; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc01G03480 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G03480
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionBHLH transcription factor
Genome locationClcChr01:3269355..3276863
RNA-Seq ExpressionClc01G03480
SyntenyClc01G03480
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:2000112 - regulation of cellular macromolecule biosynthetic process (biological process)
GO:0090575 - RNA polymerase II transcription factor complex (cellular component)
GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR015660 - Achaete-scute transcription factor-related
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042815.1 transcription factor bHLH120-like protein [Cucumis melo var. makuwa]1.5e-6168.02Show/hide
Query:  SFDFGDDLFTLPSLPPSS-ISPPLETN-NVLSQKKRNGRRKKAVPNTQNNENGEEMPDERKKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSI
        SFD G+DL  LPSLP SS ISPPL+ + N +SQK +NGRRKK +PNT N++ G+E  DE+KK+K+IHRDVERQRRQEMSSLYTTLRSLLP E LKGKRSI
Subjt:  SFDFGDDLFTLPSLPPSS-ISPPLETN-NVLSQKKRNGRRKKAVPNTQNNENGEEMPDERKKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSI

Query:  SDHMQEAVNYIQYMQRKIQQLSDKRDELRKLFDENMASVGITEMLNSSKRDSVVVRSKNELGIQDVLDSAIKHRLPISNILHVLLGEGFEILSCITN
        SDHMQE V+YIQ+MQR+IQQL DKRD+LR+L ++ M  +G TE LNSS+RDSVVVR+K+ +GIQ VLD+A KHRLP+S  +  L+ EG EIL+CI+N
Subjt:  SDHMQEAVNYIQYMQRKIQQLSDKRDELRKLFDENMASVGITEMLNSSKRDSVVVRSKNELGIQDVLDSAIKHRLPISNILHVLLGEGFEILSCITN

KAG6579462.1 Transcription factor basic helix-loop-helix 120, partial [Cucurbita argyrosperma subsp. sororia]3.8e-5460.85Show/hide
Query:  MEFN-----SFDFGDDLFTLPSL---------PPSSISPPLETNNVLSQKKRNGRRKKAVPNTQNNENGEEMPDERKKRKLIHRDVERQRRQEMSSLYTT
        MEFN     SFD GD+LF LPS+         P     PPL+     S++ +   R+   PN  N+EN    P+++K++K++HRDVERQRRQEMSSLY++
Subjt:  MEFN-----SFDFGDDLFTLPSL---------PPSSISPPLETNNVLSQKKRNGRRKKAVPNTQNNENGEEMPDERKKRKLIHRDVERQRRQEMSSLYTT

Query:  LRSLLPFECLKGKRSISDHMQEAVNYIQYMQRKIQQLSDKRDELRKLFDENMASVGITEMLNSSKRDSVVVRSKNELGIQDVLDSAIKHRLPISNILHVL
        LRSLLP E LKGKRSISDHM E V YIQYMQR+I+QLSDKRDEL+ L  ENMA VG+ E LNSS+RDSVVVRSKN LGIQ VLD+  +HRLP+SNIL VL
Subjt:  LRSLLPFECLKGKRSISDHMQEAVNYIQYMQRKIQQLSDKRDELRKLFDENMASVGITEMLNSSKRDSVVVRSKNELGIQDVLDSAIKHRLPISNILHVL

Query:  LGEGFEILSCIT
          EG EILSCIT
Subjt:  LGEGFEILSCIT

KAG6579464.1 Transcription factor basic helix-loop-helix 126, partial [Cucurbita argyrosperma subsp. sororia]1.7e-5463.55Show/hide
Query:  MEFN-----SFDFGDDLFTLPSLPPSSISPPLETNNVLSQKKRNGRRKKAVPNTQNNENGEEMPDERKKRKLIHRDVERQRRQEMSSLYTTLRSLLPFEC
        MEFN     SFDFGD+LF LP L       PLE  N+ S+K +  RR+K  PNT N+EN    P+E+K++K++HRDVERQRRQEMSSLY++LRSLLP E 
Subjt:  MEFN-----SFDFGDDLFTLPSLPPSSISPPLETNNVLSQKKRNGRRKKAVPNTQNNENGEEMPDERKKRKLIHRDVERQRRQEMSSLYTTLRSLLPFEC

