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Clc01G02170 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G02170
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionNucleotide-sugar transporter
Genome locationClcChr01:1901238..1901918
RNA-Seq ExpressionClc01G02170
SyntenyClc01G02170
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042696.1 hypothetical protein E6C27_scaffold44G001940 [Cucumis melo var. makuwa]2.9e-3891.36Show/hide
Query:  SCVDAARCSVIGSEHQQRSNKTLDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVTGDVAQKRKFAMGAFLWPCEMY
        SC DAARCS+IGSEHQQRS+K LDQFQMPLHYPRYKRSDYE MPEWKLDCLLKEYGLP+ GDVAQKRKFAMGAFLWPCEMY
Subjt:  SCVDAARCSVIGSEHQQRSNKTLDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVTGDVAQKRKFAMGAFLWPCEMY

KAE8647840.1 hypothetical protein Csa_000107 [Cucumis sativus]4.1e-3790Show/hide
Query:  SCVDAARCSVIGSEHQQRSNKTLDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVTGDVAQKRKFAMGAFLWPCEM
        SC DAARCS+IGSEHQQRS+K  DQFQMPLHYPRY+RSDYEGMPEWKLDCLLKEYGLPV GDVAQKRKFAMGAFLWPCE+
Subjt:  SCVDAARCSVIGSEHQQRSNKTLDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVTGDVAQKRKFAMGAFLWPCEM

KAG6606051.1 hypothetical protein SDJN03_03368, partial [Cucurbita argyrosperma subsp. sororia]8.4e-3073.63Show/hide
Query:  MNGITSCVDAARCSVIGSEHQQRS-----NKTLDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVTGDVAQKRKFAMGAFLWPCEMY
        M+ I S V AARC+VIG+E  Q+      +K  D FQMPLHYP+YKRSDYEGM EWKLDCLLKEYGLPV GDVAQKRKFAMGAFLWP EMY
Subjt:  MNGITSCVDAARCSVIGSEHQQRS-----NKTLDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVTGDVAQKRKFAMGAFLWPCEMY

KAG7035999.1 hypothetical protein SDJN02_02799, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-2972.04Show/hide
Query:  MNGITSCVDAARCSVIGSEHQQRS-------NKTLDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVTGDVAQKRKFAMGAFLWPCEMY
        M+ I S V AARC+VIG+E  Q+        +K  D FQMPLHYP+YKRSDYEGM EWKLDCLLKEYGLPV GDVAQKRKFAMGAFLWP EMY
Subjt:  MNGITSCVDAARCSVIGSEHQQRS-------NKTLDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVTGDVAQKRKFAMGAFLWPCEMY

XP_022958391.1 uncharacterized protein LOC111459627 [Cucurbita moschata]9.9e-3173.91Show/hide
Query:  MNGITSCVDAARCSVIGSEHQQRS------NKTLDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVTGDVAQKRKFAMGAFLWPCEMY
        M+ I S VDAARC+VIG+E  Q+       +K  D FQMPLHYP+YKRSDYEGM EWKLDCLLKEYGLPV GDVAQKRKFAMGAFLWP EMY
Subjt:  MNGITSCVDAARCSVIGSEHQQRS------NKTLDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVTGDVAQKRKFAMGAFLWPCEMY

TrEMBL top hitse value%identityAlignment
A0A0A0KMG0 Uncharacterized protein1.9e-4089.53Show/hide
Query:  MNGITSCVDAARCSVIGSEHQQRSNKTLDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVTGDVAQKRKFAMGAFLWPCEMY
        M+GI SC DAARCS+IGSEHQQRS+K  DQFQMPLHYPRY+RSDYEGMPEWKLDCLLKEYGLPV GDVAQKRKFAMGAFLWPCEMY
Subjt:  MNGITSCVDAARCSVIGSEHQQRSNKTLDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVTGDVAQKRKFAMGAFLWPCEMY

A0A5D3C447 Uncharacterized protein1.4e-3891.36Show/hide
Query:  SCVDAARCSVIGSEHQQRSNKTLDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVTGDVAQKRKFAMGAFLWPCEMY
        SC DAARCS+IGSEHQQRS+K LDQFQMPLHYPRYKRSDYE MPEWKLDCLLKEYGLP+ GDVAQKRKFAMGAFLWPCEMY
Subjt:  SCVDAARCSVIGSEHQQRSNKTLDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVTGDVAQKRKFAMGAFLWPCEMY

A0A6J1CXF4 uncharacterized protein LOC1110153214.2e-2780.88Show/hide
Query:  EHQQRSNKTLDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVTGDVAQKRKFAMGAFLWPCEMY
        + QQR +K   QFQMPLHYPRYK+SDYE MPEWKLDCLLKEYGLP+ GDVAQKRKFAMGAFLWPC+ Y
Subjt:  EHQQRSNKTLDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVTGDVAQKRKFAMGAFLWPCEMY

