; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc01G03475 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G03475
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionBHLH transcription factor
Genome locationClcChr01:3253697..3255549
RNA-Seq ExpressionClc01G03475
SyntenyClc01G03475
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:2000112 - regulation of cellular macromolecule biosynthetic process (biological process)
GO:0090575 - RNA polymerase II transcription factor complex (cellular component)
GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR015660 - Achaete-scute transcription factor-related
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042815.1 transcription factor bHLH120-like protein [Cucumis melo var. makuwa]3.5e-7866.8Show/hide
Query:  FNVESPFPFDLGDDLFPLPSLPSSS-ISPSSDN-SNSACKTQKNGRRKKPAPNSHNSE------NDEQKKKLIHRDVERQRRREMSFLYTTLRSLLPLEY
        FNVESPF FDLG+DL PLPSLPSSS ISP  DN  N   +  KNGRRKKP PN+ N +      ++++KKK+IHRDVERQRR+EMS LYTTLRSLLPLEY
Subjt:  FNVESPFPFDLGDDLFPLPSLPSSS-ISPSSDN-SNSACKTQKNGRRKKPAPNSHNSE------NDEQKKKLIHRDVERQRRREMSFLYTTLRSLLPLEY

Query:  LKGKRSISDHMQETVNYIQYMQRRIQQLSDKRDELRKLSDENMASISMVETLNSSKRDLVVVRSKNELGIQIILDTGIKHRFPISNLLPVLVAEGLENIT
        LKGKRSISDHMQETV+YIQ+MQRRIQQL DKRD+LR+L+++ M  I   ETLNSS+RD VVVR+K+ +GIQ++LDT  KHR P+S  +  LVAEGLE + 
Subjt:  LKGKRSISDHMQETVNYIQYMQRRIQQLSDKRDELRKLSDENMASISMVETLNSSKRDLVVVRSKNELGIQIILDTGIKHRFPISNLLPVLVAEGLENIT

Query:  CASNRLNERFIHIIECQPIVNNDGFYQS--KSRLQHKLTNLEYFPID
        C SNRLNERFIH IECQ I+ +DG Y +   S LQHKL NLEY+P+D
Subjt:  CASNRLNERFIHIIECQPIVNNDGFYQS--KSRLQHKLTNLEYFPID

KAG6579462.1 Transcription factor basic helix-loop-helix 120, partial [Cucurbita argyrosperma subsp. sororia]1.4e-7463.64Show/hide
Query:  MEFNVESPFPFDLGDDLFPLPSL---------PSSSISPSSDNSNSACKTQKNGRRKKPAPNSHNSE--NDEQKKKLIHRDVERQRRREMSFLYTTLRSL
        MEFN+ESPF FD+GD+LFPLPS+         P     P  DN  SA K  K   R+ P PN+ N E  ND+++KK++HRDVERQRR+EMS LY++LRSL
Subjt:  MEFNVESPFPFDLGDDLFPLPSL---------PSSSISPSSDNSNSACKTQKNGRRKKPAPNSHNSE--NDEQKKKLIHRDVERQRRREMSFLYTTLRSL

Query:  LPLEYLKGKRSISDHMQETVNYIQYMQRRIQQLSDKRDELRKLSDENMASISMVETLNSSKRDLVVVRSKNELGIQIILDTGIKHRFPISNLLPVLVAEG
        LPLEYLKGKRSISDHM ETV YIQYMQRRI+QLSDKRDEL+ LS ENMA + MVETLNSS+RD VVVRSKN LGIQ++LDT  +HR P+SN+L VL  EG
Subjt:  LPLEYLKGKRSISDHMQETVNYIQYMQRRIQQLSDKRDELRKLSDENMASISMVETLNSSKRDLVVVRSKNELGIQIILDTGIKHRFPISNLLPVLVAEG

Query:  LENITCASNRLNERFIHIIECQPIVNNDGFYQS--KSRLQHKLTN-LEYFPID
        LE ++C + ++NER++H IECQ  V NDGFY S     LQHKLTN LEY P+D
Subjt:  LENITCASNRLNERFIHIIECQPIVNNDGFYQS--KSRLQHKLTN-LEYFPID