Query:  LKGKRSISDHMQEAVNYIQYMQRKIQQLSDKRDELRKLFDENMASVGITEMLNSSKRDSVVVRSKNELGIQDVLDSAIKHRLPISNILHVLLGEGFEILS
        LKGK SISDHM E V YIQ +Q +I+QLSD+RDEL+ L +ENMA VG TE LNSS+RDSVVV SKNELGIQ VL +A +HR+P+SNIL VL+ EG EI+S
Subjt:  LKGKRSISDHMQEAVNYIQYMQRKIQQLSDKRDELRKLFDENMASVGITEMLNSSKRDSVVVRSKNELGIQDVLDSAIKHRLPISNILHVLLGEGFEILS

Query:  CIT
        CIT
Subjt:  CIT

NP_001295816.1 transcription factor bHLH118-like [Cucumis sativus]3.1e-5665.66Show/hide
Query:  SFDFGDDLFTLPSLPPSS-ISPPLET-NNVLSQKKRNGRRKKAVPNTQNNENGEEMPDERKKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSI
        SFD G+DL  LPSLP SS ISPPL+   N +SQK +NGRRKK +PNT N++ G+E  DE+KK+K+IHRDVERQRRQEMSSLYTTLRSLLP E LKGKRSI
Subjt:  SFDFGDDLFTLPSLPPSS-ISPPLET-NNVLSQKKRNGRRKKAVPNTQNNENGEEMPDERKKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSI

Query:  SDHMQEAVNYIQYMQRKIQQLSDKRDELRKLFDE-NMASVGITEMLNSSKRDSVVVRSKNELGIQDVLDSAIKHRLPISNILHVLLGEGFEILSCITN
        SDHMQE V+YIQ+MQR+IQQL DKR  LR+L  +  +A  G TE LNSS+R S VVR+K+ +GIQ VLD+A K RLP+S  +  L+ EG EIL+CI+N
Subjt:  SDHMQEAVNYIQYMQRKIQQLSDKRDELRKLFDE-NMASVGITEMLNSSKRDSVVVRSKNELGIQDVLDSAIKHRLPISNILHVLLGEGFEILSCITN

XP_038875626.1 transcription factor bHLH118-like [Benincasa hispida]8.8e-5965.53Show/hide
Query:  MEFN-----SFDFGDDLFTLPSLPPSS-ISPPLET-NNVLSQKKRNGRRKKAVPNTQNNENGEEMPDERKKRKLIHRDVERQRRQEMSSLYTTLRSLLPF
        M+FN     SFD GDDL  LPSLP SS IS P++   N +SQ ++NGRRKK +PNT  N+NG E P+E +K+K+IHRDVERQRRQEMSSLYTTLRSLLP 
Subjt:  MEFN-----SFDFGDDLFTLPSLPPSS-ISPPLET-NNVLSQKKRNGRRKKAVPNTQNNENGEEMPDERKKRKLIHRDVERQRRQEMSSLYTTLRSLLPF

Query:  ECLKGKRSISDHMQEAVNYIQYMQRKIQQLSDKRDELRKLFDENMASVGITEMLNSSKRDSVVVRSKNELGIQDVLDSAIKHRLPISNILHVLLGEGFEI
        E LKGKRSISDH+ E VNYIQ+MQ +IQQLSDKRDELRKL +   A+V   + LNSS+RDSVVVR K+ +GIQ V+D+A KHR P+SN L  L  EG EI
Subjt:  ECLKGKRSISDHMQEAVNYIQYMQRKIQQLSDKRDELRKLFDENMASVGITEMLNSSKRDSVVVRSKNELGIQDVLDSAIKHRLPISNILHVLLGEGFEI

