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Clc01G01460 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G01460
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionAvr9/Cf-9 rapidly elicited protein
Genome locationClcChr01:1242755..1246135
RNA-Seq ExpressionClc01G01460
SyntenyClc01G01460
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042638.1 uncharacterized protein E6C27_scaffold44G001360 [Cucumis melo var. makuwa]6.8e-2175.29Show/hide
Query:  MNSMFSFFDAFAAELLLG-KFVRDSSSVPSFTPNNGGSASSAASASPKSLPN-KKEEANSKNSSMKPRFALELDGLNCFETLVPN
        MNSMFS FDAFAAE LLG  FVR SSS+PSFTPNN  + ++A+SA PK LP+ KKEE   KNSS+KPRFALELDGLNCFETLVPN
Subjt:  MNSMFSFFDAFAAELLLG-KFVRDSSSVPSFTPNNGGSASSAASASPKSLPN-KKEEANSKNSSMKPRFALELDGLNCFETLVPN

KAG6579594.1 hypothetical protein SDJN03_24042, partial [Cucurbita argyrosperma subsp. sororia]3.0e-2479.31Show/hide
Query:  MNSMFSFFDAFAAELLLGKFVRDSSSVPSFTPNNGGSASSAASASPKSLPNKKEEAN----SKNSSMKPRFALELDGLNCFETLVPN
        MNSMFSFFDAFAAE+LLGKFV  S+SVPSFTPN GG   SA+SA  KS+P KKEEAN    SKNS MKPRFALELDGLNCFETLVPN
Subjt:  MNSMFSFFDAFAAELLLGKFVRDSSSVPSFTPNNGGSASSAASASPKSLPNKKEEAN----SKNSSMKPRFALELDGLNCFETLVPN

XP_011654674.1 uncharacterized protein LOC105435432 [Cucumis sativus]6.2e-2277.38Show/hide
Query:  MNSMFSFFDAFAAELLLGKFVRDSSSVPSFTPNNGGSASSAASASPKSLPNKK-EEANSKNSSMKPRFALELDGLNCFETLVPN
        MNSMFS FDAFAAE LLG FVR SSSVPSFTPNN    ++A+ A PK LP+KK EE  SKNS MKPRFALELDGLNCFETLVPN
Subjt:  MNSMFSFFDAFAAELLLGKFVRDSSSVPSFTPNNGGSASSAASASPKSLPNKK-EEANSKNSSMKPRFALELDGLNCFETLVPN

XP_022929066.1 uncharacterized protein LOC111435766 [Cucurbita moschata]3.0e-2479.31Show/hide
Query:  MNSMFSFFDAFAAELLLGKFVRDSSSVPSFTPNNGGSASSAASASPKSLPNKKEEAN----SKNSSMKPRFALELDGLNCFETLVPN
        MNSMFSFFDAFAAE+LLGKFV  S+SVPSFTPN GG   SA+SA  KS+P KKEEAN    SKNS MKPRFALELDGLNCFETLVPN
Subjt:  MNSMFSFFDAFAAELLLGKFVRDSSSVPSFTPNNGGSASSAASASPKSLPNKKEEAN----SKNSSMKPRFALELDGLNCFETLVPN

XP_023522684.1 uncharacterized protein LOC111786686 [Cucurbita pepo subsp. pepo]2.3e-2478.16Show/hide
Query:  MNSMFSFFDAFAAELLLGKFVRDSSSVPSFTPNNGGSASSAASASPKSLPNKKEEAN----SKNSSMKPRFALELDGLNCFETLVPN
        MNSMFSFFDAFAAE+L+GKFV  S+SVPSFTPN GG   SA+SA  KS+P KK+EAN    SKNSSMKPRFALELDGLNCFETLVPN
Subjt:  MNSMFSFFDAFAAELLLGKFVRDSSSVPSFTPNNGGSASSAASASPKSLPNKKEEAN----SKNSSMKPRFALELDGLNCFETLVPN

