; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc01G01840 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G01840
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRING-type domain-containing protein
Genome locationClcChr01:1669139..1672117
RNA-Seq ExpressionClc01G01840
SyntenyClc01G01840
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0016874 - ligase activity (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579565.1 30S ribosomal protein S6 alpha, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]8.8e-9790.14Show/hide
Query:  PQTPSPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSS---PPILPTTSNTLTLYVTTACQVDLKADNPIDKLPKIQFNEE
        PQTP+PPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSS   PPILPTTSNTLTLYVTTACQVDLKADNP+DKLPKI FNEE
Subjt:  PQTPSPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSS---PPILPTTSNTLTLYVTTACQVDLKADNPIDKLPKIQFNEE

Query:  LRTRDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLISNSTCPLCRCSVIPTTRCSDPPIIAPPPPPPPPLAGSAELPLTSNQTAEMGSYSLQHLQ
        LRTRDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWL SNSTCPLCRCSVIPTTRC DPP++  PPPPPP  AGS+ELP TSNQTAEM SYSL H Q
Subjt:  LRTRDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLISNSTCPLCRCSVIPTTRCSDPPIIAPPPPPPPPLAGSAELPLTSNQTAEMGSYSLQHLQ

Query:  L-QQREGSSQSIC
        L QQ+EGSSQSIC
Subjt:  L-QQREGSSQSIC

XP_022928899.1 probable E3 ubiquitin-protein ligase RHA4A [Cucurbita moschata]1.2e-9890.28Show/hide
Query:  MGLPQTPSPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSS---PPILPTTSNTLTLYVTTACQVDLKADNPIDKLPKIQF
        MG PQTP+PPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSS   PPILPTTSNTLTLYVTTACQVDLKADNP+DKLPKI F
Subjt:  MGLPQTPSPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSS---PPILPTTSNTLTLYVTTACQVDLKADNPIDKLPKIQF

Query:  NEELRTRDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLISNSTCPLCRCSVIPTTRCSDPPIIAPPPPPPPPLAGSAELPLTSNQTAEMGSYSLQ
        NEELRTRDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWL SNSTCPLCRCSVIPTTRC DPP++  PPPPPP  AGS+ELPLTSNQTAEM SYSL 
Subjt:  NEELRTRDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLISNSTCPLCRCSVIPTTRCSDPPIIAPPPPPPPPLAGSAELPLTSNQTAEMGSYSLQ

Query:  HLQL-QQREGSSQSIC
        H QL QQ+EGSSQSIC
Subjt:  HLQL-QQREGSSQSIC

XP_022958025.1 probable E3 ubiquitin-protein ligase RHA4A [Cucurbita moschata]1.5e-9688.13Show/hide
Query:  MGLPQTP-SPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSS-PPILPTTSNTLTLYVTTACQVDLKADNPIDKLPKIQFN
        MG+PQTP +PPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSS PPILPTTSN LTLYVTTAC+VDLKADNP+DKLPKI FN
Subjt:  MGLPQTP-SPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSS-PPILPTTSNTLTLYVTTACQVDLKADNPIDKLPKIQFN

Query:  EELRTRDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLISNSTCPLCRCSVIPTTRCSDPPI-----IAPPPPPPPPLAGSAELPLTSNQTAEMGS
        EELR+RDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMN WL SNSTCPLCRCSVIPTTRCSDPP+     + PPPPPPPPLA S ELPL SNQTAEM S
Subjt:  EELRTRDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLISNSTCPLCRCSVIPTTRCSDPPI-----IAPPPPPPPPLAGSAELPLTSNQTAEMGS

Query:  YSLQHLQLQQREGSSQSIC
        YSLQH QLQQ+ GSSQSIC
Subjt:  YSLQHLQLQQREGSSQSIC

XP_023534491.1 probable E3 ubiquitin-protein ligase RHA4A [Cucurbita pepo subsp. pepo]8.8e-9788.18Show/hide
Query:  MGLPQTP-SPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSS--PPILPTTSNTLTLYVTTACQVDLKADNPIDKLPKIQF
        MG+PQTP +PPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSS  PPILPTTSN LTLYVTTAC+VDLKADNPIDKLPKI F
Subjt:  MGLPQTP-SPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSS--PPILPTTSNTLTLYVTTACQVDLKADNPIDKLPKIQF