Query:  LSCITN
        LSCI+N
Subjt:  LSCITN

TrEMBL top hitse value%identityAlignment
A0A097IYN6 BHLH transcription factor1.5e-5665.66Show/hide
Query:  SFDFGDDLFTLPSLPPSS-ISPPLET-NNVLSQKKRNGRRKKAVPNTQNNENGEEMPDERKKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSI
        SFD G+DL  LPSLP SS ISPPL+   N +SQK +NGRRKK +PNT N++ G+E  DE+KK+K+IHRDVERQRRQEMSSLYTTLRSLLP E LKGKRSI
Subjt:  SFDFGDDLFTLPSLPPSS-ISPPLET-NNVLSQKKRNGRRKKAVPNTQNNENGEEMPDERKKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSI

Query:  SDHMQEAVNYIQYMQRKIQQLSDKRDELRKLFDE-NMASVGITEMLNSSKRDSVVVRSKNELGIQDVLDSAIKHRLPISNILHVLLGEGFEILSCITN
        SDHMQE V+YIQ+MQR+IQQL DKR  LR+L  +  +A  G TE LNSS+R S VVR+K+ +GIQ VLD+A K RLP+S  +  L+ EG EIL+CI+N
Subjt:  SDHMQEAVNYIQYMQRKIQQLSDKRDELRKLFDE-NMASVGITEMLNSSKRDSVVVRSKNELGIQDVLDSAIKHRLPISNILHVLLGEGFEILSCITN

A0A5A7TLF7 Transcription factor bHLH36-like1.7e-4454.59Show/hide
Query:  SFDFGDDLFTLPSLP----------PSSISPPLETNNVLSQKKRNGRRKKAVPNTQNNENGEEMPDERKKRKLIHRDVERQRRQEMSSLYTTLRSLLPFE
        SFD GD+L  LPSL           PS +      +  +S + +NGRRKK   NT ++++ E   +E KK+K++HRDVERQRRQEMSSLY+TLRSLLP E
Subjt:  SFDFGDDLFTLPSLP----------PSSISPPLETNNVLSQKKRNGRRKKAVPNTQNNENGEEMPDERKKRKLIHRDVERQRRQEMSSLYTTLRSLLPFE

Query:  CLKGKRSISDHMQEAVNYIQYMQRKIQQLSDKRDELRKLFDENM-ASVGITEMLNSSKRDSVVVRSKN-ELGIQDVLDSAIKHRLPISNILHVLLGEGFE
         LKGKRSI DHM E V YI+YMQ KIQ+L DKRDEL+KL   N    +  TE L S+KRD VVVR+++   GIQ +LD+A +HRLP+SNIL  L  +G E
Subjt:  CLKGKRSISDHMQEAVNYIQYMQRKIQQLSDKRDELRKLFDENM-ASVGITEMLNSSKRDSVVVRSKN-ELGIQDVLDSAIKHRLPISNILHVLLGEGFE

Query:  ILSCITN
        ILSC +N
Subjt:  ILSCITN

A0A5A7TN30 Transcription factor bHLH120-like protein7.1e-6268.02Show/hide
Query:  SFDFGDDLFTLPSLPPSS-ISPPLETN-NVLSQKKRNGRRKKAVPNTQNNENGEEMPDERKKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSI
        SFD G+DL  LPSLP SS ISPPL+ + N +SQK +NGRRKK +PNT N++ G+E  DE+KK+K+IHRDVERQRRQEMSSLYTTLRSLLP E LKGKRSI
Subjt:  SFDFGDDLFTLPSLPPSS-ISPPLETN-NVLSQKKRNGRRKKAVPNTQNNENGEEMPDERKKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSI

Query:  SDHMQEAVNYIQYMQRKIQQLSDKRDELRKLFDENMASVGITEMLNSSKRDSVVVRSKNELGIQDVLDSAIKHRLPISNILHVLLGEGFEILSCITN
        SDHMQE V+YIQ+MQR+IQQL DKRD+LR+L ++ M  +G TE LNSS+RDSVVVR+K+ +GIQ VLD+A KHRLP+S  +  L+ EG EIL+CI+N
Subjt:  SDHMQEAVNYIQYMQRKIQQLSDKRDELRKLFDENMASVGITEMLNSSKRDSVVVRSKNELGIQDVLDSAIKHRLPISNILHVLLGEGFEILSCITN