TrEMBL top hitse value%identityAlignment
A0A0A0KJT8 Uncharacterized protein3.0e-2277.38Show/hide
Query:  MNSMFSFFDAFAAELLLGKFVRDSSSVPSFTPNNGGSASSAASASPKSLPNKK-EEANSKNSSMKPRFALELDGLNCFETLVPN
        MNSMFS FDAFAAE LLG FVR SSSVPSFTPNN    ++A+ A PK LP+KK EE  SKNS MKPRFALELDGLNCFETLVPN
Subjt:  MNSMFSFFDAFAAELLLGKFVRDSSSVPSFTPNNGGSASSAASASPKSLPNKK-EEANSKNSSMKPRFALELDGLNCFETLVPN

A0A178WK55 Uncharacterized protein8.8e-0651.19Show/hide
Query:  MNSMFSFFDAFAAELLLGKFVRDSSSVPSFTPNNGGSASSAASASPKSLPNKKEEANSKNSSM---KPRFALELDGLNCFETLV
        MNSMFS FDA  AE ++GK V  +S V   +  N  S+SS+      SL  KK+E  SKN  +    PRFALELDGL+CFET+V
Subjt:  MNSMFSFFDAFAAELLLGKFVRDSSSVPSFTPNNGGSASSAASASPKSLPNKKEEANSKNSSM---KPRFALELDGLNCFETLV

A0A5D3C6N3 Uncharacterized protein3.3e-2175.29Show/hide
Query:  MNSMFSFFDAFAAELLLG-KFVRDSSSVPSFTPNNGGSASSAASASPKSLPN-KKEEANSKNSSMKPRFALELDGLNCFETLVPN
        MNSMFS FDAFAAE LLG  FVR SSS+PSFTPNN  + ++A+SA PK LP+ KKEE   KNSS+KPRFALELDGLNCFETLVPN
Subjt:  MNSMFSFFDAFAAELLLG-KFVRDSSSVPSFTPNNGGSASSAASASPKSLPN-KKEEANSKNSSMKPRFALELDGLNCFETLVPN

A0A6J1E0L6 uncharacterized protein LOC1110260663.8e-0954.88Show/hide
Query:  MNSMFSFFDAFAAELLLGKFVRDSSSVPSFTPNNGGSASSAASASPKSLPNKKEEANSKNSSMK-PRFALELDGLNCFETLV
        MNSMFS FDAFAAELL+ K  R SS   SF PNNG   S  +  S  +  N ++  ++KNS ++ PR A E DGLNCFETLV
Subjt:  MNSMFSFFDAFAAELLLGKFVRDSSSVPSFTPNNGGSASSAASASPKSLPNKKEEANSKNSSMK-PRFALELDGLNCFETLV

A0A6J1EM23 uncharacterized protein LOC1114357661.4e-2479.31Show/hide
Query:  MNSMFSFFDAFAAELLLGKFVRDSSSVPSFTPNNGGSASSAASASPKSLPNKKEEAN----SKNSSMKPRFALELDGLNCFETLVPN
        MNSMFSFFDAFAAE+LLGKFV  S+SVPSFTPN GG   SA+SA  KS+P KKEEAN    SKNS MKPRFALELDGLNCFETLVPN
Subjt:  MNSMFSFFDAFAAELLLGKFVRDSSSVPSFTPNNGGSASSAASASPKSLPNKKEEAN----SKNSSMKPRFALELDGLNCFETLVPN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G32920.1 unknown protein4.6e-0746.43Show/hide
Query:  MNSMFSFFDAFAAELLLGKFVRDSSSVPSFTPNNGGSASSAASASPKSLPNKKEEANSKNSSMK---PRFALELDGLNCFETLV
        MNSMFS FDA  AE ++GK +  S    SFT     +A++  +A+P++   +K  A+SK   +    PRFALELDGL+CFET+V
Subjt:  MNSMFSFFDAFAAELLLGKFVRDSSSVPSFTPNNGGSASSAASASPKSLPNKKEEANSKNSSMK---PRFALELDGLNCFETLV

