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Clc01G03155 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G03155
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr01:2898920..2899480
RNA-Seq ExpressionClc01G03155
SyntenyClc01G03155
Gene Ontology termsNA
InterPro domainsIPR037176 - Osmotin/thaumatin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579486.1 hypothetical protein SDJN03_23934, partial [Cucurbita argyrosperma subsp. sororia]3.8e-0741.84Show/hide
Query:  IFFLLFLLSLFSFHFLSIAAS---FHFHKNGLTLSSDDDNDWEFVMNPNTFSSRIWIGNNCKFDEFGQRHKCRTVDCDGGNGGGNFLQSRAYV---DRGG
        +FFLLFLL LFSFHF S AAS       +N   L +D++N   F ++P++  S I +GN                D DG       LQ +AY      G 
Subjt:  IFFLLFLLSLFSFHFLSIAAS---FHFHKNGLTLSSDDDNDWEFVMNPNTFSSRIWIGNNCKFDEFGQRHKCRTVDCDGGNGGGNFLQSRAYV---DRGG

Query:  GSLFRWRA--YADDIFKYVSNKLNNNVGSSNSLVKLLLFVL
        GSL  WRA  Y++DI KYVSN+LNN   ++++LVK++LFVL
Subjt:  GSLFRWRA--YADDIFKYVSNKLNNNVGSSNSLVKLLLFVL

KAG6579487.1 hypothetical protein SDJN03_23935, partial [Cucurbita argyrosperma subsp. sororia]1.9e-0642.61Show/hide
Query:  MGTSI-FFLLFLLSLFSFHFLSIAA---SFHFHKNGLTLSSDDDNDWEFVMNPNTFSSRIWIGNNCKFDEFGQRHKCRTVDCDGGNGGGNFLQSRAYVDR
        MG SI  FL+FLL LFSFH  S AA   +    +  L L SD DN+W FV++P++ SS I +G                         G  LQ +AYVDR
Subjt:  MGTSI-FFLLFLLSLFSFHFLSIAA---SFHFHKNGLTLSSDDDNDWEFVMNPNTFSSRIWIGNNCKFDEFGQRHKCRTVDCDGGNGGGNFLQSRAYVDR

Query:  GGGSLFRWRAYADDI
        G GSL RWRAY D +
Subjt:  GGGSLFRWRAYADDI

KAG6579489.1 hypothetical protein SDJN03_23937, partial [Cucurbita argyrosperma subsp. sororia]3.8e-0741.84Show/hide
Query:  IFFLLFLLSLFSFHFLSIAAS---FHFHKNGLTLSSDDDNDWEFVMNPNTFSSRIWIGNNCKFDEFGQRHKCRTVDCDGGNGGGNFLQSRAYV---DRGG
        +FFLLFLL LFSFHF S AAS       +N   L +D++N   F ++P++  S I +G               T D DG       LQ +AY      G 
Subjt:  IFFLLFLLSLFSFHFLSIAAS---FHFHKNGLTLSSDDDNDWEFVMNPNTFSSRIWIGNNCKFDEFGQRHKCRTVDCDGGNGGGNFLQSRAYV---DRGG

Query:  GSLFRWRA--YADDIFKYVSNKLNNNVGSSNSLVKLLLFVL
        GSL  WRA  Y++DI KYVSN+LNN   ++ +LVK++LFVL
Subjt:  GSLFRWRA--YADDIFKYVSNKLNNNVGSSNSLVKLLLFVL

KAG6579490.1 hypothetical protein SDJN03_23938, partial [Cucurbita argyrosperma subsp. sororia]1.7e-0744.35Show/hide
Query:  MGTSI-FFLLFLLSLFSFHFLSIAASFHFHKNGLTLS---SDDDNDWEFVMNPNTFSSRIWIGNNCKFDEFGQRHKCRTVDCDGGNGGGNFLQSRAYVDR
        MG SI  FL+FLL LFSFH  S AAS     +  TL    SD DN+W FV++P++ SS I +G                         G  LQ RAYVDR
Subjt:  MGTSI-FFLLFLLSLFSFHFLSIAASFHFHKNGLTLS---SDDDNDWEFVMNPNTFSSRIWIGNNCKFDEFGQRHKCRTVDCDGGNGGGNFLQSRAYVDR

