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Clc01G03070 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G03070
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr01:2823236..2823676
RNA-Seq ExpressionClc01G03070
SyntenyClc01G03070
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2038914.1 hypothetical protein ES319_D03G176800v1 [Gossypium barbadense]1.6e-0449.33Show/hide
Query:  MDVFIPEDYVIRRRIEKKLAAAAAEERQPEAVTARRRISDKEK-------GAAGKNGFRFPTTAADNVVFNCFSA
        MDVFIPE+YVIRRR EKK  A  AEER    V A +R   + K       G+AG NGF       +N+VF+C SA
Subjt:  MDVFIPEDYVIRRRIEKKLAAAAAEERQPEAVTARRRISDKEK-------GAAGKNGFRFPTTAADNVVFNCFSA

KAE8055295.1 hypothetical protein FH972_012146 [Carpinus fangiana]2.1e-0446.05Show/hide
Query:  MDVFIPEDYVIRRRIEKKLAAAAAE-ERQPEAVTARRRISDKEKGAAG-------KNGFRFPTTAADNVVFNCFSA
        MDVFIPE+YV+RRR E+K AA A +      A + RR +  +EK AA        +N F   T  ++NVVF+CFSA
Subjt:  MDVFIPEDYVIRRRIEKKLAAAAAE-ERQPEAVTARRRISDKEKGAAG-------KNGFRFPTTAADNVVFNCFSA

KAE8647863.1 hypothetical protein Csa_000530 [Cucumis sativus]1.6e-1268.57Show/hide
Query:  MDVFIPEDYVIRRRIEKKLAA-AAAEERQPEAVTARRRISDKEKGAAGKNG-FRFPTTAADNVVFNCFSA
        MDVFIP+DYVIRRRIEKKLAA A  + R P     R R SDKEK A  K G FRF  T ADNVVFNCFSA
Subjt:  MDVFIPEDYVIRRRIEKKLAA-AAAEERQPEAVTARRRISDKEKGAAGKNG-FRFPTTAADNVVFNCFSA

MBA0678850.1 hypothetical protein [Gossypium aridum]7.4e-0550.67Show/hide
Query:  MDVFIPEDYVIRRRIEKKLAAAAAEERQPEAVTARRRISDKEK-------GAAGKNGFRFPTTAADNVVFNCFSA
        MDVFIPE+YVIRRR EKK  AA AEER    V A +R   + K       G AG NGF       +N+VF+C SA
Subjt:  MDVFIPEDYVIRRRIEKKLAAAAAEERQPEAVTARRRISDKEK-------GAAGKNGFRFPTTAADNVVFNCFSA

OMO79504.1 hypothetical protein CCACVL1_13647 [Corchorus capsularis]9.6e-0550.63Show/hide
Query:  MDVFIPEDYVIRRRIEKKLAAAAAE--ERQPEAVTARRRISDKEKGAAGKNGFRFPTT---------AADNVVFNCFSA
        MDVFIPE+YVIRRRIEKK AAA     +R PEA     +  +KEK     + FRF +T          A+NVVF+CFSA
Subjt:  MDVFIPEDYVIRRRIEKKLAAAAAE--ERQPEAVTARRRISDKEKGAAGKNGFRFPTT---------AADNVVFNCFSA

TrEMBL top hitse value%identityAlignment
A0A0A0KKA7 Uncharacterized protein7.9e-1368.57Show/hide
Query:  MDVFIPEDYVIRRRIEKKLAA-AAAEERQPEAVTARRRISDKEKGAAGKNG-FRFPTTAADNVVFNCFSA
        MDVFIP+DYVIRRRIEKKLAA A  + R P     R R SDKEK A  K G FRF  T ADNVVFNCFSA
Subjt:  MDVFIPEDYVIRRRIEKKLAA-AAAEERQPEAVTARRRISDKEKGAAGKNG-FRFPTTAADNVVFNCFSA