Query:  NEELRTRDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLISNSTCPLCRCSVIPTTRCSDPPI-----IAPPPPPPPPLAGSAELPLTSNQTAEMG
        NEELR+RDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMN WL SNSTCPLCRCSVIPTTRCSDPP+     + PPPPPPPPLA S ELPL SNQTAEM 
Subjt:  NEELRTRDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLISNSTCPLCRCSVIPTTRCSDPPI-----IAPPPPPPPPLAGSAELPLTSNQTAEMG

Query:  SYSLQHLQLQQREGSSQSIC
        SYSLQH QLQQ+ GSSQSIC
Subjt:  SYSLQHLQLQQREGSSQSIC

XP_038907033.1 probable E3 ubiquitin-protein ligase RHA4A [Benincasa hispida]1.5e-10192.99Show/hide
Query:  MGLPQTPSPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSSPPILPTTSNTLTLYVTTACQVDLKADNPIDKLPKIQFNEE
        MGLPQTPSPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSSPPILPTTSNTLTLYVTTACQVDLKADN I+KLPKIQF+EE
Subjt:  MGLPQTPSPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSSPPILPTTSNTLTLYVTTACQVDLKADNPIDKLPKIQFNEE

Query:  LRTRDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLISNSTCPLCRCSVIPTTRCSDPPIIAPPPPPPPPLAGSAELPLTSNQTAEMGSYSLQHLQ
        L+TRDSLCCVCLGEFEIKE+LLQVPSCKHVFHIDCMNHWLISNSTCPLCRCSVIPTTRCSDPP IA    PPPPLAGS+ELP TSNQTAEMGSYSLQHLQ
Subjt:  LRTRDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLISNSTCPLCRCSVIPTTRCSDPPIIAPPPPPPPPLAGSAELPLTSNQTAEMGSYSLQHLQ

Query:  L--QQREGSSQSIC
        L  QQ+EGSSQSIC
Subjt:  L--QQREGSSQSIC

TrEMBL top hitse value%identityAlignment
A0A6J1DWP0 probable E3 ubiquitin-protein ligase RHA4A2.2e-9386.79Show/hide
Query:  MGLPQTPSPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSSPPILPTTSNTLTLYVTTACQVDLKADNPIDKLPKIQFNEE
        MGLPQTP+PPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLS SSSSSPPILPT+SN LTLYVTTACQVD KADNPI+KLPKI FNEE
Subjt:  MGLPQTPSPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSSPPILPTTSNTLTLYVTTACQVDLKADNPIDKLPKIQFNEE

Query:  LRTRDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLISNSTCPLCRCSVIPTTRCSDPPIIAPPPPPPPPLAGSAELPLTSNQTAEMGSYSLQHLQ
        LR RDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWL +NSTCPLCRCSVIP  RC DPP+ AP P  P P    +ELPLTSNQTAEM SYSL+H Q
Subjt:  LRTRDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLISNSTCPLCRCSVIPTTRCSDPPIIAPPPPPPPPLAGSAELPLTSNQTAEMGSYSLQHLQ

Query:  LQQREGSSQSIC
        LQQ+EGSSQSIC
Subjt:  LQQREGSSQSIC

A0A6J1EM64 probable E3 ubiquitin-protein ligase RHA4A5.9e-9990.28Show/hide
Query:  MGLPQTPSPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSS---PPILPTTSNTLTLYVTTACQVDLKADNPIDKLPKIQF
        MG PQTP+PPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSS   PPILPTTSNTLTLYVTTACQVDLKADNP+DKLPKI F
Subjt:  MGLPQTPSPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSS---PPILPTTSNTLTLYVTTACQVDLKADNPIDKLPKIQF

Query:  NEELRTRDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLISNSTCPLCRCSVIPTTRCSDPPIIAPPPPPPPPLAGSAELPLTSNQTAEMGSYSLQ
        NEELRTRDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWL SNSTCPLCRCSVIPTTRC DPP++  PPPPPP  AGS+ELPLTSNQTAEM SYSL 
Subjt:  NEELRTRDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLISNSTCPLCRCSVIPTTRCSDPPIIAPPPPPPPPLAGSAELPLTSNQTAEMGSYSLQ

