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Clc01G02465 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G02465
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionG-patch domain-containing protein
Genome locationClcChr01:2174295..2181357
RNA-Seq ExpressionClc01G02465
SyntenyClc01G02465
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RXH77074.1 hypothetical protein DVH24_019962 [Malus domestica]2.2e-2745.51Show/hide
Query:  DKSITGVQELGIKSRPKKIPGCYFQGRKTSFDESDDEDSGDTA----------------------------------------LKQLKALIDERATSVFA
        DKS TG Q LGIK R KK+ GCYF+G+KTSF++SDDEDS D                                          LK LKALIDE ++SVF+
Subjt:  DKSITGVQELGIKSRPKKIPGCYFQGRKTSFDESDDEDSGDTA----------------------------------------LKQLKALIDERATSVFA

Query:  NYSSKKDALAYLKQVPKMPKHQRYRI-----LHVTCNISEDIKLLAICRSRGLSGTRDSCGISCKSSPRTPNHLTLQA
        N+SSK+DALAYL+Q  K+   + + +       +TC IS++IKLLAI RS G +GT+   G S +SSPR+PNH TLQA
Subjt:  NYSSKKDALAYLKQVPKMPKHQRYRI-----LHVTCNISEDIKLLAICRSRGLSGTRDSCGISCKSSPRTPNHLTLQA

XP_004143884.1 uncharacterized protein LOC101213045 isoform X1 [Cucumis sativus]6.8e-2150.37Show/hide
Query:  ENIAYCNCKESRFHVEFLDKSITGVQELGIKSRPKKIPGCYFQGRKTSFDESDDEDSGDTA---------------------------------------
        E IA+    +   +    DKS TG Q LGIKSRPKKI GCYF+G+KTSFD+SDDEDSGD A                                       
Subjt:  ENIAYCNCKESRFHVEFLDKSITGVQELGIKSRPKKIPGCYFQGRKTSFDESDDEDSGDTA---------------------------------------

Query:  ----LKQLKALIDERATSVFANYSSKKDALAYLKQ
            LKQLKALIDER TSVFANYSSKKDALAYLKQ
Subjt:  ----LKQLKALIDERATSVFANYSSKKDALAYLKQ

XP_011654716.1 G patch domain-containing protein 4 isoform X2 [Cucumis sativus]6.8e-2150.37Show/hide
Query:  ENIAYCNCKESRFHVEFLDKSITGVQELGIKSRPKKIPGCYFQGRKTSFDESDDEDSGDTA---------------------------------------
        E IA+    +   +    DKS TG Q LGIKSRPKKI GCYF+G+KTSFD+SDDEDSGD A                                       
Subjt:  ENIAYCNCKESRFHVEFLDKSITGVQELGIKSRPKKIPGCYFQGRKTSFDESDDEDSGDTA---------------------------------------

Query:  ----LKQLKALIDERATSVFANYSSKKDALAYLKQ
            LKQLKALIDER TSVFANYSSKKDALAYLKQ
Subjt:  ----LKQLKALIDERATSVFANYSSKKDALAYLKQ

XP_022157163.1 uncharacterized protein LOC111023946 [Momordica charantia]2.3e-2147.33Show/hide
Query:  EGSREVFTNFKWVHMILENIAYCNCKESRFHVEFLDKSITGVQELGIKSRPKKIPGCYFQGRKTSFDESDDEDSGDTA----------------------
        E  R      K    + E IA+    +   +    DK+ TG Q LGIKSRPKKI GCYF+G+KTSFDESDDEDSGD A                      
Subjt:  EGSREVFTNFKWVHMILENIAYCNCKESRFHVEFLDKSITGVQELGIKSRPKKIPGCYFQGRKTSFDESDDEDSGDTA----------------------

Query:  -------------------LKQLKALIDERATSVFANYSSKKDALAYLKQ
                           LKQLKALIDERATSVF+NYSSKKDALAYLKQ
Subjt:  -------------------LKQLKALIDERATSVFANYSSKKDALAYLKQ

