; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc01G03490 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G03490
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptiontranscription factor bHLH36-like
Genome locationClcChr01:3309339..3311172
RNA-Seq ExpressionClc01G03490
SyntenyClc01G03490
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:2000112 - regulation of cellular macromolecule biosynthetic process (biological process)
GO:0090575 - RNA polymerase II transcription factor complex (cellular component)
GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR015660 - Achaete-scute transcription factor-related
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147594.1 transcription factor bHLH36 [Cucumis sativus]2.9e-9977.69Show/hide
Query:  MDFNNVESPFSF-DLGDELLPLPSLSCIDNTFVPQLPL----ENSKTVSRNLKNGRRKKPPPSTSDDKGDGDGSSNEHKKKKIMHRDVERQRRQEMSSLY
        MD NNVESPF F DLGDELLPLPSLSCIDN FVPQ P      N+ TVS  LKN RRKKP P+ + D  D + +SNEHKKKKIMHRDVERQRRQEMSSLY
Subjt:  MDFNNVESPFSF-DLGDELLPLPSLSCIDNTFVPQLPL----ENSKTVSRNLKNGRRKKPPPSTSDDKGDGDGSSNEHKKKKIMHRDVERQRRQEMSSLY

Query:  STLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELSDKREELKIL-SNNQNSDMVEMETLNSSKRDKVLVRAKNGSGGIQVVLDTATQYRLPLSNI
        STLRSLLPIEYLKGKRSICDHM ETVKYIRYMQSKIQEL DKR+ELK L SNNQN  MVE ETL S+KRDKV+VRA++GSGGIQV+LDT TQ+RL LSNI
Subjt:  STLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELSDKREELKIL-SNNQNSDMVEMETLNSSKRDKVLVRAKNGSGGIQVVLDTATQYRLPLSNI

Query:  LEALIEQGLEILSCNSNKINDRFLHTIESEP-VFTSAQCPTIDISDLQYKLTNLEYFPLD
        LEALI+QG EILSC+SNK+NDRFLHTIES+P VFT    P IDISDLQY L NLEY PLD
Subjt:  LEALIEQGLEILSCNSNKINDRFLHTIESEP-VFTSAQCPTIDISDLQYKLTNLEYFPLD

XP_008437182.1 PREDICTED: transcription factor bHLH36-like [Cucumis melo]1.0e-10480.38Show/hide
Query:  MDFNNVESPFSFDLGDELLPLPSLSCIDNTFVPQLPL------ENSKTVSRNLKNGRRKKPPPSTSDDKGDGDGSSNEHKKKKIMHRDVERQRRQEMSSL
        MD NNVESPFSFDLGDELLPLPSLSCIDN FVPQ P        NS TVS   KNGRRKKPP +TSDDK D + +SNEHKKKKIMHRDVERQRRQEMSSL
Subjt:  MDFNNVESPFSFDLGDELLPLPSLSCIDNTFVPQLPL------ENSKTVSRNLKNGRRKKPPPSTSDDKGDGDGSSNEHKKKKIMHRDVERQRRQEMSSL

Query:  YSTLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELSDKREELKIL-SNNQNSDMVEMETLNSSKRDKVLVRAKNGSGGIQVVLDTATQYRLPLSN
        YSTLRSLLPIEYLKGKRSICDHM ETVKYIRYMQSKIQEL DKR+ELK L SNNQN DMVE ETL S+KRDKV+VRA++GSGGIQV+LDTAT++RLPLSN
Subjt:  YSTLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELSDKREELKIL-SNNQNSDMVEMETLNSSKRDKVLVRAKNGSGGIQVVLDTATQYRLPLSN

Query:  ILEALIEQGLEILSCNSNKINDRFLHTIESEPVFTSAQCPTIDISDLQYKLTNLEYFPLD
        IL AL +QGLEILSC+SNK+NDRFLHTIES+PVFTS   P ID+S LQY LTNLEY PLD
Subjt:  ILEALIEQGLEILSCNSNKINDRFLHTIESEPVFTSAQCPTIDISDLQYKLTNLEYFPLD