NP_001295816.1 transcription factor bHLH118-like [Cucumis sativus]5.8e-7363.71Show/hide
Query:  FNVESPFPFDLGDDLFPLPSLPSSS-ISPSSDN-SNSACKTQKNGRRKKPAPNSHNSE------NDEQKKKLIHRDVERQRRREMSFLYTTLRSLLPLEY
        FN ESPF FD+G+DL PLPSLPSSS ISP  DN  N   +  KNGRRKKP PN+ N +      ++++KKK+IHRDVERQRR+EMS LYTTLRSLLPLEY
Subjt:  FNVESPFPFDLGDDLFPLPSLPSSS-ISPSSDN-SNSACKTQKNGRRKKPAPNSHNSE------NDEQKKKLIHRDVERQRRREMSFLYTTLRSLLPLEY

Query:  LKGKRSISDHMQETVNYIQYMQRRIQQLSDKRDELRKLSDENMASIS-MVETLNSSKRDLVVVRSKNELGIQIILDTGIKHRFPISNLLPVLVAEGLENI
        LKGKRSISDHMQETV+YIQ+MQRRIQQL DKR  LR+L+ +   +I+   ETLNSS+R   VVR+K+ +GIQ++LDT  K R P+S  +  LV+EGLE +
Subjt:  LKGKRSISDHMQETVNYIQYMQRRIQQLSDKRDELRKLSDENMASIS-MVETLNSSKRDLVVVRSKNELGIQIILDTGIKHRFPISNLLPVLVAEGLENI

Query:  TCASNRLNERFIHIIECQPIVNNDGFYQS--KSRLQHKLTNLEYFPID
         C SNRLNERFIH IECQP++N+DG Y +   S LQHKL NLEY+P+D
Subjt:  TCASNRLNERFIHIIECQPIVNNDGFYQS--KSRLQHKLTNLEYFPID

XP_022922335.1 transcription factor bHLH118-like [Cucurbita moschata]9.0e-7463.64Show/hide
Query:  MEFNVESPFPFDLGDDLFPLPSLPS----------SSISPSSDNSNSACKTQKNGRRKKPAPNSHNSE--NDEQKKKLIHRDVERQRRREMSFLYTTLRS
        MEFN+ESP  FDLGD+LFPLPS+ S           SISP  +N  SA K  K   R+ P PN+ N E  ND+++KK++HRDVERQRR+EMS LY++LRS
Subjt:  MEFNVESPFPFDLGDDLFPLPSLPS----------SSISPSSDNSNSACKTQKNGRRKKPAPNSHNSE--NDEQKKKLIHRDVERQRRREMSFLYTTLRS

Query:  LLPLEYLKGKRSISDHMQETVNYIQYMQRRIQQLSDKRDELRKLSDENMASISMVETLNSSKRDLVVVRSKNELGIQIILDTGIKHRFPISNLLPVLVAE
        LLPLEYLKGK SISDHM ETV YIQYMQRRI+QLSDKRDEL+ LS ENMA + MVETLNSS+RD VVVRSKN LGIQ++LDT  +HR P+SN+L VL  E
Subjt:  LLPLEYLKGKRSISDHMQETVNYIQYMQRRIQQLSDKRDELRKLSDENMASISMVETLNSSKRDLVVVRSKNELGIQIILDTGIKHRFPISNLLPVLVAE

Query:  GLENITCASNRLNERFIHIIECQPIVNNDGFYQS--KSRLQHKLTNLEYFPID
        GLE ++C + ++NER++H IECQ  V +DGFY S     LQHKLTNLEY P+D
Subjt:  GLENITCASNRLNERFIHIIECQPIVNNDGFYQS--KSRLQHKLTNLEYFPID

XP_038875626.1 transcription factor bHLH118-like [Benincasa hispida]6.2e-8368.55Show/hide
Query:  MEFNVESPFPFDLGDDLFPLPSLPSSSI--SPSSDNSNSACKTQKNGRRKKPAPNSHN-----SENDEQKKKLIHRDVERQRRREMSFLYTTLRSLLPLE
        M+FNVESP  FDLGDDL PLPSLPSSS    P  +  N   + QKNGRRKKP PN+ N     S N+E+KKK+IHRDVERQRR+EMS LYTTLRSLLPLE
Subjt:  MEFNVESPFPFDLGDDLFPLPSLPSSSI--SPSSDNSNSACKTQKNGRRKKPAPNSHN-----SENDEQKKKLIHRDVERQRRREMSFLYTTLRSLLPLE