XP_038906531.1 uncharacterized protein LOC120092507 [Benincasa hispida]2.3e-2158.12Show/hide
Query:  DKSITGVQELGIKSRPKKIPGCYFQGRKTSFDESDDEDSGDTA-------------------------------------------LKQLKALIDERATS
        DKS TG Q LGIKSRPKKI GCYFQG+KTSFDESDDEDSGD A                                           LKQLKALIDERATS
Subjt:  DKSITGVQELGIKSRPKKIPGCYFQGRKTSFDESDDEDSGDTA-------------------------------------------LKQLKALIDERATS

Query:  VFANYSSKKDALAYLKQ
        VFANYSSKKDALAYLKQ
Subjt:  VFANYSSKKDALAYLKQ

TrEMBL top hitse value%identityAlignment
A0A0A0KQU0 G-patch domain-containing protein3.3e-2150.37Show/hide
Query:  ENIAYCNCKESRFHVEFLDKSITGVQELGIKSRPKKIPGCYFQGRKTSFDESDDEDSGDTA---------------------------------------
        E IA+    +   +    DKS TG Q LGIKSRPKKI GCYF+G+KTSFD+SDDEDSGD A                                       
Subjt:  ENIAYCNCKESRFHVEFLDKSITGVQELGIKSRPKKIPGCYFQGRKTSFDESDDEDSGDTA---------------------------------------

Query:  ----LKQLKALIDERATSVFANYSSKKDALAYLKQ
            LKQLKALIDER TSVFANYSSKKDALAYLKQ
Subjt:  ----LKQLKALIDERATSVFANYSSKKDALAYLKQ

A0A498I4F3 G-patch domain-containing protein1.1e-2745.51Show/hide
Query:  DKSITGVQELGIKSRPKKIPGCYFQGRKTSFDESDDEDSGDTA----------------------------------------LKQLKALIDERATSVFA
        DKS TG Q LGIK R KK+ GCYF+G+KTSF++SDDEDS D                                          LK LKALIDE ++SVF+
Subjt:  DKSITGVQELGIKSRPKKIPGCYFQGRKTSFDESDDEDSGDTA----------------------------------------LKQLKALIDERATSVFA

Query:  NYSSKKDALAYLKQVPKMPKHQRYRI-----LHVTCNISEDIKLLAICRSRGLSGTRDSCGISCKSSPRTPNHLTLQA
        N+SSK+DALAYL+Q  K+   + + +       +TC IS++IKLLAI RS G +GT+   G S +SSPR+PNH TLQA
Subjt:  NYSSKKDALAYLKQVPKMPKHQRYRI-----LHVTCNISEDIKLLAICRSRGLSGTRDSCGISCKSSPRTPNHLTLQA

A0A5A7TH90 G patch domain-containing protein 4 isoform X21.4e-1947.41Show/hide
Query:  ENIAYCNCKESRFHVEFLDKSITGVQELGIKSRPKKIPGCYFQGRKTSFDESDDEDSGDTA---------------------------------------
        E IA+    +   +    DKS TG Q LGIKSRPKK+ GCYF+G+KTSFD+SDDE++ D A                                       
Subjt:  ENIAYCNCKESRFHVEFLDKSITGVQELGIKSRPKKIPGCYFQGRKTSFDESDDEDSGDTA---------------------------------------

Query:  ----LKQLKALIDERATSVFANYSSKKDALAYLKQ
            LKQLKALIDER TSVFANYSSKKDALAYLKQ
Subjt:  ----LKQLKALIDERATSVFANYSSKKDALAYLKQ

A0A6J1DSN5 uncharacterized protein LOC1110239461.1e-2147.33Show/hide
Query:  EGSREVFTNFKWVHMILENIAYCNCKESRFHVEFLDKSITGVQELGIKSRPKKIPGCYFQGRKTSFDESDDEDSGDTA----------------------
        E  R      K    + E IA+    +   +    DK+ TG Q LGIKSRPKKI GCYF+G+KTSFDESDDEDSGD A                      
Subjt:  EGSREVFTNFKWVHMILENIAYCNCKESRFHVEFLDKSITGVQELGIKSRPKKIPGCYFQGRKTSFDESDDEDSGDTA----------------------