XP_022958459.1 transcription factor bHLH118-like [Cucurbita moschata]1.6e-7664.57Show/hide
Query:  NNVESPFSFDLGDELLPLPSLSCIDNTFVPQL----PLENSKTVSRNLKNGRRKKPPPSTSDDKGDGDGSSNEHKKKKIMHRDVERQRRQEMSSLYSTLR
        +N+ SPFS+DLG+EL PLPSLSCID   VPQ     PL+N+K+ ++  KNGRRKKPP ++SDD   GD + NEHKKKKIMHRDVERQRRQ+M+SLY+TLR
Subjt:  NNVESPFSFDLGDELLPLPSLSCIDNTFVPQL----PLENSKTVSRNLKNGRRKKPPPSTSDDKGDGDGSSNEHKKKKIMHRDVERQRRQEMSSLYSTLR

Query:  SLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELSDKREELKILSNNQNSDMVEMETLNSSKRDKVLVRAKNGSGGIQVVLDTATQYRLPLSNILEALI
        SLLP EYLKGKRSICDHM E VKYIR+MQS+IQ L +KR+ELK +S ++N     +ETL+SSKRD VLVRA+N SGG+QVVL+TATQ+ LP+SNIL  L 
Subjt:  SLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELSDKREELKILSNNQNSDMVEMETLNSSKRDKVLVRAKNGSGGIQVVLDTATQYRLPLSNILEALI

Query:  EQGLEILSCNSNKINDRFLHTIESEPVFTSAQCPTIDISDLQYKLTNLEYFPLD
         +GLEILS  S K+ND F+HTIE + +  S   P+ID+S+LQ+KL NLEYF L+
Subjt:  EQGLEILSCNSNKINDRFLHTIESEPVFTSAQCPTIDISDLQYKLTNLEYFPLD

XP_022995893.1 transcription factor bHLH118-like [Cucurbita maxima]2.3e-7563.78Show/hide
Query:  NNVESPFSFDLGDELLPLPSLSCIDNTFVPQL----PLENSKTVSRNLKNGRRKKPPPSTSDDKGDGDGSSNEHKKKKIMHRDVERQRRQEMSSLYSTLR
        +N+ SPFS+DLG+EL PLPSLSCID   VPQ     PL+++K+ S+  KNGRRK PP ++SDD   GD + NEHKKKKIMHRDVERQRRQ+M+SLY+TLR
Subjt:  NNVESPFSFDLGDELLPLPSLSCIDNTFVPQL----PLENSKTVSRNLKNGRRKKPPPSTSDDKGDGDGSSNEHKKKKIMHRDVERQRRQEMSSLYSTLR

Query:  SLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELSDKREELKILSNNQNSDMVEMETLNSSKRDKVLVRAKNGSGGIQVVLDTATQYRLPLSNILEALI
        SLLP EYLKGKRSICDHM E VKYIR+MQS+IQ+LS+KR+ELK +S ++N     +ETL+SSKR+ VLVRA+N SG +QVVL+TATQ+ LP+SNIL  L 
Subjt:  SLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELSDKREELKILSNNQNSDMVEMETLNSSKRDKVLVRAKNGSGGIQVVLDTATQYRLPLSNILEALI

Query:  EQGLEILSCNSNKINDRFLHTIESEPVFTSAQCPTIDISDLQYKLTNLEYFPLD
         +GLEILS  S K+ND F+HTIE + +  S   P+ID+S+LQ+KL NLEYF L+
Subjt:  EQGLEILSCNSNKINDRFLHTIESEPVFTSAQCPTIDISDLQYKLTNLEYFPLD