Query:  YLKGKRSISDHMQETVNYIQYMQRRIQQLSDKRDELRKLSDENMASISMVETLNSSKRDLVVVRSKNELGIQIILDTGIKHRFPISNLLPVLVAEGLENI
        YLKGKRSISDH+ ETVNYIQ+MQ RIQQLSDKRDELRKLS+   A++   +TLNSS+RD VVVR K+ +GIQ+++DT  KHRFP+SN L  L AEGLE +
Subjt:  YLKGKRSISDHMQETVNYIQYMQRRIQQLSDKRDELRKLSDENMASISMVETLNSSKRDLVVVRSKNELGIQIILDTGIKHRFPISNLLPVLVAEGLENI

Query:  TCASNRLNERFIHIIECQPIVNNDGFYQSKS--RLQHKLTNLEYFPID
        +C SNRLNERFIH IECQPI+NNDG Y +     L HKLTNLEYFP+D
Subjt:  TCASNRLNERFIHIIECQPIVNNDGFYQSKS--RLQHKLTNLEYFPID

TrEMBL top hitse value%identityAlignment
A0A097IYN6 BHLH transcription factor2.8e-7363.71Show/hide
Query:  FNVESPFPFDLGDDLFPLPSLPSSS-ISPSSDN-SNSACKTQKNGRRKKPAPNSHNSE------NDEQKKKLIHRDVERQRRREMSFLYTTLRSLLPLEY
        FN ESPF FD+G+DL PLPSLPSSS ISP  DN  N   +  KNGRRKKP PN+ N +      ++++KKK+IHRDVERQRR+EMS LYTTLRSLLPLEY
Subjt:  FNVESPFPFDLGDDLFPLPSLPSSS-ISPSSDN-SNSACKTQKNGRRKKPAPNSHNSE------NDEQKKKLIHRDVERQRRREMSFLYTTLRSLLPLEY

Query:  LKGKRSISDHMQETVNYIQYMQRRIQQLSDKRDELRKLSDENMASIS-MVETLNSSKRDLVVVRSKNELGIQIILDTGIKHRFPISNLLPVLVAEGLENI
        LKGKRSISDHMQETV+YIQ+MQRRIQQL DKR  LR+L+ +   +I+   ETLNSS+R   VVR+K+ +GIQ++LDT  K R P+S  +  LV+EGLE +
Subjt:  LKGKRSISDHMQETVNYIQYMQRRIQQLSDKRDELRKLSDENMASIS-MVETLNSSKRDLVVVRSKNELGIQIILDTGIKHRFPISNLLPVLVAEGLENI

Query:  TCASNRLNERFIHIIECQPIVNNDGFYQS--KSRLQHKLTNLEYFPID
         C SNRLNERFIH IECQP++N+DG Y +   S LQHKL NLEY+P+D
Subjt:  TCASNRLNERFIHIIECQPIVNNDGFYQS--KSRLQHKLTNLEYFPID

A0A5A7TLF7 Transcription factor bHLH36-like1.0e-5954.12Show/hide
Query:  NVESPFPFDLGDDLFPLPSLP----------SSSISPSSDNSNSACKTQKNGRRKKPAPNS------HNSENDEQKKKLIHRDVERQRRREMSFLYTTLR
        NVESPF FDLGD+L PLPSL            S +  +++NS +     KNGRRKKP  N+       N+ N+ +KKK++HRDVERQRR+EMS LY+TLR
Subjt:  NVESPFPFDLGDDLFPLPSLP----------SSSISPSSDNSNSACKTQKNGRRKKPAPNS------HNSENDEQKKKLIHRDVERQRRREMSFLYTTLR

Query:  SLLPLEYLKGKRSISDHMQETVNYIQYMQRRIQQLSDKRDELRKLSDENM-ASISMVETLNSSKRDLVVVRSKN-ELGIQIILDTGIKHRFPISNLLPVL
        SLLP+EYLKGKRSI DHM ETV YI+YMQ +IQ+L DKRDEL+KL   N    +   ETL S+KRD VVVR+++   GIQ+ILDT  +HR P+SN+L  L
Subjt:  SLLPLEYLKGKRSISDHMQETVNYIQYMQRRIQQLSDKRDELRKLSDENM-ASISMVETLNSSKRDLVVVRSKN-ELGIQIILDTGIKHRFPISNLLPVL