Query:  HLQL-QQREGSSQSIC
        H QL QQ+EGSSQSIC
Subjt:  HLQL-QQREGSSQSIC

A0A6J1H2A4 probable E3 ubiquitin-protein ligase RHA4A7.2e-9788.13Show/hide
Query:  MGLPQTP-SPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSS-PPILPTTSNTLTLYVTTACQVDLKADNPIDKLPKIQFN
        MG+PQTP +PPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSS PPILPTTSN LTLYVTTAC+VDLKADNP+DKLPKI FN
Subjt:  MGLPQTP-SPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSS-PPILPTTSNTLTLYVTTACQVDLKADNPIDKLPKIQFN

Query:  EELRTRDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLISNSTCPLCRCSVIPTTRCSDPPI-----IAPPPPPPPPLAGSAELPLTSNQTAEMGS
        EELR+RDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMN WL SNSTCPLCRCSVIPTTRCSDPP+     + PPPPPPPPLA S ELPL SNQTAEM S
Subjt:  EELRTRDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLISNSTCPLCRCSVIPTTRCSDPPI-----IAPPPPPPPPLAGSAELPLTSNQTAEMGS

Query:  YSLQHLQLQQREGSSQSIC
        YSLQH QLQQ+ GSSQSIC
Subjt:  YSLQHLQLQQREGSSQSIC

A0A6J1I2V6 probable E3 ubiquitin-protein ligase RHA4A1.2e-9487.96Show/hide
Query:  MGLPQTPSPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSS---PPILPTTSNTLTLYVTTACQVDLKADNPIDKLPKIQF
        MG PQTP+PPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSS   PPILPTTSNTLTLYVTTACQVDLKADNP+DKLPKI F
Subjt:  MGLPQTPSPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSS---PPILPTTSNTLTLYVTTACQVDLKADNPIDKLPKIQF

Query:  NEELRTRDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLISNSTCPLCRCSVIPTTRCSDPPIIAPPPPPPPPLAGSAELPLTSNQTAEMGSYSLQ
        NEELRTRDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWL SNSTCPLCRCSVIPTTRC D P++  PPPPP   AGS+E P TS+QTAEM SYSL 
Subjt:  NEELRTRDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLISNSTCPLCRCSVIPTTRCSDPPIIAPPPPPPPPLAGSAELPLTSNQTAEMGSYSLQ

Query:  HLQL-QQREGSSQSIC
        H QL QQ+EGSSQSIC
Subjt:  HLQL-QQREGSSQSIC

A0A6J1K5R3 probable E3 ubiquitin-protein ligase RHA4A8.0e-9688.07Show/hide
Query:  MGLPQT-PSPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSS--PPILPTTSNTLTLYVTTACQVDLKADNPIDKLPKIQF
        MG+PQT  +PPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSS  PPILPTTSN LTLYVTTAC+VDLKA+NPIDKLPKI F
Subjt:  MGLPQT-PSPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSS--PPILPTTSNTLTLYVTTACQVDLKADNPIDKLPKIQF

Query:  NEELRTRDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLISNSTCPLCRCSVIPTTRCSDPPIIAPP---PPPPPPLAGSAELPLTSNQTAEMGSY
        NEELR+RDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMN WL SNSTCPLCRCSVIPTTRCSDPP++ PP   PPPPPPLA S ELPL SNQTAEM SY
Subjt:  NEELRTRDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLISNSTCPLCRCSVIPTTRCSDPPIIAPP---PPPPPPLAGSAELPLTSNQTAEMGSY

Query:  SLQHLQLQQREGSSQSIC
        SLQH QLQQ+ GSSQSIC
Subjt:  SLQHLQLQQREGSSQSIC

SwissProt top hitse value%identityAlignment
Q570X5 RING-H2 finger protein ATL583.5e-2441.61Show/hide
Query:  QLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSSPPILPTTSNTLTLYVTTACQVDLKADNPIDKLPKIQFNEELRTRDSLCCVCLGEFEI
        +LKLYQAFIFS+PI F+ I+  LFYL YL+R +S LSS    +  I   + +T+ L ++   +         + LP + F E     DS C VCLG+++ 
Subjt:  QLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSSPPILPTTSNTLTLYVTTACQVDLKADNPIDKLPKIQFNEELRTRDSLCCVCLGEFEI

Query:  KEELLQVPSCKHVFHIDCMNHWLISNSTCPLCRCSVIP--TTRCSDPPI
         ++L Q+P CKH FH+DC++ WL S++TCPLCR ++IP  + +  D P+
Subjt:  KEELLQVPSCKHVFHIDCMNHWLISNSTCPLCRCSVIP--TTRCSDPPI

