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Clc01G01470 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G01470
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr01:1252885..1253208
RNA-Seq ExpressionClc01G01470
SyntenyClc01G01470
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042639.1 uncharacterized protein E6C27_scaffold44G001370 [Cucumis melo var. makuwa]2.0e-0985.71Show/hide
Query:  MKGSCTLLASVLAASTMAFSSSSSSSSTGDRDLALYPPSQQVLSPLPSI
        MKGSCTLLASVLAASTMAF  SSSSSSTGDRDL LYPPS Q LSP PS+
Subjt:  MKGSCTLLASVLAASTMAFSSSSSSSSTGDRDLALYPPSQQVLSPLPSI

KAE8647827.1 hypothetical protein Csa_000617 [Cucumis sativus]5.2e-0586.05Show/hide
Query:  MKGSCTLLASVLAASTMAFSSSSSSSS--TGDRDLALYPPSQQ
        MKGSCTLLASVLAASTMAFSSSSSSSS  TGDRDL LY  S Q
Subjt:  MKGSCTLLASVLAASTMAFSSSSSSSS--TGDRDLALYPPSQQ

KAG6605612.1 Granule-bound starch synthase 1, chloroplastic/amyloplastic, partial [Cucurbita argyrosperma subsp. sororia]2.8e-0694.87Show/hide
Query:  MKGSCTLLASVLAASTMAFSSSSSSSSTGDRDLALYPPS
        MKG+CTLLASVLAASTMAFSSSSSSSS GDRDLALYPPS
Subjt:  MKGSCTLLASVLAASTMAFSSSSSSSSTGDRDLALYPPS

KAG7035524.1 hypothetical protein SDJN02_02320 [Cucurbita argyrosperma subsp. argyrosperma]2.8e-0694.87Show/hide
Query:  MKGSCTLLASVLAASTMAFSSSSSSSSTGDRDLALYPPS
        MKG+CTLLASVLAASTMAFSSSSSSSS GDRDLALYPPS
Subjt:  MKGSCTLLASVLAASTMAFSSSSSSSSTGDRDLALYPPS

XP_008437456.1 PREDICTED: uncharacterized protein LOC103482871 [Cucumis melo]1.2e-0684.44Show/hide
Query:  MKGSCTLLASVLAASTMAFSSSSSSSSTGDRDLALYPPSQQVLSP
        MKGSCTLLASVLAASTMAF  SSSSSSTGDRDL LYPPS Q   P
Subjt:  MKGSCTLLASVLAASTMAFSSSSSSSSTGDRDLALYPPSQQVLSP

TrEMBL top hitse value%identityAlignment
A0A0A0KQK5 Uncharacterized protein2.5e-0586.05Show/hide
Query:  MKGSCTLLASVLAASTMAFSSSSSSSS--TGDRDLALYPPSQQ
        MKGSCTLLASVLAASTMAFSSSSSSSS  TGDRDL LY  S Q
Subjt:  MKGSCTLLASVLAASTMAFSSSSSSSS--TGDRDLALYPPSQQ

A0A1S3AU25 uncharacterized protein LOC1034828716.0e-0784.44Show/hide
Query:  MKGSCTLLASVLAASTMAFSSSSSSSSTGDRDLALYPPSQQVLSP
        MKGSCTLLASVLAASTMAF  SSSSSSTGDRDL LYPPS Q   P
Subjt:  MKGSCTLLASVLAASTMAFSSSSSSSSTGDRDLALYPPSQQVLSP

A0A5A7TMP9 Uncharacterized protein9.9e-1085.71Show/hide
Query:  MKGSCTLLASVLAASTMAFSSSSSSSSTGDRDLALYPPSQQVLSPLPSI
        MKGSCTLLASVLAASTMAF  SSSSSSTGDRDL LYPPS Q LSP PS+
Subjt:  MKGSCTLLASVLAASTMAFSSSSSSSSTGDRDLALYPPSQQVLSPLPSI

A0A6J1ET49 uncharacterized protein LOC1114357564.3e-0585.37Show/hide
Query:  MKGSCTLLASVLAASTMAFSSSSSSSSTGDRDLALYPPSQQ
        MKGSCTLLASVLAASTMAFSSSSSSS+  DRDLAL PPS++
Subjt:  MKGSCTLLASVLAASTMAFSSSSSSSSTGDRDLALYPPSQQ

A0A6J1HZR1 uncharacterized protein LOC1114691104.3e-0585.37Show/hide
Query:  MKGSCTLLASVLAASTMAFSSSSSSSSTGDRDLALYPPSQQ
        MKGSCTLLASVLAASTMAFSSSSSSS+  DRDLAL PPS++
Subjt:  MKGSCTLLASVLAASTMAFSSSSSSSSTGDRDLALYPPSQQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGGCTCCTGCACGTTGCTCGCCTCCGTCCTCGCTGCCTCCACCATGGCTTTCTCCTCTTCTTCTTCCTCCTCCTCCACTGGAGATCGCGACCTCGCTCTTTATCC
TCCCTCTCAACAGGTATTATCACCATTGCCTTCGATTTTGAATGTTCCTTTTTCGATTCTGAGGAATTTTGATGACCTAATCGGTTTTTTTTCTTTGATTTGGTGGATTG
TGTTTCTTTCTAGGGCTTCGTTTCGGAATCTGGTGCGAATAGAGGTTGCGGCTCGGATTCTTCGTCGGAGAAGGAGAAATTTGCGCCGAGGTTTGATGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGGCTCCTGCACGTTGCTCGCCTCCGTCCTCGCTGCCTCCACCATGGCTTTCTCCTCTTCTTCTTCCTCCTCCTCCACTGGAGATCGCGACCTCGCTCTTTATCC
TCCCTCTCAACAGGTATTATCACCATTGCCTTCGATTTTGAATGTTCCTTTTTCGATTCTGAGGAATTTTGATGACCTAATCGGTTTTTTTTCTTTGATTTGGTGGATTG
TGTTTCTTTCTAGGGCTTCGTTTCGGAATCTGGTGCGAATAGAGGTTGCGGCTCGGATTCTTCGTCGGAGAAGGAGAAATTTGCGCCGAGGTTTGATGGATTGA
Protein sequenceShow/hide protein sequence
MKGSCTLLASVLAASTMAFSSSSSSSSTGDRDLALYPPSQQVLSPLPSILNVPFSILRNFDDLIGFFSLIWWIVFLSRASFRNLVRIEVAARILRRRRRNLRRGLMD