Query:  VAEGLENITCASNRLNERFIHIIECQPI-VNNDGFYQSKSRLQHKLTNLEYFPID
          +GLE ++C+SN+LN+RF+H IE QP+  + +      S LQ+ LTNLEY P+D
Subjt:  VAEGLENITCASNRLNERFIHIIECQPI-VNNDGFYQSKSRLQHKLTNLEYFPID

A0A5A7TN30 Transcription factor bHLH120-like protein1.7e-7866.8Show/hide
Query:  FNVESPFPFDLGDDLFPLPSLPSSS-ISPSSDN-SNSACKTQKNGRRKKPAPNSHNSE------NDEQKKKLIHRDVERQRRREMSFLYTTLRSLLPLEY
        FNVESPF FDLG+DL PLPSLPSSS ISP  DN  N   +  KNGRRKKP PN+ N +      ++++KKK+IHRDVERQRR+EMS LYTTLRSLLPLEY
Subjt:  FNVESPFPFDLGDDLFPLPSLPSSS-ISPSSDN-SNSACKTQKNGRRKKPAPNSHNSE------NDEQKKKLIHRDVERQRRREMSFLYTTLRSLLPLEY

Query:  LKGKRSISDHMQETVNYIQYMQRRIQQLSDKRDELRKLSDENMASISMVETLNSSKRDLVVVRSKNELGIQIILDTGIKHRFPISNLLPVLVAEGLENIT
        LKGKRSISDHMQETV+YIQ+MQRRIQQL DKRD+LR+L+++ M  I   ETLNSS+RD VVVR+K+ +GIQ++LDT  KHR P+S  +  LVAEGLE + 
Subjt:  LKGKRSISDHMQETVNYIQYMQRRIQQLSDKRDELRKLSDENMASISMVETLNSSKRDLVVVRSKNELGIQIILDTGIKHRFPISNLLPVLVAEGLENIT

Query:  CASNRLNERFIHIIECQPIVNNDGFYQS--KSRLQHKLTNLEYFPID
        C SNRLNERFIH IECQ I+ +DG Y +   S LQHKL NLEY+P+D
Subjt:  CASNRLNERFIHIIECQPIVNNDGFYQS--KSRLQHKLTNLEYFPID

A0A6J1E8G7 transcription factor bHLH118-like4.4e-7463.64Show/hide
Query:  MEFNVESPFPFDLGDDLFPLPSLPS----------SSISPSSDNSNSACKTQKNGRRKKPAPNSHNSE--NDEQKKKLIHRDVERQRRREMSFLYTTLRS
        MEFN+ESP  FDLGD+LFPLPS+ S           SISP  +N  SA K  K   R+ P PN+ N E  ND+++KK++HRDVERQRR+EMS LY++LRS
Subjt:  MEFNVESPFPFDLGDDLFPLPSLPS----------SSISPSSDNSNSACKTQKNGRRKKPAPNSHNSE--NDEQKKKLIHRDVERQRRREMSFLYTTLRS

Query:  LLPLEYLKGKRSISDHMQETVNYIQYMQRRIQQLSDKRDELRKLSDENMASISMVETLNSSKRDLVVVRSKNELGIQIILDTGIKHRFPISNLLPVLVAE
        LLPLEYLKGK SISDHM ETV YIQYMQRRI+QLSDKRDEL+ LS ENMA + MVETLNSS+RD VVVRSKN LGIQ++LDT  +HR P+SN+L VL  E
Subjt:  LLPLEYLKGKRSISDHMQETVNYIQYMQRRIQQLSDKRDELRKLSDENMASISMVETLNSSKRDLVVVRSKNELGIQIILDTGIKHRFPISNLLPVLVAE

Query:  GLENITCASNRLNERFIHIIECQPIVNNDGFYQS--KSRLQHKLTNLEYFPID
        GLE ++C + ++NER++H IECQ  V +DGFY S     LQHKLTNLEY P+D
Subjt:  GLENITCASNRLNERFIHIIECQPIVNNDGFYQS--KSRLQHKLTNLEYFPID

