; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc01G00920 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G00920
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRNA-binding protein pno1-like
Genome locationClcChr01:662530..665072
RNA-Seq ExpressionClc01G00920
SyntenyClc01G00920
Gene Ontology termsGO:0005730 - nucleolus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR004087 - K Homology domain
IPR036612 - K Homology domain, type 1 superfamily
IPR039912 - Pre-rRNA-processing protein PNO1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042585.1 RNA-binding protein pno1-like [Cucumis melo var. makuwa]4.1e-12096.55Show/hide
Query:  GGTQHNSIMQSTEVPISMEVEAVSSKTVTEVGTLPPKPQFDPLKPHEMNDGRIQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKT
        GGTQ N IMQSTEVP+SMEVE VSSKTVTEVGT+PPKPQF+PLKPHEMNDGR+QFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKT
Subjt:  GGTQHNSIMQSTEVPISMEVEAVSSKTVTEVGTLPPKPQFDPLKPHEMNDGRIQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKT

Query:  RADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKI
        RA+TPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKI
Subjt:  RADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKI

Query:  ARDSLCSLILGSPAGKVYSKLRAVTARLAERF
        ARDSLCSLILGSPAGKVYSKLRAVTARLAERF
Subjt:  ARDSLCSLILGSPAGKVYSKLRAVTARLAERF

KAG6577533.1 Gamma-tubulin complex component 2, partial [Cucurbita argyrosperma subsp. sororia]1.2e-11494.35Show/hide
Query:  TQHNSIMQSTEVPISMEVEAVSSKTVTEVGTLPPKPQFDPLKPHEMNDGRIQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRA
        TQHNSIMQSTE   SMEVE VS++T   V TLPPKPQFDPLKPHEMNDGRIQFRKVSVPPHRY+PLKKAWMEIYTPIY+QMKIDIRMNLK RKVELKTRA
Subjt:  TQHNSIMQSTEVPISMEVEAVSSKTVTEVGTLPPKPQFDPLKPHEMNDGRIQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRA

Query:  DTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIAR
        DTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIAR
Subjt:  DTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIAR

Query:  DSLCSLILGSPAGKVYSKLRAVTARLAERF
        DSLCSLILGSPAGKVYSKLRAVTARLAERF
Subjt:  DSLCSLILGSPAGKVYSKLRAVTARLAERF

XP_004145908.1 RNA-binding protein pno1 [Cucumis sativus]1.5e-11797.77Show/hide
Query:  MQSTEVPISMEVEAVSSKTVTEVGTLPPKPQFDPLKPHEMNDGRIQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEVP+SMEVE VSSKTVTE+GTLPPKPQFDPLKPHEMNDGR+QFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPD+S
Subjt:  MQSTEVPISMEVEAVSSKTVTEVGTLPPKPQFDPLKPHEMNDGRIQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

XP_008437547.1 PREDICTED: RNA-binding protein pno1-like [Cucumis melo]1.2e-11697.32Show/hide
Query:  MQSTEVPISMEVEAVSSKTVTEVGTLPPKPQFDPLKPHEMNDGRIQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEVP+SMEVE VSSKTVTEVGT+PPKPQF+PLKPHEMNDGR+QFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRA+TPDIS
Subjt:  MQSTEVPISMEVEAVSSKTVTEVGTLPPKPQFDPLKPHEMNDGRIQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

XP_038874451.1 RNA-binding protein pno1-like [Benincasa hispida]2.5e-11798.21Show/hide
Query:  MQSTEVPISMEVEAVSSKTVTEVGTLPPKPQFDPLKPHEMNDGRIQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEVPISMEVEAVSSKT TEVGTLPPKP+FDPLKPHEMNDGR+QFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKID+RMNLKARKVELKTRADTPDIS
Subjt:  MQSTEVPISMEVEAVSSKTVTEVGTLPPKPQFDPLKPHEMNDGRIQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