A0A6J1E8G7 transcription factor bHLH118-like3.5e-5360.38Show/hide
Query:  MEFN-----SFDFGDDLFTLPSL---------PPSSISPPLETNNVLSQKKRNGRRKKAVPNTQNNENGEEMPDERKKRKLIHRDVERQRRQEMSSLYTT
        MEFN     SFD GD+LF LPS+         P      PLE +   S++ +   R+   PN  N+EN    P+++K++K++HRDVERQRRQEMSSLY++
Subjt:  MEFN-----SFDFGDDLFTLPSL---------PPSSISPPLETNNVLSQKKRNGRRKKAVPNTQNNENGEEMPDERKKRKLIHRDVERQRRQEMSSLYTT

Query:  LRSLLPFECLKGKRSISDHMQEAVNYIQYMQRKIQQLSDKRDELRKLFDENMASVGITEMLNSSKRDSVVVRSKNELGIQDVLDSAIKHRLPISNILHVL
        LRSLLP E LKGK SISDHM E V YIQYMQR+I+QLSDKRDEL+ L  ENMA VG+ E LNSS+RDSVVVRSKN LGIQ VLD+  +HRLP+SNIL VL
Subjt:  LRSLLPFECLKGKRSISDHMQEAVNYIQYMQRKIQQLSDKRDELRKLFDENMASVGITEMLNSSKRDSVVVRSKNELGIQDVLDSAIKHRLPISNILHVL

Query:  LGEGFEILSCIT
          EG EILSCIT
Subjt:  LGEGFEILSCIT

A0A6J1I182 transcription factor bHLH120-like2.3e-5261.08Show/hide
Query:  MEFN-----SFDFGDDLFTLPSLPPSSISPPLETNNVLSQKKRNGRRKKAVPNTQNNENGEEMPDERKKRKLIHRDVERQRRQEMSSLYTTLRSLLPFEC
        MEFN     SF+FGD+LF LP +       PLE  N+ S+K +   R++  PNT N+EN    P+E+K++K++HRDVERQRRQEMSSLY++LRSLLP E 
Subjt:  MEFN-----SFDFGDDLFTLPSLPPSSISPPLETNNVLSQKKRNGRRKKAVPNTQNNENGEEMPDERKKRKLIHRDVERQRRQEMSSLYTTLRSLLPFEC

Query:  LKGKRSISDHMQEAVNYIQYMQRKIQQLSDKRDELRKLFDENMASVGITEMLNSSKRDSVVVRSKNELGIQDVLDSAIKHRLPISNILHVLLGEGFEILS
        LKGKRSISDHM E V YIQ +Q +IQQLS++RDEL+ L  ENM  VG  E LNSS+RDSVVV S N LGIQ VLD+AI+HRLP+S+IL VL+ EG EI+S
Subjt:  LKGKRSISDHMQEAVNYIQYMQRKIQQLSDKRDELRKLFDENMASVGITEMLNSSKRDSVVVRSKNELGIQDVLDSAIKHRLPISNILHVLLGEGFEILS

Query:  CIT
        CIT
Subjt:  CIT

SwissProt top hitse value%identityAlignment
Q9FLI0 Transcription factor bHLH1202.1e-1837.34Show/hide
Query:  NTQNNENGEEMPDER----KKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSISDHMQEAVNYIQYMQRKIQQLSDKRDELRKLFDENMASVGI
        N +   +   MP ER    K++KL+HR++ERQRRQEM+ L+ +LRS LP + +KGKR++SDH+  AV++I+  Q +I+ LS +RDEL++   +  +  G 
Subjt:  NTQNNENGEEMPDER----KKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSISDHMQEAVNYIQYMQRKIQQLSDKRDELRKLFDENMASVGI

Query:  TEMLNSSKRDSVVVRSKNELGIQDVLDSAIKHRL---PISNILHVLLGEGFEILSCIT
             SS+ +   V  +  +   +V+ S++   L   P+S +L VL G+G E++S +T
Subjt:  TEMLNSSKRDSVVVRSKNELGIQDVLDSAIKHRL---PISNILHVLLGEGFEILSCIT