AT1G32928.1 unknown protein1.7e-0951.19Show/hide
Query:  MNSMFSFFDAFAAELLLGKFVRDSSSVPSFTPNNGGSASSAASASPKSLPNKKEEANSKNSSM---KPRFALELDGLNCFETLV
        MNSMFS FDA  AE ++GK V  +S V   +  N  S+SS+      SL  KK+E  SKN  +    PRFALELDGL+CFET+V
Subjt:  MNSMFSFFDAFAAELLLGKFVRDSSSVPSFTPNNGGSASSAASASPKSLPNKKEEANSKNSSM---KPRFALELDGLNCFETLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCCATGTTCAGTTTCTTCGATGCCTTCGCCGCCGAATTGCTCCTCGGCAAATTCGTTAGGGATTCTTCCTCTGTTCCTTCCTTCACTCCTAACAACGGCGGCTC
CGCCTCTTCCGCCGCTTCCGCCTCCCCGAAGTCGCTGCCGAACAAGAAAGAAGAAGCTAATTCCAAGAATTCGTCGATGAAGCCGAGATTTGCTCTGGAGTTAGATGGCC
TCAATTGCTTCGAGACTCTCGTCCCGAATTGA
mRNA sequenceShow/hide mRNA sequence
GAAACTTCTAGGAATTTGAAATCCTCAAACAAGGAAGGAATTCCTTATAAAATCCCCTTCTCATTCCTCAACTCTCACCAAACTCCTCACCAACAAACTCTCAATCCAAA
CAACAATTCAAGAAATTCAACCAATTTTCAGAAGAAGATGAATTCCATGTTCAGTTTCTTCGATGCCTTCGCCGCCGAATTGCTCCTCGGCAAATTCGTTAGGGATTCTT
CCTCTGTTCCTTCCTTCACTCCTAACAACGGCGGCTCCGCCTCTTCCGCCGCTTCCGCCTCCCCGAAGTCGCTGCCGAACAAGAAAGAAGAAGCTAATTCCAAGAATTCG
TCGATGAAGCCGAGATTTGCTCTGGAGTTAGATGGCCTCAATTGCTTCGAGACTCTCGTCCCGAATTGAGGTGGGGTGAAAAGTCACATTATCATGATTTTCGAGTTGTT
GAGGCATTCTATCAGATTCAACCTTTTAACAATTTGTTGAATATATCTAAGGTGAGTTTTTTTCCTCTGGCAATCTATGTATATCTTGATTGACAATGTATAGGGATGGT
TCTAGTAGTTCGAATATGATTAAGATTGTTGAAGGCAAGGATATTTCATGATTGATGACAGTTTTATCTAACTCCCCATAATGATTTATGTGTAGTGATTGACCACACCT
CTTCTAGTAATTCGATTTCTAGAAATATAATGTATTTCAATAATGAGTTAGTAGGAACAAATCCTTCTCTCCAACCTTTTGAGCCTATTTATGAAATTATTGATTTTCAA
AATTTTGAGTCTTGTCAATCTGGTATTTTCATTAAAGAAAGTCTGTATTAGTAAATGGCTAGGATGATTTACTTTTGCCCTTTTCTACCCAAAGATAGTTTGTGTAAACC
CTAATTTATTTTGATTTGAAATATTTGTTTTAGTTTTGAATTAATTTCTTTTAATTGAAACTTTGTTTAACGTGATGATAATTACTTATGAGTAGATAAGATATTTGTCA
TAATACATTGCACAACATGATAATTATGTGGGTAGAGTGTATTTGTAATTTTTGGAATGATTTTGAAACCTTCTACCTCCTTATTAAAACGTTACCTATGGGGTTTATTG
GGGTAATTTTGGCAATTTCTACTTATTATTTTAATCATTTG
Protein sequenceShow/hide protein sequence
MNSMFSFFDAFAAELLLGKFVRDSSSVPSFTPNNGGSASSAASASPKSLPNKKEEANSKNSSMKPRFALELDGLNCFETLVPN