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Clc01G00610 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G00610
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr01:421436..422462
RNA-Seq ExpressionClc01G00610
SyntenyClc01G00610
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016828.1 hypothetical protein SDJN02_21939, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-0532.43Show/hide
Query:  MNEASKALISLEALEMDWQEGFCPWWCMIIDVYICDNNEWFLYIGVRSVSVLQTTVSRCFSAFLLHFCVTCTVHTDIRLGSYANYIGIIQVSGESGQIAA
        MNEASKALISLEALEMDWQE +     + +D  + D                                 +C +                     SG    
Subjt:  MNEASKALISLEALEMDWQEGFCPWWCMIIDVYICDNNEWFLYIGVRSVSVLQTTVSRCFSAFLLHFCVTCTVHTDIRLGSYANYIGIIQVSGESGQIAA

Query:  VWIHAKYQADGSKVSGGLNLPLGCHCSPFSNYNREGRCFDAQLRTCIL
           +  Y   G     G    + CH SPFSNYN E RCFDAQL+TC L
Subjt:  VWIHAKYQADGSKVSGGLNLPLGCHCSPFSNYNREGRCFDAQLRTCIL
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGAAGCCTCCAAGGCTCTCATATCTTTGGAGGCTTTGGAGATGGACTGGCAGGAGGGGTTTTGTCCATGGTGGTGTATGATTATTGATGTATATATCTGTGATAA
CAATGAATGGTTTCTGTATATTGGCGTCCGCTCTGTTTCAGTTTTACAAACTACAGTTAGTCGATGTTTCTCTGCTTTTTTGTTGCATTTCTGTGTTACTTGTACTGTAC
ATACTGATATTCGATTAGGAAGTTATGCAAACTATATTGGAATTATTCAAGTTTCTGGTGAGAGTGGACAAATTGCTGCGGTTTGGATTCATGCAAAATATCAGGCTGAT
GGGTCCAAGGTTTCTGGGGGGCTGAATCTACCATTAGGTTGTCATTGCAGCCCATTTTCAAATTACAACAGAGAAGGGAGATGCTTTGATGCTCAGCTCCGTACCTGCAT
ACTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGAAGCCTCCAAGGCTCTCATATCTTTGGAGGCTTTGGAGATGGACTGGCAGGAGGGGTTTTGTCCATGGTGGTGTATGATTATTGATGTATATATCTGTGATAA
CAATGAATGGTTTCTGTATATTGGCGTCCGCTCTGTTTCAGTTTTACAAACTACAGTTAGTCGATGTTTCTCTGCTTTTTTGTTGCATTTCTGTGTTACTTGTACTGTAC
ATACTGATATTCGATTAGGAAGTTATGCAAACTATATTGGAATTATTCAAGTTTCTGGTGAGAGTGGACAAATTGCTGCGGTTTGGATTCATGCAAAATATCAGGCTGAT
GGGTCCAAGGTTTCTGGGGGGCTGAATCTACCATTAGGTTGTCATTGCAGCCCATTTTCAAATTACAACAGAGAAGGGAGATGCTTTGATGCTCAGCTCCGTACCTGCAT
ACTGTGA
Protein sequenceShow/hide protein sequence
MNEASKALISLEALEMDWQEGFCPWWCMIIDVYICDNNEWFLYIGVRSVSVLQTTVSRCFSAFLLHFCVTCTVHTDIRLGSYANYIGIIQVSGESGQIAAVWIHAKYQAD
GSKVSGGLNLPLGCHCSPFSNYNREGRCFDAQLRTCIL