A0A6J1H1Y5 uncharacterized protein LOC1114596274.8e-3173.91Show/hide
Query:  MNGITSCVDAARCSVIGSEHQQRS------NKTLDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVTGDVAQKRKFAMGAFLWPCEMY
        M+ I S VDAARC+VIG+E  Q+       +K  D FQMPLHYP+YKRSDYEGM EWKLDCLLKEYGLPV GDVAQKRKFAMGAFLWP EMY
Subjt:  MNGITSCVDAARCSVIGSEHQQRS------NKTLDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVTGDVAQKRKFAMGAFLWPCEMY

A0A7J9C7B6 Uncharacterized protein1.6e-2367.11Show/hide
Query:  AARCSVIGSEHQQRSNKTLDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVTGDVAQKRKFAMGAFLWPCEM
        AAR    G+ HQ +SN     FQMPLHYPRYK+SDYE MPEW+LDCLL +YGLP+ GD  QKRKFAMGAFLWP ++
Subjt:  AARCSVIGSEHQQRSNKTLDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVTGDVAQKRKFAMGAFLWPCEM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09950.1 unknown protein7.6e-1357.41Show/hide
Query:  FQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVTGD--VAQKRKFAMGAFLWP
        F+MPLHYPRY + DYE M EW+LD LL EYGL    D  + +KR FA+  F+WP
Subjt:  FQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVTGD--VAQKRKFAMGAFLWP

AT3G11405.1 unknown protein2.7e-1055.77Show/hide
Query:  FQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPV-TGDVAQKRKFAMGAFLW
        FQMPL YP Y +  Y+ M E +LD LLK YGLP   G+++ K++FA+GAFLW
Subjt:  FQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPV-TGDVAQKRKFAMGAFLW

AT3G55570.1 unknown protein8.7e-1766.67Show/hide
Query:  FQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVTGDVAQKRKFAMGAFLW
        F+MPLHYPRY + DY+ MPEWKLD +L +YGL   GD+A KR FA+GAFLW
Subjt:  FQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVTGDVAQKRKFAMGAFLW

AT5G41761.1 unknown protein1.4e-1963.08Show/hide
Query:  HQQRSNKTLDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVTGDVAQKRKFAMGAFLWPCE
        H +  N++   FQ+PLHYP+Y +SDYE MPEW+LD LL+EYGLPV GD  +KRKFA+GAFLW  E
Subjt:  HQQRSNKTLDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVTGDVAQKRKFAMGAFLWPCE

AT5G55620.1 unknown protein4.4e-1352.73Show/hide
Query:  FQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVTGDVAQKRKFAMGAFLWPCEM
        FQ+PLHYP+Y +SDYE M + +LD LLK+YG    G +  KR FA+ +FLWP ++
Subjt:  FQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVTGDVAQKRKFAMGAFLWPCEM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGGAATAACGAGCTGTGTCGATGCTGCTCGGTGCTCCGTGATCGGGTCGGAGCATCAGCAGCGATCGAACAAAACATTGGATCAGTTTCAAATGCCTCTTCACTA
CCCAAGGTACAAGAGGAGTGACTATGAGGGCATGCCGGAGTGGAAATTGGACTGCCTACTTAAAGAATATGGTCTACCGGTCACCGGAGACGTCGCTCAGAAGCGAAAGT
TCGCCATGGGAGCTTTCCTTTGGCCTTGTGAAATGTACTGA
mRNA sequenceShow/hide mRNA sequence
TATAAATGCAGTCTAGCTCCCACCACCTACTATAAGCTCAATTAATTCATTATTTCTCTCCTTTCCCTAATCCCTCCTCATGAGTTCCCTATAAAAGGCCAACCTTTTCA
CCACCATTTGCATTTGCAAGAAAGGTGAAAAAGACCCGAAAGCTGGAGAAGATGAATGGAATAACGAGCTGTGTCGATGCTGCTCGGTGCTCCGTGATCGGGTCGGAGCA
TCAGCAGCGATCGAACAAAACATTGGATCAGTTTCAAATGCCTCTTCACTACCCAAGGTACAAGAGGAGTGACTATGAGGGCATGCCGGAGTGGAAATTGGACTGCCTAC
TTAAAGAATATGGTCTACCGGTCACCGGAGACGTCGCTCAGAAGCGAAAGTTCGCCATGGGAGCTTTCCTTTGGCCTTGTGAAATGTACTGAATTAGATCATTATGTCAA
AAACTTTAAACACAAAGCTATTTATAAGTTTAGTTACTCTTAGCTAATTATAACGTGTGTATGTGTTTTTGTGTGTGTGTTAATATGAAAAGTTAAGAATTTCTTTTAAG
AGGGTTGTCTTTTTCTTGCAACTTTTAGATGTTTTAATTAAGTTTGTGTTATTATACTTGATAATGTTCTAATCTTATTTTGTTTTTCATTACTCATTTTGTCACTTTTT
TAAATTTCAATTATTATAATT
Protein sequenceShow/hide protein sequence
MNGITSCVDAARCSVIGSEHQQRSNKTLDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVTGDVAQKRKFAMGAFLWPCEMY