A0A6J1I182 transcription factor bHLH120-like2.3e-6760.08Show/hide
Query:  MEFNVESPFPFDLGDDLFPLPSLPSSSISPSSDNSNSACKTQKNGRRKKPAPNSHNSE--NDEQKKKLIHRDVERQRRREMSFLYTTLRSLLPLEYLKGK
        MEFN+ESPF F+ GD+LFPLP      ISP  +N+N A K  K   R++P PN+ N E  N++++KK++HRDVERQRR+EMS LY++LRSLLPLEYLKGK
Subjt:  MEFNVESPFPFDLGDDLFPLPSLPSSSISPSSDNSNSACKTQKNGRRKKPAPNSHNSE--NDEQKKKLIHRDVERQRRREMSFLYTTLRSLLPLEYLKGK

Query:  RSISDHMQETVNYIQYMQRRIQQLSDKRDELRKLSDENMASISMVETLNSSKRDLVVVRSKNELGIQIILDTGIKHRFPISNLLPVLVAEGLENITCASN
        RSISDHM ETV YIQ +Q RIQQLS++RDEL+ LS ENM  +  VETLNSS+RD VVV S N LGIQ++LDT I+HR P+S++L VL+AEGLE ++C + 
Subjt:  RSISDHMQETVNYIQYMQRRIQQLSDKRDELRKLSDENMASISMVETLNSSKRDLVVVRSKNELGIQIILDTGIKHRFPISNLLPVLVAEGLENITCASN

Query:  RLNERFIHIIECQPIVNNDGFYQSKS--RLQHKLTNLEYFPID
        ++NER++H IECQ +V NDG Y S     L+H+L NLEY P++
Subjt:  RLNERFIHIIECQPIVNNDGFYQSKS--RLQHKLTNLEYFPID

SwissProt top hitse value%identityAlignment
Q9FLI0 Transcription factor bHLH1201.3e-1939.77Show/hide
Query:  KKPAPNSH-NSENDEQK--KKLIHRDVERQRRREMSFLYTTLRSLLPLEYLKGKRSISDHMQETVNYIQYMQRRIQQLSDKRDEL-RKLSDENMASISMV
        KK    SH   E DE K  KKL+HR++ERQRR+EM+ L+ +LRS LPL+Y+KGKR++SDH+   V++I+  Q RI+ LS +RDEL R++ D    + S  
Subjt:  KKPAPNSH-NSENDEQK--KKLIHRDVERQRRREMSFLYTTLRSLLPLEYLKGKRSISDHMQETVNYIQYMQRRIQQLSDKRDEL-RKLSDENMASISMV

Query:  ETLNSSKRDLVVVRSKNELGIQII---LDTGIKHRFPISNLLPVLVAEGLENITCASNRLNERFIHIIECQ
         + +S      V+      G +++   L +G++  +P+S +L VL  +GLE I+  + R+NER ++ I+ +
Subjt:  ETLNSSKRDLVVVRSKNELGIQII---LDTGIKHRFPISNLLPVLVAEGLENITCASNRLNERFIHIIECQ

Q9FLI1 Transcription factor bHLH361.6e-2036.46Show/hide
Query:  KKLIHRDVERQRRREMSFLYTTLRSLLPLEYLKGKRSISDHMQETVNYIQYMQRRIQQLSDKRDELRKLSDENMASISMVETLNSSKRDLVVVRSKNE--
        +K++HR+ ERQRR+EM+ LY +LRSLLPL ++KGKRS SD + E VNYI+Y+QR+I++LS +RD+L  LS  ++   S        K D+ ++  KN   
Subjt:  KKLIHRDVERQRRREMSFLYTTLRSLLPLEYLKGKRSISDHMQETVNYIQYMQRRIQQLSDKRDELRKLSDENMASISMVETLNSSKRDLVVVRSKNE--

Query:  -----LGIQIILDT---GIKHRFPISNLLPVLVAEGLENITCASNRLNERFIHIIECQPIVNNDGFYQSKSRLQHKLTNLE
             +G++I+L +   G + RF  S++L VL   GL  +   S+ +++R ++ I+ +  VN+       + L+ +L  ++
Subjt:  -----LGIQIILDT---GIKHRFPISNLLPVLVAEGLENITCASNRLNERFIHIIECQPIVNNDGFYQSKSRLQHKLTNLE

