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Clc01G02010 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G02010
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionTrehalase 1
Genome locationClcChr01:1795101..1797866
RNA-Seq ExpressionClc01G02010
SyntenyClc01G02010
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647837.1 hypothetical protein Csa_000196 [Cucumis sativus]2.4e-2988.61Show/hide
Query:  MENTDNNALSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDEDDDDDQLLLSNQPLSDQIILPDQQDGF
        MENTDNNALSILSREKLDQVAAWVAATMSSAFFSSLERFSCV++ATN+LDD+DDDDD LLLS QPLSDQI+LPDQ DG+
Subjt:  MENTDNNALSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDEDDDDDQLLLSNQPLSDQIILPDQQDGF

KAG6605572.1 hypothetical protein SDJN03_02889, partial [Cucurbita argyrosperma subsp. sororia]5.0e-2783.33Show/hide
Query:  MENTDNNALSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDEDDDDDQLLLSNQPLSDQIILPDQQDGFVDLPV
        MENT+NN LSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATND DD+DDDD+Q L S+Q  SDQ    DQQDGFVDLPV
Subjt:  MENTDNNALSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDEDDDDDQLLLSNQPLSDQIILPDQQDGFVDLPV

ONI07532.1 hypothetical protein PRUPE_5G126200 [Prunus persica]1.7e-1173.21Show/hide
Query:  MENTDNNALSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDEDDDD
        MEN +N   SI+SREKLDQVA+WV+AT+S+AFFSSLERFSCVN+AT D DDED+D+
Subjt:  MENTDNNALSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDEDDDD

TQE06076.1 hypothetical protein C1H46_008272 [Malus baccata]3.9e-1157.89Show/hide
Query:  NALSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDEDDDDDQ-----LLL----SNQPLSDQIILP
        N  SI+SREKLDQVA+W++AT+ +AFFSSLERFSCVN++T DLDDED+D+D+     L L    +N+P +D   LP
Subjt:  NALSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDEDDDDDQ-----LLL----SNQPLSDQIILP

XP_008437391.1 PREDICTED: uncharacterized protein LOC103482822 [Cucumis melo]2.0e-3191.67Show/hide
Query:  MENTDNNALSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDEDDDDDQLLLSNQPLSDQIILPDQQDGFVDLPV
        MENTDNNALSILSREKLDQVAAWVAATMSSAFFSSLERFSCVN+ATNDLDD+DDDDD LLLS QPLSDQI+ PDQ DGFVDLPV
Subjt:  MENTDNNALSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDEDDDDDQLLLSNQPLSDQIILPDQQDGFVDLPV

TrEMBL top hitse value%identityAlignment
A0A0A0KK32 Uncharacterized protein6.6e-3390.48Show/hide
Query:  MENTDNNALSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDEDDDDDQLLLSNQPLSDQIILPDQQDGFVDLPV
        MENTDNNALSILSREKLDQVAAWVAATMSSAFFSSLERFSCV++ATN+LDD+DDDDD LLLS QPLSDQI+LPDQ DGFVDLPV
Subjt:  MENTDNNALSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDEDDDDDQLLLSNQPLSDQIILPDQQDGFVDLPV

A0A1S3AUH1 uncharacterized protein LOC1034828229.5e-3291.67Show/hide
Query:  MENTDNNALSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDEDDDDDQLLLSNQPLSDQIILPDQQDGFVDLPV
        MENTDNNALSILSREKLDQVAAWVAATMSSAFFSSLERFSCVN+ATNDLDD+DDDDD LLLS QPLSDQI+ PDQ DGFVDLPV
Subjt:  MENTDNNALSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDEDDDDDQLLLSNQPLSDQIILPDQQDGFVDLPV

A0A5A7THD9 Trehalase 19.5e-3291.67Show/hide
Query:  MENTDNNALSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDEDDDDDQLLLSNQPLSDQIILPDQQDGFVDLPV
        MENTDNNALSILSREKLDQVAAWVAATMSSAFFSSLERFSCVN+ATNDLDD+DDDDD LLLS QPLSDQI+ PDQ DGFVDLPV
Subjt:  MENTDNNALSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDEDDDDDQLLLSNQPLSDQIILPDQQDGFVDLPV

A0A6J5UUI8 Uncharacterized protein8.4e-1273.21Show/hide
Query:  MENTDNNALSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDEDDDD
        MEN +N   SI+SREKLDQVA+WV+AT+S+AFFSSLERFSCVN+AT D DDED+D+
Subjt:  MENTDNNALSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDEDDDD

M5WNZ8 Uncharacterized protein8.4e-1273.21Show/hide
Query:  MENTDNNALSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDEDDDD
        MEN +N   SI+SREKLDQVA+WV+AT+S+AFFSSLERFSCVN+AT D DDED+D+
Subjt:  MENTDNNALSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDEDDDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G10810.1 unknown protein1.3e-0953.85Show/hide
Query:  LSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDEDDDDDQ--LLLSNQPLSDQII
        LS  S EKLDQ A+WV+ T+ SAFF+SLER SCVN++T+D DDE ++     L LS  P  D I+
Subjt:  LSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDEDDDDDQ--LLLSNQPLSDQII

AT4G24026.1 unknown protein2.9e-0947.46Show/hide
Query:  DRMENTDNNALSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDEDDDDD
        D+  +  +N  +  S EK+D  A+W++AT+ SAFF+SLER +CVN++T+  DD+DDDD+
Subjt:  DRMENTDNNALSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDEDDDDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCTTCTAACCCTTCTGAGATAAATTTGAACACTAGGGACGTTTCAGCTAAGCTTGAGATTGAACCCTCGATTTCATCTCCCAATTCCTCTCGCAAATCACTTCC
ACCAACAGCATATTTCGAATTCGATTCTTCAATCGGCAACCGGAATCTCGTCGGAAATCTTTGCTCAGATCGGATGGAAAACACCGACAATAACGCCCTCAGTATCCTTT
CACGGGAGAAGCTGGACCAGGTTGCGGCCTGGGTCGCGGCCACCATGTCTTCCGCCTTTTTCTCCTCCTTAGAACGATTCTCCTGTGTCAACATTGCCACCAATGATCTT
GACGACGAAGACGACGACGACGACCAGCTTCTCTTGTCCAATCAGCCGCTTTCCGATCAAATTATACTCCCTGACCAACAAGACGGGTTTGTCGATCTTCCTGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATCTTCTAACCCTTCTGAGATAAATTTGAACACTAGGGACGTTTCAGCTAAGCTTGAGATTGAACCCTCGATTTCATCTCCCAATTCCTCTCGCAAATCACTTCC
ACCAACAGCATATTTCGAATTCGATTCTTCAATCGGCAACCGGAATCTCGTCGGAAATCTTTGCTCAGATCGGATGGAAAACACCGACAATAACGCCCTCAGTATCCTTT
CACGGGAGAAGCTGGACCAGGTTGCGGCCTGGGTCGCGGCCACCATGTCTTCCGCCTTTTTCTCCTCCTTAGAACGATTCTCCTGTGTCAACATTGCCACCAATGATCTT
GACGACGAAGACGACGACGACGACCAGCTTCTCTTGTCCAATCAGCCGCTTTCCGATCAAATTATACTCCCTGACCAACAAGACGGGTTTGTCGATCTTCCTGTGTGA
Protein sequenceShow/hide protein sequence
MESSNPSEINLNTRDVSAKLEIEPSISSPNSSRKSLPPTAYFEFDSSIGNRNLVGNLCSDRMENTDNNALSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDL
DDEDDDDDQLLLSNQPLSDQIILPDQQDGFVDLPV