A0A1R3IAB5 Uncharacterized protein4.7e-0550.63Show/hide
Query:  MDVFIPEDYVIRRRIEKKLAAAAAE--ERQPEAVTARRRISDKEKGAAGKNGFRFPTT---------AADNVVFNCFSA
        MDVFIPE+YVIRRRIEKK AAA     +R PEA     +  +KEK     + FRF +T          A+NVVF+CFSA
Subjt:  MDVFIPEDYVIRRRIEKKLAAAAAE--ERQPEAVTARRRISDKEKGAAGKNGFRFPTT---------AADNVVFNCFSA

A0A5D2VNS4 Uncharacterized protein7.9e-0549.33Show/hide
Query:  MDVFIPEDYVIRRRIEKKLAAAAAEERQPEAVTARRRISDKEK-------GAAGKNGFRFPTTAADNVVFNCFSA
        MDVFIPE+YVIRRR EKK  A  AEER    V A +R   + K       G+AG NGF       +N+VF+C SA
Subjt:  MDVFIPEDYVIRRRIEKKLAAAAAEERQPEAVTARRRISDKEK-------GAAGKNGFRFPTTAADNVVFNCFSA

A0A5J5S8P8 Uncharacterized protein7.9e-0549.33Show/hide
Query:  MDVFIPEDYVIRRRIEKKLAAAAAEERQPEAVTARRRISDKEK-------GAAGKNGFRFPTTAADNVVFNCFSA
        MDVFIPE+YVIRRR EKK  A  AEER    V A +R   + K       G+AG NGF       +N+VF+C SA
Subjt:  MDVFIPEDYVIRRRIEKKLAAAAAEERQPEAVTARRRISDKEK-------GAAGKNGFRFPTTAADNVVFNCFSA

A0A7J8WVF4 Uncharacterized protein (Fragment)3.6e-0550.67Show/hide
Query:  MDVFIPEDYVIRRRIEKKLAAAAAEERQPEAVTARRRISDKEK-------GAAGKNGFRFPTTAADNVVFNCFSA
        MDVFIPE+YVIRRR EKK  AA AEER    V A +R   + K       G AG NGF       +N+VF+C SA
Subjt:  MDVFIPEDYVIRRRIEKKLAAAAAEERQPEAVTARRRISDKEK-------GAAGKNGFRFPTTAADNVVFNCFSA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGTCTTTATTCCCGAAGATTACGTCATTCGCCGTCGCATCGAGAAAAAACTCGCCGCCGCAGCCGCTGAAGAGAGGCAGCCGGAGGCCGTCACCGCACGGCGGAG
GATTTCCGATAAGGAGAAGGGAGCTGCCGGAAAAAATGGATTCCGGTTCCCCACTACCGCCGCCGACAATGTGGTTTTCAATTGCTTCTCTGCTTGA
mRNA sequenceShow/hide mRNA sequence
TTTCTTTCCTTCCTATTCTTCTTCTAAATCTTCTTCTTATTTCCCCAAGATTTTAATTAATCAATTATGGACGTCTTTATTCCCGAAGATTACGTCATTCGCCGTCGCAT
CGAGAAAAAACTCGCCGCCGCAGCCGCTGAAGAGAGGCAGCCGGAGGCCGTCACCGCACGGCGGAGGATTTCCGATAAGGAGAAGGGAGCTGCCGGAAAAAATGGATTCC
GGTTCCCCACTACCGCCGCCGACAATGTGGTTTTCAATTGCTTCTCTGCTTGAGATTCAAGTTCAAGAAATTGCTTCATAGGGTTTATTATAAGGTCTAACTGTATAATT
ATCTTTCTTTAATTTGAGACTTTATAGGATATAATTTATTTATTAGTTACTATTACTACTAACAAAAGTCGACTTAGGAATGATTTATATATTGTTACACAAATGTCCTA
A
Protein sequenceShow/hide protein sequence
MDVFIPEDYVIRRRIEKKLAAAAAEERQPEAVTARRRISDKEKGAAGKNGFRFPTTAADNVVFNCFSA