Q9LQ08 Transcription factor bHLH1256.6e-1933.89Show/hide
Query:  APNSHNSENDEQKKKLIHRDVERQRRREMSFLYTTLRSLLPLEYLKGKRSISDHMQETVNYIQYMQRRIQQLSDKRDELRKLSDENMASISMVE------
        A  ++ +++D + KK+ HRD+ERQRR+E+S L+  LR+LLP +Y++GKRS SDH+ + VNYI+ +Q +I++L++KR+ ++K+      + S +E      
Subjt:  APNSHNSENDEQKKKLIHRDVERQRRREMSFLYTTLRSLLPLEYLKGKRSISDHMQETVNYIQYMQRRIQQLSDKRDELRKLSDENMASISMVE------

Query:  ------TLNSS-----KRDLVVVRSKNELGIQIILDTGI-KHRFPISNLLPVLVAE-GLENITCASNRLNERFIHIIECQ
              TL+SS      + + VV +   +G++II+   + +++  +S++L +L  E     ++C S R  +RF+H I  Q
Subjt:  ------TLNSS-----KRDLVVVRSKNELGIQIILDTGI-KHRFPISNLLPVLVAE-GLENITCASNRLNERFIHIIECQ

Q9STJ6 Transcription factor bHLH1265.4e-2134.71Show/hide
Query:  SHNSENDEQKKKLIHRDVERQRRREMSFLYTTLRSLLPLEYLKGKRSISDHMQETVNYIQYMQRRIQQLSDKRDELRKLSDENMASISMVETLNS---SK
        +H ++++++KKKL+HRD+ERQRR+EM+ L+ TLR+ LPL+Y+KGKR++SDH+   VN+I+  + RI++LS +RDEL + + +   S        S     
Subjt:  SHNSENDEQKKKLIHRDVERQRRREMSFLYTTLRSLLPLEYLKGKRSISDHMQETVNYIQYMQRRIQQLSDKRDELRKLSDENMASISMVETLNS---SK

Query:  RDLVVVRSKNELGIQIILDTGIK--HRFPISNLLPVLVAEGLENITCASNRLNERFIHIIECQPIVNNDG
            V+   +  G+++++ +        P+S +L  +  +GLE ++  + R+N+R +H I+ +  VN+ G
Subjt:  RDLVVVRSKNELGIQIILDTGIK--HRFPISNLLPVLVAEGLENITCASNRLNERFIHIIECQPIVNNDG

Q9STJ7 Transcription factor bHLH1183.0e-1939.86Show/hide
Query:  KKLIHRDVERQRRREMSFLYTTLRSLLPLEYLKGKRSISDHMQETVNYIQYMQRRIQQLSDKRDELRKLSDENMASISMVETLNSSKRDLVVVRSKNELG
        +KL+H+++E++RR+EM+ LY +LRSLLPLE+++GKRS SD ++  VNYI Y+QR I+ ++ KRD+L  LS  +  S +  E    S    VV+R    +G
Subjt:  KKLIHRDVERQRRREMSFLYTTLRSLLPLEYLKGKRSISDHMQETVNYIQYMQRRIQQLSDKRDELRKLSDENMASISMVETLNSSKRDLVVVRSKNELG

Query:  IQIILDTGIKHRFPISNLLPVLVAEGLENITCASNRLNERFIHIIECQ
        I+I+L      + P S++L VL   GL  +    + +N+R IH ++ +
Subjt:  IQIILDTGIKHRFPISNLLPVLVAEGLENITCASNRLNERFIHIIECQ

Arabidopsis top hitse value%identityAlignment
AT1G62975.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein4.7e-2033.89Show/hide
Query:  APNSHNSENDEQKKKLIHRDVERQRRREMSFLYTTLRSLLPLEYLKGKRSISDHMQETVNYIQYMQRRIQQLSDKRDELRKLSDENMASISMVE------
        A  ++ +++D + KK+ HRD+ERQRR+E+S L+  LR+LLP +Y++GKRS SDH+ + VNYI+ +Q +I++L++KR+ ++K+      + S +E      
Subjt:  APNSHNSENDEQKKKLIHRDVERQRRREMSFLYTTLRSLLPLEYLKGKRSISDHMQETVNYIQYMQRRIQQLSDKRDELRKLSDENMASISMVE------

Query:  ------TLNSS-----KRDLVVVRSKNELGIQIILDTGI-KHRFPISNLLPVLVAE-GLENITCASNRLNERFIHIIECQ
              TL+SS      + + VV +   +G++II+   + +++  +S++L +L  E     ++C S R  +RF+H I  Q
Subjt:  ------TLNSS-----KRDLVVVRSKNELGIQIILDTGI-KHRFPISNLLPVLVAE-GLENITCASNRLNERFIHIIECQ