Query:  -------------------LKQLKALIDERATSVFANYSSKKDALAYLKQ
                           LKQLKALIDERATSVF+NYSSKKDALAYLKQ
Subjt:  -------------------LKQLKALIDERATSVFANYSSKKDALAYLKQ

A0A6J1K6Y7 PIN2/TERF1-interacting telomerase inhibitor 11.4e-1955.17Show/hide
Query:  DKSITGVQELGIKSRPKKIPGCYFQGRKTSFDESDDEDSGDTA------------------------------------------LKQLKALIDERATSV
        DKS TG Q LGIKSRPKKI GCYF+G+KTSFDESDDEDSGD A                                          LKQLK+ IDERATSV
Subjt:  DKSITGVQELGIKSRPKKIPGCYFQGRKTSFDESDDEDSGDTA------------------------------------------LKQLKALIDERATSV

Query:  FANYSSKKDALAYLKQ
        FAN SSKKDALAYLKQ
Subjt:  FANYSSKKDALAYLKQ

SwissProt top hitse value%identityAlignment
Q940M0 G-patch domain-containing protein 17.3e-1033.82Show/hide
Query:  DKSITGVQELGIKSRPKKIPGCYFQGRKTSFDESDDEDSGD-----------------------------------------------------------
        DK+  G Q LGIK RPKKI G  ++G+KTSFD SDD+D  D                                                           
Subjt:  DKSITGVQELGIKSRPKKIPGCYFQGRKTSFDESDDEDSGD-----------------------------------------------------------

Query:  ----TALKQLKALIDERATSVFANYSSKKDALAYLK
              LKQLK+LIDE+A SV + +SS+KDA+AYLK
Subjt:  ----TALKQLKALIDERATSVFANYSSKKDALAYLK

Arabidopsis top hitse value%identityAlignment
AT1G63980.1 D111/G-patch domain-containing protein5.2e-1133.82Show/hide
Query:  DKSITGVQELGIKSRPKKIPGCYFQGRKTSFDESDDEDSGD-----------------------------------------------------------
        DK+  G Q LGIK RPKKI G  ++G+KTSFD SDD+D  D                                                           
Subjt:  DKSITGVQELGIKSRPKKIPGCYFQGRKTSFDESDDEDSGD-----------------------------------------------------------

Query:  ----TALKQLKALIDERATSVFANYSSKKDALAYLK
              LKQLK+LIDE+A SV + +SS+KDA+AYLK
Subjt:  ----TALKQLKALIDERATSVFANYSSKKDALAYLK

AT1G63980.2 D111/G-patch domain-containing protein5.2e-1133.82Show/hide
Query:  DKSITGVQELGIKSRPKKIPGCYFQGRKTSFDESDDEDSGD-----------------------------------------------------------
        DK+  G Q LGIK RPKKI G  ++G+KTSFD SDD+D  D                                                           
Subjt:  DKSITGVQELGIKSRPKKIPGCYFQGRKTSFDESDDEDSGD-----------------------------------------------------------