XP_023522249.1 transcription factor bHLH118-like [Cucurbita pepo subsp. pepo]2.1e-7664.94Show/hide
Query:  NNVESPFSFDLGDELLPLPSLSCIDNTFVPQL----PLENSKTVSRNLKNGRRKKPPPSTSDDKGDGDGSSNEHKKKKIMHRDVERQRRQEMSSLYSTLR
        +NV SPFS+DLG+EL PLPSLSCID   VPQ     PL+N+K+ ++  KNGRRK PP ++SDD   GD + NEHKKKKIMHRDVERQRRQ+M+SLY+TLR
Subjt:  NNVESPFSFDLGDELLPLPSLSCIDNTFVPQL----PLENSKTVSRNLKNGRRKKPPPSTSDDKGDGDGSSNEHKKKKIMHRDVERQRRQEMSSLYSTLR

Query:  SLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELSDKREELKILSNNQNSDMVEMETLNSSKRDKVLVRAKNGSGGIQVVLDTATQYRLPLSNILEALI
        SLLP EYLKGKRSICDHM E VKYIR+MQS+IQ+LS+KR+ELK +S ++N     +ETL+SSKR+ VLVRA+N SGG+QVVL+TATQ+ LP+SNIL  L 
Subjt:  SLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELSDKREELKILSNNQNSDMVEMETLNSSKRDKVLVRAKNGSGGIQVVLDTATQYRLPLSNILEALI

Query:  EQGLEILSCNSNKINDRFLHTIESEPVFTSAQCPTIDISDLQYKLTNLEYF
         +GLEILS  S K+ND F+HTIE + +  S   P+ID+S+LQ+KL NLEYF
Subjt:  EQGLEILSCNSNKINDRFLHTIESEPVFTSAQCPTIDISDLQYKLTNLEYF

TrEMBL top hitse value%identityAlignment
A0A0A0KKN9 BHLH domain-containing protein1.4e-9977.69Show/hide
Query:  MDFNNVESPFSF-DLGDELLPLPSLSCIDNTFVPQLPL----ENSKTVSRNLKNGRRKKPPPSTSDDKGDGDGSSNEHKKKKIMHRDVERQRRQEMSSLY
        MD NNVESPF F DLGDELLPLPSLSCIDN FVPQ P      N+ TVS  LKN RRKKP P+ + D  D + +SNEHKKKKIMHRDVERQRRQEMSSLY
Subjt:  MDFNNVESPFSF-DLGDELLPLPSLSCIDNTFVPQLPL----ENSKTVSRNLKNGRRKKPPPSTSDDKGDGDGSSNEHKKKKIMHRDVERQRRQEMSSLY

Query:  STLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELSDKREELKIL-SNNQNSDMVEMETLNSSKRDKVLVRAKNGSGGIQVVLDTATQYRLPLSNI
        STLRSLLPIEYLKGKRSICDHM ETVKYIRYMQSKIQEL DKR+ELK L SNNQN  MVE ETL S+KRDKV+VRA++GSGGIQV+LDT TQ+RL LSNI
Subjt:  STLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELSDKREELKIL-SNNQNSDMVEMETLNSSKRDKVLVRAKNGSGGIQVVLDTATQYRLPLSNI

Query:  LEALIEQGLEILSCNSNKINDRFLHTIESEP-VFTSAQCPTIDISDLQYKLTNLEYFPLD
        LEALI+QG EILSC+SNK+NDRFLHTIES+P VFT    P IDISDLQY L NLEY PLD
Subjt:  LEALIEQGLEILSCNSNKINDRFLHTIESEP-VFTSAQCPTIDISDLQYKLTNLEYFPLD

A0A1S3ATY1 transcription factor bHLH36-like5.1e-10580.38Show/hide
Query:  MDFNNVESPFSFDLGDELLPLPSLSCIDNTFVPQLPL------ENSKTVSRNLKNGRRKKPPPSTSDDKGDGDGSSNEHKKKKIMHRDVERQRRQEMSSL
        MD NNVESPFSFDLGDELLPLPSLSCIDN FVPQ P        NS TVS   KNGRRKKPP +TSDDK D + +SNEHKKKKIMHRDVERQRRQEMSSL
Subjt:  MDFNNVESPFSFDLGDELLPLPSLSCIDNTFVPQLPL------ENSKTVSRNLKNGRRKKPPPSTSDDKGDGDGSSNEHKKKKIMHRDVERQRRQEMSSL

