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Clc01G01730 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G01730
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr01:1578339..1583573
RNA-Seq ExpressionClc01G01730
SyntenyClc01G01730
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035504.1 hypothetical protein SDJN02_02300 [Cucurbita argyrosperma subsp. argyrosperma]7.5e-2060.64Show/hide
Query:  MGGAQAIRRIPRIKFPKRHPNPSEVVNTEESFTGSTSKTPSTSRGDDQIFFSSSEQTASKTVGGKASLQPKRTPLSNEEIEAILLQFLNLNHSM
        MGGAQA++RIPRIKFPKRHPNPS          GSTS+TP++   DDQ+ F S  + ASKT+GGKASLQPKRTP+SNEEIEAIL+ +++ +  +
Subjt:  MGGAQAIRRIPRIKFPKRHPNPSEVVNTEESFTGSTSKTPSTSRGDDQIFFSSSEQTASKTVGGKASLQPKRTPLSNEEIEAILLQFLNLNHSM

XP_004143853.1 uncharacterized protein LOC101205349 [Cucumis sativus]3.1e-2174.12Show/hide
Query:  MGGAQAIRRIPRIKFPKRHPNPSEVVNTEESFTGSTSKTPSTSRGDDQIFFSSSEQTASKTVGGKASLQPKRTPLSNEEIEAILL
        MGGAQAI+RIPRIKFPKRH + S          GSTSKTPS+  GDD +FFSS E+ ASKTVGGKASLQPKRTPLSNEEIEAILL
Subjt:  MGGAQAIRRIPRIKFPKRHPNPSEVVNTEESFTGSTSKTPSTSRGDDQIFFSSSEQTASKTVGGKASLQPKRTPLSNEEIEAILL

XP_008437426.1 PREDICTED: uncharacterized protein LOC103482844 [Cucumis melo]4.7e-2275.29Show/hide
Query:  MGGAQAIRRIPRIKFPKRHPNPSEVVNTEESFTGSTSKTPSTSRGDDQIFFSSSEQTASKTVGGKASLQPKRTPLSNEEIEAILL
        MGGAQAI+RIPRIKFPKRHP+ S          GSTSKTPS++ GDD IFFSS E+ ASKTVGGKASLQPKR PLSNEEIEAILL
Subjt:  MGGAQAIRRIPRIKFPKRHPNPSEVVNTEESFTGSTSKTPSTSRGDDQIFFSSSEQTASKTVGGKASLQPKRTPLSNEEIEAILL

XP_023534508.1 uncharacterized protein LOC111796047 [Cucurbita pepo subsp. pepo]4.4e-2068.24Show/hide
Query:  MGGAQAIRRIPRIKFPKRHPNPSEVVNTEESFTGSTSKTPSTSRGDDQIFFSSSEQTASKTVGGKASLQPKRTPLSNEEIEAILL
        MGGAQA++RIPRIKFPKRHPNPS          GSTS+TP++   DDQ+ F S  + ASKT+GGKASLQPKRTP+SNEEIEAILL
Subjt:  MGGAQAIRRIPRIKFPKRHPNPSEVVNTEESFTGSTSKTPSTSRGDDQIFFSSSEQTASKTVGGKASLQPKRTPLSNEEIEAILL

XP_038875405.1 uncharacterized protein LOC120067868 [Benincasa hispida]2.7e-2582.35Show/hide
Query:  MGGAQAIRRIPRIKFPKRHPNPSEVVNTEESFTGSTSKTPSTSRGDDQIFFSSSEQTASKTVGGKASLQPKRTPLSNEEIEAILL
        MGGAQAI+RIPRIKFPKRHPNPS          GSTSKTPS+S  DDQIFFSS EQTASKTVGGKASLQPKRTPLSNEEIEAILL
Subjt:  MGGAQAIRRIPRIKFPKRHPNPSEVVNTEESFTGSTSKTPSTSRGDDQIFFSSSEQTASKTVGGKASLQPKRTPLSNEEIEAILL