Query:  ----TALKQLKALIDERATSVFANYSSKKDALAYLK
              LKQLK+LIDE+A SV + +SS+KDA+AYLK
Subjt:  ----TALKQLKALIDERATSVFANYSSKKDALAYLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTCCGAAGCTCAATTTGAAGTGTTGGTAGTAGATGCTCTTGGTTGCTTGCTTCCGTGCTCGGGCACGGGATGCTCGGCTGCAGGTCTCTTTGTTCTTGACTGTCA
TTACAAAGACCAGGGAAAGTCCACAAGGAATGAAAAATCAGTGACACGGTATCAACAACCGGGCTCTTTCGTGAGTAAACAGCAGGAGATGGAAACTAAAGCCAACATTG
TCAATCCGAATCCTACTGCATTATCTAAATGTGTTCATTCAAGGCAGAAAGACGAAGGCAAAATACTAAGGTTTCTGGATCAAACACGTCAATTGCGGAACTCAATTAGC
CCAAACAAGGAAAGAGCAAAGAAGATCAGGAGAAGGTTGAATTTCATAAGAATTCCATCACAATTCAGACCCTACCTCAAGTCGAGCAAATTTCCCATTAATAGAAACGA
AACAAACAATCATGAGAAATGGAGGGAAACAGCGAAGATCAAGAAAACGAAAGAAAGAGGGAGAGAAGAAGAAGGAGAAGAAGAAGAAGAAGAAGGAAGCAGAGAAGTGT
TTACAAATTTTAAATGGGTCCATATGATTCTAGAGAACATTGCTTATTGCAATTGTAAGGAGTCAAGATTTCATGTTGAGTTTCTAGATAAATCCATAACTGGAGTGCAA
GAACTGGGTATTAAGAGTAGACCAAAGAAAATACCTGGCTGCTACTTTCAAGGGAGAAAGACTTCCTTTGATGAAAGTGACGATGAAGACTCCGGTGACACCGCACTGAA
GCAGCTGAAAGCTTTGATTGATGAACGTGCCACTTCAGTTTTTGCCAACTATTCTTCTAAGAAAGATGCACTTGCTTACTTGAAACAGGTGCCTAAAATGCCAAAGCACC
AAAGGTATAGAATATTGCACGTTACCTGTAATATTTCTGAGGACATCAAGCTTTTGGCAATTTGTAGGTCCCGGGGCTTGAGTGGAACCAGAGATTCTTGTGGTATCAGT
TGTAAATCGTCGCCTCGTACTCCCAACCATTTAACATTGCAAGCTGGTAATGTAAAGAGCTTCTTCAGTTCTATGTCTTCAGAGTCAACTTCTGCAACAAGTCCAAGTCA
CCTGAAATGGCATATCCAGAAGACCCACAGGCAGTACAGTCCACAACTTCTTGCTCTGGCTCCTATAGGAATTGAAATTGTTCAAGAAGGCCATAACATCCAAGAATTTG
GTTCAGTAGAAGATACCTTAAAAGTGCATGTTGGCCAGAAACCAAGAAACAATACGGCCGGCAACAAGTCCCCTGCTAGATGCCATAATGCCAAGGCTGTAACGGCTACA
TCGAAATCTCCGTCGAACAAAATCACCTTGAACTGTCCTATTGACATGCAACTGAGTCGGAAAATAAGCAGAGTAGCTTGTAGAAGAGCTCCCTCTGCGTCACTCGCTTA
TCCTGAATCAGAATCTGAGAGCACATCTCCATCAGCTTCCACACTACATCACGGAATAGGGAAAAATCGAAGGAGGACCAAAACAGAGGCTAACAAATTGATCCGTACCA
GAGGAAGATTTGAGATGGCTGGAGTGGGGGAGCTGAGAATTCTGAGGAAGTTGAGGACAGCTACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCTCCGAAGCTCAATTTGAAGTGTTGGTAGTAGATGCTCTTGGTTGCTTGCTTCCGTGCTCGGGCACGGGATGCTCGGCTGCAGGTCTCTTTGTTCTTGACTGTCA
TTACAAAGACCAGGGAAAGTCCACAAGGAATGAAAAATCAGTGACACGGTATCAACAACCGGGCTCTTTCGTGAGTAAACAGCAGGAGATGGAAACTAAAGCCAACATTG