Q9FLI1 Transcription factor bHLH367.9e-1841.26Show/hide
Query:  KLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSISDHMQEAVNYIQYMQRKIQQLSDKRDELRKLFDENMASVGITEMLNSSKRDSVVVRSKNE---
        K++HR+ ERQRRQEM+SLY +LRSLLP   +KGKRS SD + EAVNYI+Y+QRKI++LS +RD+L  L   ++    +       K D  ++  KN    
Subjt:  KLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSISDHMQEAVNYIQYMQRKIQQLSDKRDELRKLFDENMASVGITEMLNSSKRDSVVVRSKNE---

Query:  ----LGIQDVLDSAIKHRLP-ISNILHVLLGEGFEILSCITNL
            +G++ +L S      P  S++L VL   G  +L+ I+++
Subjt:  ----LGIQDVLDSAIKHRLP-ISNILHVLLGEGFEILSCITNL

Q9LN95 Transcription factor bHLH553.1e-1431.22Show/hide
Query:  SFDFGDDLFTLPSLPPS---SISPPLETNNVLSQKKRNGRRKKAVPNTQNNENGEEMPDERKKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRS
        +F + +DL     + PS   S   P   N V+         ++    T       +  DE K ++  H+++ERQRRQE +SL+  LR LLP + +KGKRS
Subjt:  SFDFGDDLFTLPSLPPS---SISPPLETNNVLSQKKRNGRRKKAVPNTQNNENGEEMPDERKKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRS

Query:  ISDHMQEAVNYIQYMQRKIQQLSDKRDELRK--LFDENMASVGITEMLNSS-----KRDSVVVRSKNELGIQDVLDSAIKHRLPISNILHVLLGEG-FEI
         +DH+ EAVNYI+ +Q+KI+++S+KRD +++      +     I  + +S+       +  VV     +G++ V+    +H   +S++L +L  E  F I
Subjt:  ISDHMQEAVNYIQYMQRKIQQLSDKRDELRK--LFDENMASVGITEMLNSS-----KRDSVVVRSKNELGIQDVLDSAIKHRLPISNILHVLLGEG-FEI

Query:  LSCIT
        +SCI+
Subjt:  LSCIT

Q9LQ08 Transcription factor bHLH1258.7e-1729.7Show/hide
Query:  NGRRKKAVPNTQNNENGEEMPDERKKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSISDHMQEAVNYIQYMQRKIQQLSDKRDELRKLFDENM
        + +++     T       +  D+R+ +K+ HRD+ERQRRQE+SSL+  LR+LLPF+ ++GKRS SDH+ +AVNYI+ +Q KI++L++KR+ ++K+     
Subjt:  NGRRKKAVPNTQNNENGEEMPDERKKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSISDHMQEAVNYIQYMQRKIQQLSDKRDELRKLFDENM

Query:  ASVGITEMLNSSKRDS-----------------VVVRSKNELGIQDVLDSAI-KHRLPISNILHVLLGE-GFEILSCITNLFFRELSVASREECRWFHVV
         +    E   SS   S                  VV +   +G++ ++   + +++  +S++L +L  E  F ++SC+          ++R + R+ H +
Subjt:  ASVGITEMLNSSKRDS-----------------VVVRSKNELGIQDVLDSAI-KHRLPISNILHVLLGE-GFEILSCITNLFFRELSVASREECRWFHVV

Query:  VA
        V+
Subjt:  VA

Q9STJ6 Transcription factor bHLH1262.1e-1838.1Show/hide
Query:  EMPDERKKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSISDHMQEAVNYIQYMQRKIQQLSDKRDELRKLFDENMAS---VGITEMLNSSKRD
        E  D +KK+KL+HRD+ERQRRQEM++L+ TLR+ LP + +KGKR++SDH+  AVN+I+  + +I++LS +RDEL +   +   S    G T         
Subjt:  EMPDERKKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSISDHMQEAVNYIQYMQRKIQQLSDKRDELRKLFDENMAS---VGITEMLNSSKRD

Query:  SVVVRSKNELGIQDVL--DSAIKHRLPISNILHVLLGEGFEILSCIT
        + V+   +  G++ V+  +S+    LP+S +L  +  +G E++S  T
Subjt:  SVVVRSKNELGIQDVL--DSAIKHRLPISNILHVLLGEGFEILSCIT