Q84TF5 Probable E3 ubiquitin-protein ligase RHA4A1.9e-4662.86Show/hide
Query:  PQTPSPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSSPPILPTTSNTLT-LYVTTACQVDLKADNPIDKLPKIQFNEELR
        PQ+P  PHLYPQA+QLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSL   SS SP ILP +S+  T  ++ + C +D+K +   DKL  + FNEEL 
Subjt:  PQTPSPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSSPPILPTTSNTLT-LYVTTACQVDLKADNPIDKLPKIQFNEELR

Query:  TRDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLISNSTCPLCRCSV-IPTTRCS-DPPIIAPPPPPPPPL
        TRDSLCCVCLGEFE+KEEL+++P CKH+FH+DC++ WL S++TCPLCR SV I +T+ S D     P  P   P+
Subjt:  TRDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLISNSTCPLCRCSV-IPTTRCS-DPPIIAPPPPPPPPL

Q8GW38 RING-H2 finger protein ATL475.3e-1237.31Show/hide
Query:  IFSIPILFSIILFL-----LFYLFYLKRRASSLSSS---SSSSPPILPTTSNTLTLYVTTACQVDLKADNPIDKLPKIQFNEELRTRDSL-CCVCLGEFE
        I  I +L S+I F+     L   +YLK++ S+LSSS   S+ +P    + +    L               ID LP   + E   T++   C VCL EF 
Subjt:  IFSIPILFSIILFL-----LFYLFYLKRRASSLSSS---SSSSPPILPTTSNTLTLYVTTACQVDLKADNPIDKLPKIQFNEELRTRDSL-CCVCLGEFE

Query:  IKEELLQVPSCKHVFHIDCMNHWLISNSTCPLCR
          ++L  +P+C H FHIDC++ WL+SNSTCPLCR
Subjt:  IKEELLQVPSCKHVFHIDCMNHWLISNSTCPLCR

Q9SN27 E3 ubiquitin-protein ligase ATL592.3e-1537.4Show/hide
Query:  FIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSSPPILPTTSNTLTLYVTTACQVDLKADNPIDKLPKIQFNEELRTRDSLCCVCLGEFEIKEELLQV
        FI  +PI   +I+ L+ Y+    RR S+ +   SS    +PT +N  T       ++ L  D   + LP + + E     D+ C VCLG+++ +E+L Q+
Subjt:  FIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSSPPILPTTSNTLTLYVTTACQVDLKADNPIDKLPKIQFNEELRTRDSLCCVCLGEFEIKEELLQV

Query:  PSCKHVFHIDCMNHWLISNSTCPLCRCSVIP
        PSC H FH++C++ WL S++TCPLCR S+IP
Subjt:  PSCKHVFHIDCMNHWLISNSTCPLCRCSVIP

Q9SN28 RING-H2 finger protein ATL72.5e-2239.1Show/hide
Query:  LPQTPSPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASS---LSSSSSSSPPILPTTSNTLTLYVTTACQVDLKADNPIDKLPKIQFNE
        +P+T +P +   ++ +LKLYQAFIFS+PI F+ I+  + Y+ YL+R +++    SS        +PT +N  T       ++ L  D   + LP + + E
Subjt:  LPQTPSPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASS---LSSSSSSSPPILPTTSNTLTLYVTTACQVDLKADNPIDKLPKIQFNE

Query:  ELRTRDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLISNSTCPLCRCSVIP
            +DS C VCLG+++ +E+L Q+PSC H FH++C++ WL S++TCPLCR S+IP
Subjt:  ELRTRDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLISNSTCPLCRCSVIP

Arabidopsis top hitse value%identityAlignment
AT1G23980.1 RING/U-box superfamily protein3.8e-1337.31Show/hide
Query:  IFSIPILFSIILFL-----LFYLFYLKRRASSLSSS---SSSSPPILPTTSNTLTLYVTTACQVDLKADNPIDKLPKIQFNEELRTRDSL-CCVCLGEFE
        I  I +L S+I F+     L   +YLK++ S+LSSS   S+ +P    + +    L               ID LP   + E   T++   C VCL EF 
Subjt:  IFSIPILFSIILFL-----LFYLFYLKRRASSLSSS---SSSSPPILPTTSNTLTLYVTTACQVDLKADNPIDKLPKIQFNEELRTRDSL-CCVCLGEFE