Query:  YSTLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELSDKREELKIL-SNNQNSDMVEMETLNSSKRDKVLVRAKNGSGGIQVVLDTATQYRLPLSN
        YSTLRSLLPIEYLKGKRSICDHM ETVKYIRYMQSKIQEL DKR+ELK L SNNQN DMVE ETL S+KRDKV+VRA++GSGGIQV+LDTAT++RLPLSN
Subjt:  YSTLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELSDKREELKIL-SNNQNSDMVEMETLNSSKRDKVLVRAKNGSGGIQVVLDTATQYRLPLSN

Query:  ILEALIEQGLEILSCNSNKINDRFLHTIESEPVFTSAQCPTIDISDLQYKLTNLEYFPLD
        IL AL +QGLEILSC+SNK+NDRFLHTIES+PVFTS   P ID+S LQY LTNLEY PLD
Subjt:  ILEALIEQGLEILSCNSNKINDRFLHTIESEPVFTSAQCPTIDISDLQYKLTNLEYFPLD

A0A5A7TLF7 Transcription factor bHLH36-like5.1e-10580.38Show/hide
Query:  MDFNNVESPFSFDLGDELLPLPSLSCIDNTFVPQLPL------ENSKTVSRNLKNGRRKKPPPSTSDDKGDGDGSSNEHKKKKIMHRDVERQRRQEMSSL
        MD NNVESPFSFDLGDELLPLPSLSCIDN FVPQ P        NS TVS   KNGRRKKPP +TSDDK D + +SNEHKKKKIMHRDVERQRRQEMSSL
Subjt:  MDFNNVESPFSFDLGDELLPLPSLSCIDNTFVPQLPL------ENSKTVSRNLKNGRRKKPPPSTSDDKGDGDGSSNEHKKKKIMHRDVERQRRQEMSSL

Query:  YSTLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELSDKREELKIL-SNNQNSDMVEMETLNSSKRDKVLVRAKNGSGGIQVVLDTATQYRLPLSN
        YSTLRSLLPIEYLKGKRSICDHM ETVKYIRYMQSKIQEL DKR+ELK L SNNQN DMVE ETL S+KRDKV+VRA++GSGGIQV+LDTAT++RLPLSN
Subjt:  YSTLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELSDKREELKIL-SNNQNSDMVEMETLNSSKRDKVLVRAKNGSGGIQVVLDTATQYRLPLSN

Query:  ILEALIEQGLEILSCNSNKINDRFLHTIESEPVFTSAQCPTIDISDLQYKLTNLEYFPLD
        IL AL +QGLEILSC+SNK+NDRFLHTIES+PVFTS   P ID+S LQY LTNLEY PLD
Subjt:  ILEALIEQGLEILSCNSNKINDRFLHTIESEPVFTSAQCPTIDISDLQYKLTNLEYFPLD

A0A6J1H558 transcription factor bHLH118-like7.6e-7764.57Show/hide
Query:  NNVESPFSFDLGDELLPLPSLSCIDNTFVPQL----PLENSKTVSRNLKNGRRKKPPPSTSDDKGDGDGSSNEHKKKKIMHRDVERQRRQEMSSLYSTLR
        +N+ SPFS+DLG+EL PLPSLSCID   VPQ     PL+N+K+ ++  KNGRRKKPP ++SDD   GD + NEHKKKKIMHRDVERQRRQ+M+SLY+TLR
Subjt:  NNVESPFSFDLGDELLPLPSLSCIDNTFVPQL----PLENSKTVSRNLKNGRRKKPPPSTSDDKGDGDGSSNEHKKKKIMHRDVERQRRQEMSSLYSTLR

Query:  SLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELSDKREELKILSNNQNSDMVEMETLNSSKRDKVLVRAKNGSGGIQVVLDTATQYRLPLSNILEALI
        SLLP EYLKGKRSICDHM E VKYIR+MQS+IQ L +KR+ELK +S ++N     +ETL+SSKRD VLVRA+N SGG+QVVL+TATQ+ LP+SNIL  L 
Subjt:  SLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELSDKREELKILSNNQNSDMVEMETLNSSKRDKVLVRAKNGSGGIQVVLDTATQYRLPLSNILEALI