TrEMBL top hitse value%identityAlignment
A0A0A0KQC5 KH domain-containing protein7.0e-11897.77Show/hide
Query:  MQSTEVPISMEVEAVSSKTVTEVGTLPPKPQFDPLKPHEMNDGRIQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEVP+SMEVE VSSKTVTE+GTLPPKPQFDPLKPHEMNDGR+QFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPD+S
Subjt:  MQSTEVPISMEVEAVSSKTVTEVGTLPPKPQFDPLKPHEMNDGRIQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A1S3AUA6 RNA-binding protein pno1-like6.0e-11797.32Show/hide
Query:  MQSTEVPISMEVEAVSSKTVTEVGTLPPKPQFDPLKPHEMNDGRIQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEVP+SMEVE VSSKTVTEVGT+PPKPQF+PLKPHEMNDGR+QFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRA+TPDIS
Subjt:  MQSTEVPISMEVEAVSSKTVTEVGTLPPKPQFDPLKPHEMNDGRIQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A5D3C450 RNA-binding protein pno1-like2.0e-12096.55Show/hide
Query:  GGTQHNSIMQSTEVPISMEVEAVSSKTVTEVGTLPPKPQFDPLKPHEMNDGRIQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKT
        GGTQ N IMQSTEVP+SMEVE VSSKTVTEVGT+PPKPQF+PLKPHEMNDGR+QFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKT
Subjt:  GGTQHNSIMQSTEVPISMEVEAVSSKTVTEVGTLPPKPQFDPLKPHEMNDGRIQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKT

Query:  RADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKI
        RA+TPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKI
Subjt:  RADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKI

Query:  ARDSLCSLILGSPAGKVYSKLRAVTARLAERF
        ARDSLCSLILGSPAGKVYSKLRAVTARLAERF
Subjt:  ARDSLCSLILGSPAGKVYSKLRAVTARLAERF

A0A6J1DX80 RNA-binding protein pno1-like7.3e-11595.09Show/hide
Query:  MQSTEVPISMEVEAVSSKTVTEVGTLPPKPQFDPLKPHEMNDGRIQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTE P SMEVEA+S+K +TEVGTLPPKPQFDPLKPHEMNDGR+QFRKVSVPPHRYSPLKKAWMEIYTP+Y+QMKIDIRMNLKARKVELKTR DTPDIS
Subjt:  MQSTEVPISMEVEAVSSKTVTEVGTLPPKPQFDPLKPHEMNDGRIQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFD+IDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A6J1K1S8 RNA-binding protein pno1-like5.6e-11595.98Show/hide
Query:  MQSTEVPISMEVEAVSSKTVTEVGTLPPKPQFDPLKPHEMNDGRIQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEVPISMEVEAV SK++TEVG LPPKP F+PLKPHEMNDGR+QFRKVSVPPHRYSPLKKAWMEIYTPIY+QMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MQSTEVPISMEVEAVSSKTVTEVGTLPPKPQFDPLKPHEMNDGRIQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFD+IDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

SwissProt top hitse value%identityAlignment
A7RP64 RNA-binding protein pno15.1e-6560.2Show/hide
Query:  KPQFDPLKPHEMNDGRIQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVD
        +P F P+K  ++  G+ + RK+ VP HRY+PLK+ WM+I+TP+ + +K+ IR NL +R VE++   +T DI  +QK ADFV AF+LGF+V DA+AL+R+D
Subjt:  KPQFDPLKPHEMNDGRIQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVD

Query:  ELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF
        +L++ESFEI DVK L+G+HLSRAIGR++GK GKTKF IEN TKTRIV+A+TKIHILGSF NIKIAR ++C+LILGSP  KVY  +RAV +R AERF
Subjt:  ELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF

Q29IG6 RNA-binding protein pno18.7e-6566.85Show/hide
Query:  QFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRG
        + RKVSVPPHRYS LK+ WM+I+TP+ + MK+ IR N+KAR+VEL+   +TPDI+NLQK ADFV AF+ GF+V DA+ALLR+++L+VE+FEIKDVKTLRG
Subjt:  QFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRG

Query:  EHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER
        +H SRAIGRL+GK G+TKF IEN TKTRIV+AD+KIHILGS+ NI++AR ++C+LILGSP  KVY  LR+V +RL+ER
Subjt:  EHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER

Q5F414 RNA-binding protein PNO11.6e-6357.62Show/hide
Query:  SSKTVTEVGTLPPK-PQFDPLKPHEMNDGRIQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFML
        ++++    G  P K P F PL    +  G+ + RKV VP +RY+PLK+ WM+I+TPI + +++ IR NLK R VE+KT ++T D+S L K ADFV AF+L
Subjt:  SSKTVTEVGTLPPK-PQFDPLKPHEMNDGRIQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFML

Query:  GFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLR
        GF V DA+AL+R+D+L++ESFE+ DVK L+G+HLSRAIGR++GK GKTKF IEN T+TRIV+AD+KIHILGSF NIK+AR ++C+LILGSP  KVY  +R
Subjt:  GFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLR

Query:  AVTARLAERF
        AV +R AERF
Subjt:  AVTARLAERF

Q6VBQ6 RNA-binding protein PNO11.6e-6359.69Show/hide
Query:  KPQFDPLKPHEMNDGRIQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVD
        +P F P+   ++  G  + RKV+VP HRY+PLK+ W++I+TPI + +++ +R NLK R VE+KT  +T DI+ L K ADF+ AF+LGF V DA+AL+R+D
Subjt:  KPQFDPLKPHEMNDGRIQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVD

Query:  ELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF
        EL++ESF++ DVK L+G+HLSRAIGR++GK GKTKF IEN TKTRIV+ADTKIHILGSF NIK+AR ++C+LILGSP  KVY  +RAV +R AERF
Subjt:  ELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF

Q9VR89 RNA-binding protein pno16.0e-6665.24Show/hide
Query:  PHEMNDGRIQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFE
        P +    R + RKVSVPPHRYS LK+ WM+I+TP+ + MK+ IR N+KAR+VEL+   +TPDI+NLQ+ ADFV AF+ GF+V DA+ALLR+++L+VESFE
Subjt:  PHEMNDGRIQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFE

Query:  IKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER
        IKDVKTLRG+H SRAIGRL+GK G+TKF IEN TKTRIV+AD+KIHILGS+ NI++AR ++C+LILGSP  KVY  LRAV +RL+ER
Subjt:  IKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER

Arabidopsis top hitse value%identityAlignment
AT3G13230.1 RNA-binding KH domain-containing protein4.4e-9681.69Show/hide
Query:  MEVEAVSSKTVTEVGTLPPKPQFDPLKPHEMNDGRIQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFV
        MEVE  +  TV     LPPKP F PLK HEM+DG++QFRK++VPP+RYSPLKKAW++IYTPIYDQMK+DIRMNLKARKVELKTRADTPDISNLQK ADFV
Subjt:  MEVEAVSSKTVTEVGTLPPKPQFDPLKPHEMNDGRIQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFV

Query:  HAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKV
        HAFMLGFD+ DAI+LLR+DELYVESFEIKDVKTL+GEHLSRAIGRLSGK GKTKFAIEN+TKTRIVIADT+IHILG+F+NIK+AR SLCSLI+GSPAGKV
Subjt:  HAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKV

Query:  YSKLRAVTARLAE
        YSKLR+V+ARL E
Subjt:  YSKLRAVTARLAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATATCATCTCACTCTCTTTGTTATCGTTTCATCTCTATGGCATCGTCGCTCTCACGCTAGTCTCACTCTCTCTGCTATTGTTTCGTCTCTCTACTAGTCTCGCTCG
AGAGCAAGACGATATTCGCCGAAAAGTCAAAATACACGCTAACTTTCGGGAAATTTGGGCATTCTGTCACTTTTTCCGTAAGATTTCCTGTAAGATCATCACTCCATTTT
CTAGCCTCACTGAGCGGCGGCTCTCCCATTCAAGCTTTACCGGACACCATTCTGTGACGCTTGCGTTCTCCCCTCAACATCTCATCCGCCCTCGTTTCTCACCGTTGCAG
GGTGGAACTCAGCACAATTCCATAATGCAGTCTACTGAAGTTCCCATTTCCATGGAAGTGGAAGCAGTTTCAAGTAAAACGGTAACTGAAGTTGGCACCTTGCCACCAAA
ACCGCAGTTTGATCCTCTAAAGCCTCATGAGATGAATGATGGCCGAATTCAGTTCCGAAAGGTATCTGTTCCTCCACATCGATATTCCCCTCTCAAGAAAGCATGGATGG
AGATCTACACCCCAATATATGATCAAATGAAAATTGACATCCGTATGAACCTCAAGGCTCGTAAAGTTGAACTGAAAACAAGAGCAGACACACCTGACATCAGTAACTTG
CAAAAGTGTGCAGATTTTGTTCATGCCTTCATGCTTGGTTTTGATGTAATTGATGCCATTGCACTCTTACGAGTGGATGAACTCTACGTAGAATCTTTTGAGATCAAAGA
TGTTAAGACGCTTCGAGGCGAGCATTTGTCCCGTGCCATAGGCAGATTGTCTGGTAAAGCTGGTAAAACGAAGTTCGCAATTGAAAATGCTACGAAGACGAGGATAGTTA
TTGCAGACACCAAGATTCACATATTAGGATCCTTTGCCAACATCAAGATTGCTAGAGATTCTCTTTGCAGCCTCATTTTAGGTTCTCCAGCTGGAAAAGTTTATTCAAAA
CTAAGAGCAGTTACAGCCAGATTGGCAGAAAGGTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATATCATCTCACTCTCTTTGTTATCGTTTCATCTCTATGGCATCGTCGCTCTCACGCTAGTCTCACTCTCTCTGCTATTGTTTCGTCTCTCTACTAGTCTCGCTCG
AGAGCAAGACGATATTCGCCGAAAAGTCAAAATACACGCTAACTTTCGGGAAATTTGGGCATTCTGTCACTTTTTCCGTAAGATTTCCTGTAAGATCATCACTCCATTTT
CTAGCCTCACTGAGCGGCGGCTCTCCCATTCAAGCTTTACCGGACACCATTCTGTGACGCTTGCGTTCTCCCCTCAACATCTCATCCGCCCTCGTTTCTCACCGTTGCAG
GGTGGAACTCAGCACAATTCCATAATGCAGTCTACTGAAGTTCCCATTTCCATGGAAGTGGAAGCAGTTTCAAGTAAAACGGTAACTGAAGTTGGCACCTTGCCACCAAA
ACCGCAGTTTGATCCTCTAAAGCCTCATGAGATGAATGATGGCCGAATTCAGTTCCGAAAGGTATCTGTTCCTCCACATCGATATTCCCCTCTCAAGAAAGCATGGATGG
AGATCTACACCCCAATATATGATCAAATGAAAATTGACATCCGTATGAACCTCAAGGCTCGTAAAGTTGAACTGAAAACAAGAGCAGACACACCTGACATCAGTAACTTG
CAAAAGTGTGCAGATTTTGTTCATGCCTTCATGCTTGGTTTTGATGTAATTGATGCCATTGCACTCTTACGAGTGGATGAACTCTACGTAGAATCTTTTGAGATCAAAGA
TGTTAAGACGCTTCGAGGCGAGCATTTGTCCCGTGCCATAGGCAGATTGTCTGGTAAAGCTGGTAAAACGAAGTTCGCAATTGAAAATGCTACGAAGACGAGGATAGTTA
TTGCAGACACCAAGATTCACATATTAGGATCCTTTGCCAACATCAAGATTGCTAGAGATTCTCTTTGCAGCCTCATTTTAGGTTCTCCAGCTGGAAAAGTTTATTCAAAA
CTAAGAGCAGTTACAGCCAGATTGGCAGAAAGGTTTTGA
Protein sequenceShow/hide protein sequence
MNIISLSLLSFHLYGIVALTLVSLSLLLFRLSTSLAREQDDIRRKVKIHANFREIWAFCHFFRKISCKIITPFSSLTERRLSHSSFTGHHSVTLAFSPQHLIRPRFSPLQ
GGTQHNSIMQSTEVPISMEVEAVSSKTVTEVGTLPPKPQFDPLKPHEMNDGRIQFRKVSVPPHRYSPLKKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNL
QKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSK
LRAVTARLAERF