Query:  IKEELLQVPSCKHVFHIDCMNHWLISNSTCPLCR
          ++L  +P+C H FHIDC++ WL+SNSTCPLCR
Subjt:  IKEELLQVPSCKHVFHIDCMNHWLISNSTCPLCR

AT1G33480.1 RING/U-box superfamily protein2.5e-2541.61Show/hide
Query:  QLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSSPPILPTTSNTLTLYVTTACQVDLKADNPIDKLPKIQFNEELRTRDSLCCVCLGEFEI
        +LKLYQAFIFS+PI F+ I+  LFYL YL+R +S LSS    +  I   + +T+ L ++   +         + LP + F E     DS C VCLG+++ 
Subjt:  QLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSSPPILPTTSNTLTLYVTTACQVDLKADNPIDKLPKIQFNEELRTRDSLCCVCLGEFEI

Query:  KEELLQVPSCKHVFHIDCMNHWLISNSTCPLCRCSVIP--TTRCSDPPI
         ++L Q+P CKH FH+DC++ WL S++TCPLCR ++IP  + +  D P+
Subjt:  KEELLQVPSCKHVFHIDCMNHWLISNSTCPLCRCSVIP--TTRCSDPPI

AT4G10150.1 RING/U-box superfamily protein1.8e-2339.1Show/hide
Query:  LPQTPSPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASS---LSSSSSSSPPILPTTSNTLTLYVTTACQVDLKADNPIDKLPKIQFNE
        +P+T +P +   ++ +LKLYQAFIFS+PI F+ I+  + Y+ YL+R +++    SS        +PT +N  T       ++ L  D   + LP + + E
Subjt:  LPQTPSPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASS---LSSSSSSSPPILPTTSNTLTLYVTTACQVDLKADNPIDKLPKIQFNE

Query:  ELRTRDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLISNSTCPLCRCSVIP
            +DS C VCLG+++ +E+L Q+PSC H FH++C++ WL S++TCPLCR S+IP
Subjt:  ELRTRDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLISNSTCPLCRCSVIP

AT4G10160.1 RING/U-box superfamily protein1.6e-1637.4Show/hide
Query:  FIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSSPPILPTTSNTLTLYVTTACQVDLKADNPIDKLPKIQFNEELRTRDSLCCVCLGEFEIKEELLQV
        FI  +PI   +I+ L+ Y+    RR S+ +   SS    +PT +N  T       ++ L  D   + LP + + E     D+ C VCLG+++ +E+L Q+
Subjt:  FIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSSPPILPTTSNTLTLYVTTACQVDLKADNPIDKLPKIQFNEELRTRDSLCCVCLGEFEIKEELLQV

Query:  PSCKHVFHIDCMNHWLISNSTCPLCRCSVIP
        PSC H FH++C++ WL S++TCPLCR S+IP
Subjt:  PSCKHVFHIDCMNHWLISNSTCPLCRCSVIP

AT4G24015.1 RING/U-box superfamily protein1.4e-4762.86Show/hide
Query:  PQTPSPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSSPPILPTTSNTLT-LYVTTACQVDLKADNPIDKLPKIQFNEELR
        PQ+P  PHLYPQA+QLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSL   SS SP ILP +S+  T  ++ + C +D+K +   DKL  + FNEEL 
Subjt:  PQTPSPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSSPPILPTTSNTLT-LYVTTACQVDLKADNPIDKLPKIQFNEELR