AT4G25400.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein2.1e-2039.86Show/hide
Query:  KKLIHRDVERQRRREMSFLYTTLRSLLPLEYLKGKRSISDHMQETVNYIQYMQRRIQQLSDKRDELRKLSDENMASISMVETLNSSKRDLVVVRSKNELG
        +KL+H+++E++RR+EM+ LY +LRSLLPLE+++GKRS SD ++  VNYI Y+QR I+ ++ KRD+L  LS  +  S +  E    S    VV+R    +G
Subjt:  KKLIHRDVERQRRREMSFLYTTLRSLLPLEYLKGKRSISDHMQETVNYIQYMQRRIQQLSDKRDELRKLSDENMASISMVETLNSSKRDLVVVRSKNELG

Query:  IQIILDTGIKHRFPISNLLPVLVAEGLENITCASNRLNERFIHIIECQ
        I+I+L      + P S++L VL   GL  +    + +N+R IH ++ +
Subjt:  IQIILDTGIKHRFPISNLLPVLVAEGLENITCASNRLNERFIHIIECQ

AT4G25410.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein3.8e-2234.71Show/hide
Query:  SHNSENDEQKKKLIHRDVERQRRREMSFLYTTLRSLLPLEYLKGKRSISDHMQETVNYIQYMQRRIQQLSDKRDELRKLSDENMASISMVETLNS---SK
        +H ++++++KKKL+HRD+ERQRR+EM+ L+ TLR+ LPL+Y+KGKR++SDH+   VN+I+  + RI++LS +RDEL + + +   S        S     
Subjt:  SHNSENDEQKKKLIHRDVERQRRREMSFLYTTLRSLLPLEYLKGKRSISDHMQETVNYIQYMQRRIQQLSDKRDELRKLSDENMASISMVETLNS---SK

Query:  RDLVVVRSKNELGIQIILDTGIK--HRFPISNLLPVLVAEGLENITCASNRLNERFIHIIECQPIVNNDG
            V+   +  G+++++ +        P+S +L  +  +GLE ++  + R+N+R +H I+ +  VN+ G
Subjt:  RDLVVVRSKNELGIQIILDTGIK--HRFPISNLLPVLVAEGLENITCASNRLNERFIHIIECQPIVNNDG

AT5G51780.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.1e-2136.46Show/hide
Query:  KKLIHRDVERQRRREMSFLYTTLRSLLPLEYLKGKRSISDHMQETVNYIQYMQRRIQQLSDKRDELRKLSDENMASISMVETLNSSKRDLVVVRSKNE--
        +K++HR+ ERQRR+EM+ LY +LRSLLPL ++KGKRS SD + E VNYI+Y+QR+I++LS +RD+L  LS  ++   S        K D+ ++  KN   
Subjt:  KKLIHRDVERQRRREMSFLYTTLRSLLPLEYLKGKRSISDHMQETVNYIQYMQRRIQQLSDKRDELRKLSDENMASISMVETLNSSKRDLVVVRSKNE--

Query:  -----LGIQIILDT---GIKHRFPISNLLPVLVAEGLENITCASNRLNERFIHIIECQPIVNNDGFYQSKSRLQHKLTNLE
             +G++I+L +   G + RF  S++L VL   GL  +   S+ +++R ++ I+ +  VN+       + L+ +L  ++
Subjt:  -----LGIQIILDT---GIKHRFPISNLLPVLVAEGLENITCASNRLNERFIHIIECQPIVNNDGFYQSKSRLQHKLTNLE

AT5G51790.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein9.4e-2139.77Show/hide
Query:  KKPAPNSH-NSENDEQK--KKLIHRDVERQRRREMSFLYTTLRSLLPLEYLKGKRSISDHMQETVNYIQYMQRRIQQLSDKRDEL-RKLSDENMASISMV
        KK    SH   E DE K  KKL+HR++ERQRR+EM+ L+ +LRS LPL+Y+KGKR++SDH+   V++I+  Q RI+ LS +RDEL R++ D    + S  
Subjt:  KKPAPNSH-NSENDEQK--KKLIHRDVERQRRREMSFLYTTLRSLLPLEYLKGKRSISDHMQETVNYIQYMQRRIQQLSDKRDEL-RKLSDENMASISMV