Query:  GGGSLFRWRAYADDI
        G GSL RWRAY D +
Subjt:  GGGSLFRWRAYADDI

KGN50133.1 hypothetical protein Csa_000073 [Cucumis sativus]5.6e-3563.83Show/hide
Query:  MGTSIFFLLFLLSLFSFHF-LSIAASFHFHKNG-LTLSSDDDND-WEFVMNPNTFSSRIWIGNNCKFDEFGQRHKCRTVDCDGGNGGGN-FLQSRAYVDR
        MGT IFF LF++SLFSFHF LS AASF  H+NG  T S DD+ND W FVMNPNTFSS IWIG  CKFD      KC T DC  G+G  + FLQ +A+VD+
Subjt:  MGTSIFFLLFLLSLFSFHF-LSIAASFHFHKNG-LTLSSDDDND-WEFVMNPNTFSSRIWIGNNCKFDEFGQRHKCRTVDCDGGNGGGN-FLQSRAYVDR

Query:  GGGSLFRWRAYADDIFKYVSNKLNNNVGSSNSLVKLLLFVL
        GGGS FRWR YA+DI KYV +KLN+N+ +S SLVKLL+FV+
Subjt:  GGGSLFRWRAYADDIFKYVSNKLNNNVGSSNSLVKLLLFVL

TrEMBL top hitse value%identityAlignment
A0A0A0KKL7 Uncharacterized protein2.7e-3563.83Show/hide
Query:  MGTSIFFLLFLLSLFSFHF-LSIAASFHFHKNG-LTLSSDDDND-WEFVMNPNTFSSRIWIGNNCKFDEFGQRHKCRTVDCDGGNGGGN-FLQSRAYVDR
        MGT IFF LF++SLFSFHF LS AASF  H+NG  T S DD+ND W FVMNPNTFSS IWIG  CKFD      KC T DC  G+G  + FLQ +A+VD+
Subjt:  MGTSIFFLLFLLSLFSFHF-LSIAASFHFHKNG-LTLSSDDDND-WEFVMNPNTFSSRIWIGNNCKFDEFGQRHKCRTVDCDGGNGGGN-FLQSRAYVDR

Query:  GGGSLFRWRAYADDIFKYVSNKLNNNVGSSNSLVKLLLFVL
        GGGS FRWR YA+DI KYV +KLN+N+ +S SLVKLL+FV+
Subjt:  GGGSLFRWRAYADDIFKYVSNKLNNNVGSSNSLVKLLLFVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAACCTCCATTTTCTTTCTCCTCTTTCTTCTTTCTCTTTTCTCCTTCCATTTCCTCTCCATTGCAGCTTCTTTTCACTTCCACAAAAATGGTCTCACTCTTTCTTC
GGACGACGATAATGATTGGGAATTTGTCATGAACCCCAACACTTTTAGCTCCCGCATTTGGATTGGAAACAACTGTAAATTTGACGAATTCGGGCAGCGCCACAAATGTC
GAACCGTTGACTGTGACGGTGGCAACGGTGGTGGCAACTTCCTTCAAAGCCGAGCTTATGTGGACCGGGGCGGTGGCAGCCTTTTCCGGTGGCGAGCTTACGCAGATGAC
ATCTTCAAATATGTGTCAAACAAATTGAATAATAATGTTGGGAGTAGCAATAGTTTAGTTAAATTATTGTTATTTGTGCTCTGTGAGTTTGAAAATGACGCTTGTAGTTT
TCATCTTGAACTGCTTGTGAAAAACAACTTCAAGGAGTTTGATGAGATATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAACCTCCATTTTCTTTCTCCTCTTTCTTCTTTCTCTTTTCTCCTTCCATTTCCTCTCCATTGCAGCTTCTTTTCACTTCCACAAAAATGGTCTCACTCTTTCTTC
GGACGACGATAATGATTGGGAATTTGTCATGAACCCCAACACTTTTAGCTCCCGCATTTGGATTGGAAACAACTGTAAATTTGACGAATTCGGGCAGCGCCACAAATGTC
GAACCGTTGACTGTGACGGTGGCAACGGTGGTGGCAACTTCCTTCAAAGCCGAGCTTATGTGGACCGGGGCGGTGGCAGCCTTTTCCGGTGGCGAGCTTACGCAGATGAC
ATCTTCAAATATGTGTCAAACAAATTGAATAATAATGTTGGGAGTAGCAATAGTTTAGTTAAATTATTGTTATTTGTGCTCTGTGAGTTTGAAAATGACGCTTGTAGTTT
TCATCTTGAACTGCTTGTGAAAAACAACTTCAAGGAGTTTGATGAGATATAA
Protein sequenceShow/hide protein sequence
MGTSIFFLLFLLSLFSFHFLSIAASFHFHKNGLTLSSDDDNDWEFVMNPNTFSSRIWIGNNCKFDEFGQRHKCRTVDCDGGNGGGNFLQSRAYVDRGGGSLFRWRAYADD
IFKYVSNKLNNNVGSSNSLVKLLLFVLCEFENDACSFHLELLVKNNFKEFDEI