Query:  EQGLEILSCNSNKINDRFLHTIESEPVFTSAQCPTIDISDLQYKLTNLEYFPLD
         +GLEILS  S K+ND F+HTIE + +  S   P+ID+S+LQ+KL NLEYF L+
Subjt:  EQGLEILSCNSNKINDRFLHTIESEPVFTSAQCPTIDISDLQYKLTNLEYFPLD

A0A6J1K9B6 transcription factor bHLH118-like1.1e-7563.78Show/hide
Query:  NNVESPFSFDLGDELLPLPSLSCIDNTFVPQL----PLENSKTVSRNLKNGRRKKPPPSTSDDKGDGDGSSNEHKKKKIMHRDVERQRRQEMSSLYSTLR
        +N+ SPFS+DLG+EL PLPSLSCID   VPQ     PL+++K+ S+  KNGRRK PP ++SDD   GD + NEHKKKKIMHRDVERQRRQ+M+SLY+TLR
Subjt:  NNVESPFSFDLGDELLPLPSLSCIDNTFVPQL----PLENSKTVSRNLKNGRRKKPPPSTSDDKGDGDGSSNEHKKKKIMHRDVERQRRQEMSSLYSTLR

Query:  SLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELSDKREELKILSNNQNSDMVEMETLNSSKRDKVLVRAKNGSGGIQVVLDTATQYRLPLSNILEALI
        SLLP EYLKGKRSICDHM E VKYIR+MQS+IQ+LS+KR+ELK +S ++N     +ETL+SSKR+ VLVRA+N SG +QVVL+TATQ+ LP+SNIL  L 
Subjt:  SLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELSDKREELKILSNNQNSDMVEMETLNSSKRDKVLVRAKNGSGGIQVVLDTATQYRLPLSNILEALI

Query:  EQGLEILSCNSNKINDRFLHTIESEPVFTSAQCPTIDISDLQYKLTNLEYFPLD
         +GLEILS  S K+ND F+HTIE + +  S   P+ID+S+LQ+KL NLEYF L+
Subjt:  EQGLEILSCNSNKINDRFLHTIESEPVFTSAQCPTIDISDLQYKLTNLEYFPLD

SwissProt top hitse value%identityAlignment
Q9FLI0 Transcription factor bHLH1201.1e-2135.47Show/hide
Query:  SRNLKNGRRKKPPPSTSDDKGDGDGSSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELSDKREELKI
        S N K  R +   P   D+           K+KK++HR++ERQRRQEM+ L+++LRS LP++Y+KGKR++ DH+   V +I+  Q++I++LS +R+ELK 
Subjt:  SRNLKNGRRKKPPPSTSDDKGDGDGSSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELSDKREELKI

Query:  LSNNQNSDMVEMETLNSSKRDKVLVRAKNGSGGIQVVLDTATQ--YRLPLSNILEALIEQGLEILSCNSNKINDRFLHTIESEPVFTSAQCPTIDISDLQ
           +  S         SS+ +   V  +    G +VV+ +        PLS +LE L  QGLE++S  + ++N+R ++TI+ E    S  C   D++ LQ
Subjt:  LSNNQNSDMVEMETLNSSKRDKVLVRAKNGSGGIQVVLDTATQ--YRLPLSNILEALIEQGLEILSCNSNKINDRFLHTIESEPVFTSAQCPTIDISDLQ

Query:  YKL
         KL
Subjt:  YKL

Q9FLI1 Transcription factor bHLH361.6e-2337.99Show/hide
Query:  KKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELSDKREELKILS-----NNQNSDMVEMETLNSSKRDKVLVRA
        +K+MHR+ ERQRRQEM+SLY++LRSLLP+ ++KGKRS  D + E V YI+Y+Q KI+ELS +R++L +LS      + N D  E   + S K   V+   
Subjt:  KKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELSDKREELKILS-----NNQNSDMVEMETLNSSKRDKVLVRA