Arabidopsis top hitse value%identityAlignment
AT1G12540.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein2.2e-1531.22Show/hide
Query:  SFDFGDDLFTLPSLPPS---SISPPLETNNVLSQKKRNGRRKKAVPNTQNNENGEEMPDERKKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRS
        +F + +DL     + PS   S   P   N V+         ++    T       +  DE K ++  H+++ERQRRQE +SL+  LR LLP + +KGKRS
Subjt:  SFDFGDDLFTLPSLPPS---SISPPLETNNVLSQKKRNGRRKKAVPNTQNNENGEEMPDERKKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRS

Query:  ISDHMQEAVNYIQYMQRKIQQLSDKRDELRK--LFDENMASVGITEMLNSS-----KRDSVVVRSKNELGIQDVLDSAIKHRLPISNILHVLLGEG-FEI
         +DH+ EAVNYI+ +Q+KI+++S+KRD +++      +     I  + +S+       +  VV     +G++ V+    +H   +S++L +L  E  F I
Subjt:  ISDHMQEAVNYIQYMQRKIQQLSDKRDELRK--LFDENMASVGITEMLNSS-----KRDSVVVRSKNELGIQDVLDSAIKHRLPISNILHVLLGEG-FEI

Query:  LSCIT
        +SCI+
Subjt:  LSCIT

AT1G62975.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein6.2e-1829.7Show/hide
Query:  NGRRKKAVPNTQNNENGEEMPDERKKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSISDHMQEAVNYIQYMQRKIQQLSDKRDELRKLFDENM
        + +++     T       +  D+R+ +K+ HRD+ERQRRQE+SSL+  LR+LLPF+ ++GKRS SDH+ +AVNYI+ +Q KI++L++KR+ ++K+     
Subjt:  NGRRKKAVPNTQNNENGEEMPDERKKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSISDHMQEAVNYIQYMQRKIQQLSDKRDELRKLFDENM

Query:  ASVGITEMLNSSKRDS-----------------VVVRSKNELGIQDVLDSAI-KHRLPISNILHVLLGE-GFEILSCITNLFFRELSVASREECRWFHVV
         +    E   SS   S                  VV +   +G++ ++   + +++  +S++L +L  E  F ++SC+          ++R + R+ H +
Subjt:  ASVGITEMLNSSKRDS-----------------VVVRSKNELGIQDVLDSAI-KHRLPISNILHVLLGE-GFEILSCITNLFFRELSVASREECRWFHVV

Query:  VA
        V+
Subjt:  VA

AT4G25410.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.5e-1938.1Show/hide
Query:  EMPDERKKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSISDHMQEAVNYIQYMQRKIQQLSDKRDELRKLFDENMAS---VGITEMLNSSKRD
        E  D +KK+KL+HRD+ERQRRQEM++L+ TLR+ LP + +KGKR++SDH+  AVN+I+  + +I++LS +RDEL +   +   S    G T         
Subjt:  EMPDERKKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSISDHMQEAVNYIQYMQRKIQQLSDKRDELRKLFDENMAS---VGITEMLNSSKRD

Query:  SVVVRSKNELGIQDVL--DSAIKHRLPISNILHVLLGEGFEILSCIT
        + V+   +  G++ V+  +S+    LP+S +L  +  +G E++S  T
Subjt:  SVVVRSKNELGIQDVL--DSAIKHRLPISNILHVLLGEGFEILSCIT

AT5G51780.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein5.6e-1941.26Show/hide
Query:  KLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSISDHMQEAVNYIQYMQRKIQQLSDKRDELRKLFDENMASVGITEMLNSSKRDSVVVRSKNE---
        K++HR+ ERQRRQEM+SLY +LRSLLP   +KGKRS SD + EAVNYI+Y+QRKI++LS +RD+L  L   ++    +       K D  ++  KN    
Subjt:  KLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSISDHMQEAVNYIQYMQRKIQQLSDKRDELRKLFDENMASVGITEMLNSSKRDSVVVRSKNE---