TrEMBL top hitse value%identityAlignment
A0A0A0KMD8 Uncharacterized protein1.5e-2174.12Show/hide
Query:  MGGAQAIRRIPRIKFPKRHPNPSEVVNTEESFTGSTSKTPSTSRGDDQIFFSSSEQTASKTVGGKASLQPKRTPLSNEEIEAILL
        MGGAQAI+RIPRIKFPKRH + S          GSTSKTPS+  GDD +FFSS E+ ASKTVGGKASLQPKRTPLSNEEIEAILL
Subjt:  MGGAQAIRRIPRIKFPKRHPNPSEVVNTEESFTGSTSKTPSTSRGDDQIFFSSSEQTASKTVGGKASLQPKRTPLSNEEIEAILL

A0A1S3AUJ6 uncharacterized protein LOC1034828442.3e-2275.29Show/hide
Query:  MGGAQAIRRIPRIKFPKRHPNPSEVVNTEESFTGSTSKTPSTSRGDDQIFFSSSEQTASKTVGGKASLQPKRTPLSNEEIEAILL
        MGGAQAI+RIPRIKFPKRHP+ S          GSTSKTPS++ GDD IFFSS E+ ASKTVGGKASLQPKR PLSNEEIEAILL
Subjt:  MGGAQAIRRIPRIKFPKRHPNPSEVVNTEESFTGSTSKTPSTSRGDDQIFFSSSEQTASKTVGGKASLQPKRTPLSNEEIEAILL

A0A6J1DS43 uncharacterized protein LOC1110233421.2e-1868.24Show/hide
Query:  MGGAQAIRRIPRIKFPKRHPNPSEVVNTEESFTGSTSKTPSTSRGDDQIFFSSSEQTASKTVGGKASLQPKRTPLSNEEIEAILL
        MGGAQAI+RIPRIKFPKRHPNPS          GSTS+TPS    DDQ+ FS+      KTVGGKASLQPKRTP+SNEEIEA+LL
Subjt:  MGGAQAIRRIPRIKFPKRHPNPSEVVNTEESFTGSTSKTPSTSRGDDQIFFSSSEQTASKTVGGKASLQPKRTPLSNEEIEAILL

A0A6J1H0Q6 uncharacterized protein LOC1114593632.4e-1967.06Show/hide
Query:  MGGAQAIRRIPRIKFPKRHPNPSEVVNTEESFTGSTSKTPSTSRGDDQIFFSSSEQTASKTVGGKASLQPKRTPLSNEEIEAILL
        MG AQA++RIPRIKFPKRHPNPS          GSTS+TP++   DDQ+ F S  + ASKT+GGKASLQPKRTP+SNEEIEAILL
Subjt:  MGGAQAIRRIPRIKFPKRHPNPSEVVNTEESFTGSTSKTPSTSRGDDQIFFSSSEQTASKTVGGKASLQPKRTPLSNEEIEAILL

A0A6J1K8D8 uncharacterized protein LOC1114915852.4e-1967.06Show/hide
Query:  MGGAQAIRRIPRIKFPKRHPNPSEVVNTEESFTGSTSKTPSTSRGDDQIFFSSSEQTASKTVGGKASLQPKRTPLSNEEIEAILL
        MG AQA++RIPRIKFPKRHPNPS          GSTS+TP++   DDQ+ F S  + ASKT+GGKASLQPKRTP+SNEEIEAILL
Subjt:  MGGAQAIRRIPRIKFPKRHPNPSEVVNTEESFTGSTSKTPSTSRGDDQIFFSSSEQTASKTVGGKASLQPKRTPLSNEEIEAILL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G23885.1 unknown protein5.2e-1147.06Show/hide
Query:  MGGAQAIRRIPRIKFPKRHPNPSEVVNTEESFTGSTSKTPSTSRGDDQIFFSSSEQTASKTVGGKASLQPKRTPLSNEEIEAILL
        M     ++RIPRIKFP+RH NP            S S+  S    +    F S+     KT GGKAS QPKRTP+SNEE+EAILL
Subjt:  MGGAQAIRRIPRIKFPKRHPNPSEVVNTEESFTGSTSKTPSTSRGDDQIFFSSSEQTASKTVGGKASLQPKRTPLSNEEIEAILL