Query:  TRDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLISNSTCPLCRCSV-IPTTRCS-DPPIIAPPPPPPPPL
        TRDSLCCVCLGEFE+KEEL+++P CKH+FH+DC++ WL S++TCPLCR SV I +T+ S D     P  P   P+
Subjt:  TRDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLISNSTCPLCRCSV-IPTTRCS-DPPIIAPPPPPPPPL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTGCCTCAAACTCCATCCCCTCCTCATCTTTACCCTCAAGCACTTCAACTTAAGCTTTATCAAGCCTTCATATTCTCCATTCCAATCCTCTTCTCCATTATTCT
CTTCCTTCTTTTCTACTTGTTTTATCTCAAAAGAAGAGCTTCCTCTCTCTCTTCTTCTTCTTCTTCATCTCCCCCAATACTTCCAACTACTTCCAATACACTCACTCTCT
ATGTTACAACTGCTTGTCAAGTGGATTTGAAGGCAGATAATCCCATAGACAAACTTCCCAAGATCCAATTCAATGAAGAACTAAGGACTAGAGATTCTCTGTGCTGCGTC
TGCCTGGGAGAATTCGAGATAAAAGAGGAATTGTTGCAAGTCCCATCATGCAAACATGTGTTTCATATTGACTGTATGAACCATTGGCTCATCTCCAACTCAACTTGTCC
TCTCTGTAGATGCTCAGTCATCCCAACAACCCGATGTTCTGATCCGCCCATCATTGCACCACCCCCACCCCCGCCACCGCCACTAGCTGGCTCAGCAGAGCTTCCCCTGA
CTTCCAACCAGACTGCAGAGATGGGATCCTATTCACTCCAACATCTGCAGCTGCAACAACGGGAAGGATCAAGTCAAAGTATATGCTAA
mRNA sequenceShow/hide mRNA sequence
CCCCTCTCCTTTTCTGACCTTAAATTGAAACAACTTCCTCTCTATAAGCAAAGCAAGAAGCTTTCTTTCTTTCTTTCTTTTCTTTCTTAGCTCAAATTTAGCTTGAGTTT
GGTTTTAACCTTATAAAAGAAATTGAAAATTAAAATTTTTTTTTGATGGGTTTGCCTCAAACTCCATCCCCTCCTCATCTTTACCCTCAAGCACTTCAACTTAAGCTTTA
TCAAGCCTTCATATTCTCCATTCCAATCCTCTTCTCCATTATTCTCTTCCTTCTTTTCTACTTGTTTTATCTCAAAAGAAGAGCTTCCTCTCTCTCTTCTTCTTCTTCTT
CATCTCCCCCAATACTTCCAACTACTTCCAATACACTCACTCTCTATGTTACAACTGCTTGTCAAGTGGATTTGAAGGCAGATAATCCCATAGACAAACTTCCCAAGATC
CAATTCAATGAAGAACTAAGGACTAGAGATTCTCTGTGCTGCGTCTGCCTGGGAGAATTCGAGATAAAAGAGGAATTGTTGCAAGTCCCATCATGCAAACATGTGTTTCA
TATTGACTGTATGAACCATTGGCTCATCTCCAACTCAACTTGTCCTCTCTGTAGATGCTCAGTCATCCCAACAACCCGATGTTCTGATCCGCCCATCATTGCACCACCCC
CACCCCCGCCACCGCCACTAGCTGGCTCAGCAGAGCTTCCCCTGACTTCCAACCAGACTGCAGAGATGGGATCCTATTCACTCCAACATCTGCAGCTGCAACAACGGGAA
GGATCAAGTCAAAGTATATGCTAAATGCAATAATCCAACCATGCAATGGAATCACAGGTTTAAATGGACAAATAACTCAAGAGTTTCTCCCATTGAGGGAGGAAAAGTTG
TCTTCCATATTCATATACAAACATATACATATAAATATGTGTATATATATATCAACAAGCTTTTTGCAACCTCCCATTGTTCTTGACAGCTAGCCAGGCATCGTGATCTT
CAGATAGCTGCAATAGTCCTGTTAAAGATCAAAATTGTAAAGAGGCCACTCGAAAATCATCAAGTCGAATACTTTCTGGGCTCCCTTCCTTTCATTGCATTAACCACTGA
ATATGGAATGCTAAATGTAAGGAAATAAAAAGATTCTATTTGTGTGTGCAAATGGTGTAAACATCTCCTGCGAGTAAGTTATGAACAAAAGTTAAACTGAATGGAAGAAG
ATTTGCATTTGAATGCGTTCAAATTCTTGAAACTTGTGCATCAAATGATGCTTCCAGTCTTCTGCCTAGTTGAATAAATAACCGAACAGAAAAGACATATTTACATTGAT
CAGGAAAGAAGGCTCACACAAACTCA
Protein sequenceShow/hide protein sequence
MGLPQTPSPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSSPPILPTTSNTLTLYVTTACQVDLKADNPIDKLPKIQFNEELRTRDSLCCV
CLGEFEIKEELLQVPSCKHVFHIDCMNHWLISNSTCPLCRCSVIPTTRCSDPPIIAPPPPPPPPLAGSAELPLTSNQTAEMGSYSLQHLQLQQREGSSQSIC