAACCAATAGCTTGGGGCTGGAGCTCCACAAGTTGTAG
mRNA sequenceShow/hide mRNA sequence
TGAATTTCCAGAAAAAACGAAACAAGATCTCAGATTAAAGAAAACAAAGGTCATCAAATTGAGTTTCAGAAATCATATCATCCTAAGATCTGGTTCACAATCTAACCTCG
AAATGTCAGAAATCGTAGCACCGACCGTTTCGTTCCCAATCGCCGTAGCGGGTGGGCTCGGGGCCTTTAGGTCCACCGACCTCGCCGGTCGCTTCTTTTATATCAACTCC
TTCATCTTCACCGTCTCGTTCATCTATGGCAGCCTCGTGTTGATTCGGCAAACTTCCTTTCCCGGCCTCTCGTTGTTCCTCGCTAGACACACCTTGCTCCGATCGAGAAG
GTTGTTGATTGGACGAGGAGCTAACGAGCCGGCTCAACGAGTTGGCAGTCAGGCGACTCGCCGCCGGTAGCGCGGAGAGAGTCGGCGGCGACGAGAATAGACGGCTGAGA
TTGCTCGACATTCTTTGTTACTCGATCGGATCTGCGAACGGGCGGCGGTTGGTGTGTGAGAATATCGTATTTATAGTCCTACGATACGTCATCGTGTCGGACAACAAAAC
CACCACGTGTTATTGTTTCAACGGAGTCAGCCGTAAACTTTTGAAACTTATTTCGTTGCCCTTAATTTTTCTTGAACATTTCGAAATTACCCTTATTCTTGGGGGTGTAA
GTTCGGGATCAAAAAGCCTGTTAATTAAATGCCTGGGATTTATTTGAAGAATTTTGAAGCCTGTTTGTCAACGGTCGATCCCAAAAGTAAACCGACGATTGTTGCCGATG
ACCACTAATAAAGATGTAGTCGTAGGGATGATAAAATTCCCGATGGGTCGAGTCCCGCGGGAAATCCCCGGATTGACCAGCCAAAAATTAAAGTCATTGCTGAAACCCCC
GACGCGGCATTAGAAAGCAAAGTGTAACAGACTTAGAGGAAAGAGTAAAGCAGAGGGAGAAAATGGGAGTAGAAGGTCATGTTTTGAAGCGAATTCCACGCATTAAATTC
CCTGAAAGACACCCAAAATCCTCAGCTTCAGGTTCTGCTACCCAGTCTCAACACAACTCCTCAACAGATAAGGACATTGGTTACTATACACTTTCAGGTTCCAATGTGCC
AGCCCCGCCCCAAAACACAGCCGTGGGGGGCAAAGCTTCTCTCCTGCCGAAGCGTACACCTGTCTCGGACAGAGAGATAGAGGCTATCCTGATATCAGAATCATCTCGAT
TTCGATTCTCTTCTTGTATGGGACTGTTAAACCCCTGCCCCGGGTTGAGACCTCGAGCAGAGGTCTTCTGCTTTTTTTCTTGTCTCCTCCTCAGATTGTATCCATCAATG
ACTCCCTTCATGGAATGTGAAATGAAAACTGGTATGTTCTTAAAAATCTATAAGAAATCCTTGTCTTTAACCAATAGCTTGGGGCTGGAGCTCCACAAGTTGTAG
Protein sequenceShow/hide protein sequence
MGVEGHVLKRIPRIKFPERHPKSSASGSATQSQHNSSTDKDIGYYTLSGSNVPAPPQNTAVGGKASLLPKRTPVSDREIEAILISESSRFRFSSCMGLLNPCPGLRPRAE
VFCFFSCLLLRLYPSMTPFMECEMKTGMFLKIYKKSLSLTNSLGLELHKL