Query:  ETLNSSKRDLVVVRSKNELGIQII---LDTGIKHRFPISNLLPVLVAEGLENITCASNRLNERFIHIIECQ
         + +S      V+      G +++   L +G++  +P+S +L VL  +GLE I+  + R+NER ++ I+ +
Subjt:  ETLNSSKRDLVVVRSKNELGIQII---LDTGIKHRFPISNLLPVLVAEGLENITCASNRLNERFIHIIECQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTCAATGTTGAATCCCCCTTTCCTTTTGACTTAGGAGATGACTTATTTCCTTTGCCTTCTCTTCCATCGTCTTCCATCTCTCCATCTTCGGACAACAGTAACAG
TGCCTGCAAAACACAAAAAAATGGCCGCCGGAAAAAGCCAGCGCCCAACTCTCACAATAGTGAGAATGACGAACAAAAAAAGAAGTTAATACATAGAGATGTGGAACGAC
AAAGAAGACGAGAAATGTCTTTTCTTTACACCACACTTCGCTCACTTCTCCCTCTTGAATACCTCAAGGGAAAACGGTCAATATCTGATCACATGCAAGAGACAGTTAAT
TACATTCAATATATGCAAAGAAGGATCCAACAACTGTCTGATAAAAGAGATGAGTTGAGAAAACTCTCCGATGAAAATATGGCCTCCATTAGTATGGTGGAAACACTTAA
TTCCTCAAAAAGAGATTTGGTGGTGGTGAGGTCGAAAAATGAATTGGGGATTCAAATTATCTTAGACACTGGCATAAAACACAGATTTCCTATCTCCAACCTTCTTCCAG
TTTTAGTTGCCGAAGGATTGGAAAACATCACTTGCGCATCCAACAGACTGAATGAGAGGTTCATTCACATCATAGAATGCCAACCTATTGTAAATAATGATGGTTTTTAT
CAAAGCAAATCTAGACTTCAACATAAGTTAACGAATTTAGAATATTTTCCTATAGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAATTCAATGTTGAATCCCCCTTTCCTTTTGACTTAGGAGATGACTTATTTCCTTTGCCTTCTCTTCCATCGTCTTCCATCTCTCCATCTTCGGACAACAGTAACAG
TGCCTGCAAAACACAAAAAAATGGCCGCCGGAAAAAGCCAGCGCCCAACTCTCACAATAGTGAGAATGACGAACAAAAAAAGAAGTTAATACATAGAGATGTGGAACGAC
AAAGAAGACGAGAAATGTCTTTTCTTTACACCACACTTCGCTCACTTCTCCCTCTTGAATACCTCAAGGGAAAACGGTCAATATCTGATCACATGCAAGAGACAGTTAAT
TACATTCAATATATGCAAAGAAGGATCCAACAACTGTCTGATAAAAGAGATGAGTTGAGAAAACTCTCCGATGAAAATATGGCCTCCATTAGTATGGTGGAAACACTTAA
TTCCTCAAAAAGAGATTTGGTGGTGGTGAGGTCGAAAAATGAATTGGGGATTCAAATTATCTTAGACACTGGCATAAAACACAGATTTCCTATCTCCAACCTTCTTCCAG
TTTTAGTTGCCGAAGGATTGGAAAACATCACTTGCGCATCCAACAGACTGAATGAGAGGTTCATTCACATCATAGAATGCCAACCTATTGTAAATAATGATGGTTTTTAT
CAAAGCAAATCTAGACTTCAACATAAGTTAACGAATTTAGAATATTTTCCTATAGATTAA
Protein sequenceShow/hide protein sequence
MEFNVESPFPFDLGDDLFPLPSLPSSSISPSSDNSNSACKTQKNGRRKKPAPNSHNSENDEQKKKLIHRDVERQRRREMSFLYTTLRSLLPLEYLKGKRSISDHMQETVN
YIQYMQRRIQQLSDKRDELRKLSDENMASISMVETLNSSKRDLVVVRSKNELGIQIILDTGIKHRFPISNLLPVLVAEGLENITCASNRLNERFIHIIECQPIVNNDGFY
QSKSRLQHKLTNLEYFPID