Query:  ----LGIQDVLDSAIKHRLP-ISNILHVLLGEGFEILSCITNL
            +G++ +L S      P  S++L VL   G  +L+ I+++
Subjt:  ----LGIQDVLDSAIKHRLP-ISNILHVLLGEGFEILSCITNL

AT5G51790.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.5e-1937.34Show/hide
Query:  NTQNNENGEEMPDER----KKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSISDHMQEAVNYIQYMQRKIQQLSDKRDELRKLFDENMASVGI
        N +   +   MP ER    K++KL+HR++ERQRRQEM+ L+ +LRS LP + +KGKR++SDH+  AV++I+  Q +I+ LS +RDEL++   +  +  G 
Subjt:  NTQNNENGEEMPDER----KKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSISDHMQEAVNYIQYMQRKIQQLSDKRDELRKLFDENMASVGI

Query:  TEMLNSSKRDSVVVRSKNELGIQDVLDSAIKHRL---PISNILHVLLGEGFEILSCIT
             SS+ +   V  +  +   +V+ S++   L   P+S +L VL G+G E++S +T
Subjt:  TEMLNSSKRDSVVVRSKNELGIQDVLDSAIKHRL---PISNILHVLLGEGFEILSCIT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTCAATTCATTTGATTTTGGAGATGACCTATTCACTCTGCCTTCTCTTCCACCGTCCTCTATCTCTCCGCCCTTGGAAACCAATAACGTCCTGTCCCAAAAGAA
AAGAAATGGCCGCCGGAAAAAGGCAGTACCCAACACTCAAAATAATGAAAATGGCGAAGAGATGCCGGACGAACGAAAAAAGAGGAAGTTAATACATAGAGATGTGGAGA
GGCAAAGAAGACAAGAAATGTCTTCTCTTTATACCACTCTTCGCTCACTTCTCCCGTTTGAATGTCTCAAGGGAAAACGGTCAATATCTGACCACATGCAGGAGGCAGTT
AATTACATTCAATATATGCAAAGAAAAATCCAACAACTATCTGATAAAAGAGATGAGTTGAGAAAACTCTTCGACGAAAATATGGCCTCCGTCGGTATAACGGAAATGCT
TAATTCCTCAAAAAGAGATTCGGTGGTGGTGAGGTCGAAAAATGAATTAGGAATTCAAGATGTTTTAGACTCTGCCATAAAACACAGACTTCCTATCTCCAACATTCTTC
ATGTTTTACTTGGCGAAGGATTCGAAATCCTCAGCTGCATAACCAACCTATTTTTCCGTGAACTCTCGGTTGCTTCACGCGAAGAGTGTCGCTGGTTTCACGTTGTTGTC
GCATTGAGTATCGCTATCAGTCTTCAGCTCTCGCTACCCGTCTCGCTCTTCCGCTCTCACTTTCTGCCGCGCCTCACGGTCCCCGCGCCTAAAGAGCACTGTCGCTCTCT
CGCTACCTCTCGCGCTCTCGCTCTCTCGCTCTCCCGCTCGTCTCAAGCGCCCCGCGTCCAGTGTCGCCGCCAGCCTTTAGACTCTCGCTCTCTCGCTGGGTTTCGCTGTC
TCGGCTCTCGTGCTCTCGCTCAAGTCTCGCTTCTCGCTCGGGAACCTTTTTCTCTCGGATTTTTGGCTCTCGGCAGCGGTTCTTTTCTCGTCCGGCCAGAACAGTACCTT
AAAATCGAGGAAAGCTACGAGTTGGATAGCGTTCGGTCATGGAATGGAATGAGTATGATTATGACTGTTTACGCTCTAGGAGTAGGGTTACCTCCCCTATATTGGTTGGG
TGTTCACGGAGGTTGTGTACCTTCGGGTCCACAGGAGGAGGTTGTGTTCCTTCGGGTTCACCAGAGGTTGTGCTCTTTCGAGTACATTAGAGGTTTGTGTTCCTTCGGGA