AT5G24165.1 unknown protein3.5e-0746.91Show/hide
Query:  IRRIPRIKFPKRHPNPSEVVNTEESFTGSTSKTPSTSRGDDQIFFSSSEQTASKTV--GGKASLQPKRTPLSNEEIEAILL
        +RRIPRIKFP+RH   S          GS     S S     +  SS    A K    GGKASLQPKRTP+S++EIE+I+L
Subjt:  IRRIPRIKFPKRHPNPSEVVNTEESFTGSTSKTPSTSRGDDQIFFSSSEQTASKTV--GGKASLQPKRTPLSNEEIEAILL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACGGCGGAGGCGGACTGGGACGACAAGACAACGCTGTGATTGTTTGGCGGCGGAGCGGAGAATCTCCGGTGTGATAACTTTTTGGGATGTTTCTTGCAGTAGAGA
CGCCATTGTCGATCACGACGTCAAGTTGCACCGTATTGGTTCCCTCCGTCGCCATTTGCTTGAAATCGCCGTCACTTTCACGAAGATCTTCCTCAACCATCTGCGCAGAC
TGATCCCACAGAACCCCACCAACAAAACCGACCCATCGGCGATCGATATGGGTGGAGCCCAGGCCATCAGAAGGATTCCTCGCATCAAGTTCCCCAAACGACATCCCAAC
CCCTCTGAAGTAGTCAATACTGAAGAAAGTTTTACAGGTTCCACTTCCAAGACTCCATCAACCAGTCGGGGGGATGATCAAATTTTCTTCTCATCTTCAGAACAAACTGC
CTCCAAAACTGTTGGAGGAAAAGCCTCCCTTCAGCCTAAAAGGACACCCTTATCCAATGAGGAGATTGAGGCTATTTTGTTACAATTTTTGAACTTGAATCATAGCATGT
CATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCACGGCGGAGGCGGACTGGGACGACAAGACAACGCTGTGATTGTTTGGCGGCGGAGCGGAGAATCTCCGGTGTGATAACTTTTTGGGATGTTTCTTGCAGTAGAGA
CGCCATTGTCGATCACGACGTCAAGTTGCACCGTATTGGTTCCCTCCGTCGCCATTTGCTTGAAATCGCCGTCACTTTCACGAAGATCTTCCTCAACCATCTGCGCAGAC
TGATCCCACAGAACCCCACCAACAAAACCGACCCATCGGCGATCGATATGGGTGGAGCCCAGGCCATCAGAAGGATTCCTCGCATCAAGTTCCCCAAACGACATCCCAAC
CCCTCTGAAGTAGTCAATACTGAAGAAAGTTTTACAGGTTCCACTTCCAAGACTCCATCAACCAGTCGGGGGGATGATCAAATTTTCTTCTCATCTTCAGAACAAACTGC
CTCCAAAACTGTTGGAGGAAAAGCCTCCCTTCAGCCTAAAAGGACACCCTTATCCAATGAGGAGATTGAGGCTATTTTGTTACAATTTTTGAACTTGAATCATAGCATGT
CATAA
Protein sequenceShow/hide protein sequence
MARRRRTGTTRQRCDCLAAERRISGVITFWDVSCSRDAIVDHDVKLHRIGSLRRHLLEIAVTFTKIFLNHLRRLIPQNPTNKTDPSAIDMGGAQAIRRIPRIKFPKRHPN
PSEVVNTEESFTGSTSKTPSTSRGDDQIFFSSSEQTASKTVGGKASLQPKRTPLSNEEIEAILLQFLNLNHSMS