TCAATCCGAATCCTACTGCATTATCTAAATGTGTTCATTCAAGGCAGAAAGACGAAGGCAAAATACTAAGGTTTCTGGATCAAACACGTCAATTGCGGAACTCAATTAGC
CCAAACAAGGAAAGAGCAAAGAAGATCAGGAGAAGGTTGAATTTCATAAGAATTCCATCACAATTCAGACCCTACCTCAAGTCGAGCAAATTTCCCATTAATAGAAACGA
AACAAACAATCATGAGAAATGGAGGGAAACAGCGAAGATCAAGAAAACGAAAGAAAGAGGGAGAGAAGAAGAAGGAGAAGAAGAAGAAGAAGAAGGAAGCAGAGAAGTGT
TTACAAATTTTAAATGGGTCCATATGATTCTAGAGAACATTGCTTATTGCAATTGTAAGGAGTCAAGATTTCATGTTGAGTTTCTAGATAAATCCATAACTGGAGTGCAA
GAACTGGGTATTAAGAGTAGACCAAAGAAAATACCTGGCTGCTACTTTCAAGGGAGAAAGACTTCCTTTGATGAAAGTGACGATGAAGACTCCGGTGACACCGCACTGAA
GCAGCTGAAAGCTTTGATTGATGAACGTGCCACTTCAGTTTTTGCCAACTATTCTTCTAAGAAAGATGCACTTGCTTACTTGAAACAGGTGCCTAAAATGCCAAAGCACC
AAAGGTATAGAATATTGCACGTTACCTGTAATATTTCTGAGGACATCAAGCTTTTGGCAATTTGTAGGTCCCGGGGCTTGAGTGGAACCAGAGATTCTTGTGGTATCAGT
TGTAAATCGTCGCCTCGTACTCCCAACCATTTAACATTGCAAGCTGGTAATGTAAAGAGCTTCTTCAGTTCTATGTCTTCAGAGTCAACTTCTGCAACAAGTCCAAGTCA
CCTGAAATGGCATATCCAGAAGACCCACAGGCAGTACAGTCCACAACTTCTTGCTCTGGCTCCTATAGGAATTGAAATTGTTCAAGAAGGCCATAACATCCAAGAATTTG
GTTCAGTAGAAGATACCTTAAAAGTGCATGTTGGCCAGAAACCAAGAAACAATACGGCCGGCAACAAGTCCCCTGCTAGATGCCATAATGCCAAGGCTGTAACGGCTACA
TCGAAATCTCCGTCGAACAAAATCACCTTGAACTGTCCTATTGACATGCAACTGAGTCGGAAAATAAGCAGAGTAGCTTGTAGAAGAGCTCCCTCTGCGTCACTCGCTTA
TCCTGAATCAGAATCTGAGAGCACATCTCCATCAGCTTCCACACTACATCACGGAATAGGGAAAAATCGAAGGAGGACCAAAACAGAGGCTAACAAATTGATCCGTACCA
GAGGAAGATTTGAGATGGCTGGAGTGGGGGAGCTGAGAATTCTGAGGAAGTTGAGGACAGCTACTTGA
Protein sequenceShow/hide protein sequence
MSSEAQFEVLVVDALGCLLPCSGTGCSAAGLFVLDCHYKDQGKSTRNEKSVTRYQQPGSFVSKQQEMETKANIVNPNPTALSKCVHSRQKDEGKILRFLDQTRQLRNSIS
PNKERAKKIRRRLNFIRIPSQFRPYLKSSKFPINRNETNNHEKWRETAKIKKTKERGREEEGEEEEEEGSREVFTNFKWVHMILENIAYCNCKESRFHVEFLDKSITGVQ
ELGIKSRPKKIPGCYFQGRKTSFDESDDEDSGDTALKQLKALIDERATSVFANYSSKKDALAYLKQVPKMPKHQRYRILHVTCNISEDIKLLAICRSRGLSGTRDSCGIS
CKSSPRTPNHLTLQAGNVKSFFSSMSSESTSATSPSHLKWHIQKTHRQYSPQLLALAPIGIEIVQEGHNIQEFGSVEDTLKVHVGQKPRNNTAGNKSPARCHNAKAVTAT
SKSPSNKITLNCPIDMQLSRKISRVACRRAPSASLAYPESESESTSPSASTLHHGIGKNRRRTKTEANKLIRTRGRFEMAGVGELRILRKLRTAT