TCACCAGAGGTAAAAGTTTCCTTCGGGGCTCTAGAGGTAAGGGAAAGAACGTGACGGCGAATGACAAGAAGAATCCTTATGGGATCACGGGACTCGTAGTAGCTTCCGCT
TAG
mRNA sequenceShow/hide mRNA sequence
ATGGAATTCAATTCATTTGATTTTGGAGATGACCTATTCACTCTGCCTTCTCTTCCACCGTCCTCTATCTCTCCGCCCTTGGAAACCAATAACGTCCTGTCCCAAAAGAA
AAGAAATGGCCGCCGGAAAAAGGCAGTACCCAACACTCAAAATAATGAAAATGGCGAAGAGATGCCGGACGAACGAAAAAAGAGGAAGTTAATACATAGAGATGTGGAGA
GGCAAAGAAGACAAGAAATGTCTTCTCTTTATACCACTCTTCGCTCACTTCTCCCGTTTGAATGTCTCAAGGGAAAACGGTCAATATCTGACCACATGCAGGAGGCAGTT
AATTACATTCAATATATGCAAAGAAAAATCCAACAACTATCTGATAAAAGAGATGAGTTGAGAAAACTCTTCGACGAAAATATGGCCTCCGTCGGTATAACGGAAATGCT
TAATTCCTCAAAAAGAGATTCGGTGGTGGTGAGGTCGAAAAATGAATTAGGAATTCAAGATGTTTTAGACTCTGCCATAAAACACAGACTTCCTATCTCCAACATTCTTC
ATGTTTTACTTGGCGAAGGATTCGAAATCCTCAGCTGCATAACCAACCTATTTTTCCGTGAACTCTCGGTTGCTTCACGCGAAGAGTGTCGCTGGTTTCACGTTGTTGTC
GCATTGAGTATCGCTATCAGTCTTCAGCTCTCGCTACCCGTCTCGCTCTTCCGCTCTCACTTTCTGCCGCGCCTCACGGTCCCCGCGCCTAAAGAGCACTGTCGCTCTCT
CGCTACCTCTCGCGCTCTCGCTCTCTCGCTCTCCCGCTCGTCTCAAGCGCCCCGCGTCCAGTGTCGCCGCCAGCCTTTAGACTCTCGCTCTCTCGCTGGGTTTCGCTGTC
TCGGCTCTCGTGCTCTCGCTCAAGTCTCGCTTCTCGCTCGGGAACCTTTTTCTCTCGGATTTTTGGCTCTCGGCAGCGGTTCTTTTCTCGTCCGGCCAGAACAGTACCTT
AAAATCGAGGAAAGCTACGAGTTGGATAGCGTTCGGTCATGGAATGGAATGAGTATGATTATGACTGTTTACGCTCTAGGAGTAGGGTTACCTCCCCTATATTGGTTGGG
TGTTCACGGAGGTTGTGTACCTTCGGGTCCACAGGAGGAGGTTGTGTTCCTTCGGGTTCACCAGAGGTTGTGCTCTTTCGAGTACATTAGAGGTTTGTGTTCCTTCGGGA
TCACCAGAGGTAAAAGTTTCCTTCGGGGCTCTAGAGGTAAGGGAAAGAACGTGACGGCGAATGACAAGAAGAATCCTTATGGGATCACGGGACTCGTAGTAGCTTCCGCT
TAG
Protein sequenceShow/hide protein sequence
MEFNSFDFGDDLFTLPSLPPSSISPPLETNNVLSQKKRNGRRKKAVPNTQNNENGEEMPDERKKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSISDHMQEAV
NYIQYMQRKIQQLSDKRDELRKLFDENMASVGITEMLNSSKRDSVVVRSKNELGIQDVLDSAIKHRLPISNILHVLLGEGFEILSCITNLFFRELSVASREECRWFHVVV
ALSIAISLQLSLPVSLFRSHFLPRLTVPAPKEHCRSLATSRALALSLSRSSQAPRVQCRRQPLDSRSLAGFRCLGSRALAQVSLLAREPFSLGFLALGSGSFLVRPEQYL
KIEESYELDSVRSWNGMSMIMTVYALGVGLPPLYWLGVHGGCVPSGPQEEVVFLRVHQRLCSFEYIRGLCSFGITRGKSFLRGSRGKGKNVTANDKKNPYGITGLVVASA