Query:  KNGSGGIQVVLDTATQYRLP-LSNILEALIEQGLEILSCNSNKINDRFLHTIESEPVFTSAQCPTIDISDLQYKLTNLE
        +    G++++L +      P  S++L+ L E GL +L+  S+ ++DR ++TI++E    +     ID+++L+ +L  ++
Subjt:  KNGSGGIQVVLDTATQYRLP-LSNILEALIEQGLEILSCNSNKINDRFLHTIESEPVFTSAQCPTIDISDLQYKLTNLE

Q9LN95 Transcription factor bHLH553.5e-1835.52Show/hide
Query:  NGRRKKPPPSTSDDKGDGDGSSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELSDKREELK-ILSNN
        +GR+      T  +   GD   +E K K+  H+++ERQRRQE +SL+  LR LLP +Y+KGKRS  DH+ E V YI+ +Q KI+E+S+KR+ +K  +++ 
Subjt:  NGRRKKPPPSTSDDKGDGDGSSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELSDKREELK-ILSNN

Query:  QNSDMVEMETLNSSK-----RDKVLVRAKNGSGGIQVVLDTATQYRLPLSNILEALI-EQGLEILSCNSNKINDRFLHTIESE
         +     + +L SS         + V  +    G+++V+    ++   LS++L+ L  EQ   I+SC S +++  F+HTI SE
Subjt:  QNSDMVEMETLNSSK-----RDKVLVRAKNGSGGIQVVLDTATQYRLPLSNILEALI-EQGLEILSCNSNKINDRFLHTIESE

Q9STJ6 Transcription factor bHLH1262.2e-2537.07Show/hide
Query:  GRRKKPPPSTSDDKGDGDGSSNEH------KKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELSDKREELKI
        G +++ P S++ + G   GS   H      KKKK++HRD+ERQRRQEM++L++TLR+ LP++Y+KGKR++ DH+   V +I+  +++I+ELS +R+EL  
Subjt:  GRRKKPPPSTSDDKGDGDGSSNEH------KKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELSDKREELKI

Query:  LSNNQNSDMVEMETLNS--SKRDKVLVRAKNGSGGIQVVL--DTATQYRLPLSNILEALIEQGLEILSCNSNKINDRFLHTIESEPVFTSAQCPTIDISD
         +        +     S   K +   V  +    G++VV+  +++    LPLS +LE + E+GLE++S  + ++NDR +HTI+ E    S  C  ID+  
Subjt:  LSNNQNSDMVEMETLNS--SKRDKVLVRAKNGSGGIQVVL--DTATQYRLPLSNILEALIEQGLEILSCNSNKINDRFLHTIESEPVFTSAQCPTIDISD

Query:  LQYKL
        LQ KL
Subjt:  LQYKL

Q9STJ7 Transcription factor bHLH1181.1e-2137.06Show/hide
Query:  KKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELSDKREELKILSNNQNSDMVEMETLNSSKRDKVLVRAKNGSG
        +K++H+++E++RRQEM+SLY++LRSLLP+E+++GKRS  D ++  V YI Y+Q  I++++ KR++L +LS        E E    S  + V++R      
Subjt:  KKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELSDKREELKILSNNQNSDMVEMETLNSSKRDKVLVRAKNGSG

Query:  GIQVVLDTATQYRLPLSNILEALIEQGLEILSCNSNKINDRFLHTIESEPVFTSAQCPTIDISDLQYKLT
        GI++VL      + P S++L+ L E GL +L    + +NDR +HT+++E          ID++DL+  LT
Subjt:  GIQVVLDTATQYRLPLSNILEALIEQGLEILSCNSNKINDRFLHTIESEPVFTSAQCPTIDISDLQYKLT

Arabidopsis top hitse value%identityAlignment
AT1G12540.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein2.5e-1935.52Show/hide
Query:  NGRRKKPPPSTSDDKGDGDGSSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELSDKREELK-ILSNN
        +GR+      T  +   GD   +E K K+  H+++ERQRRQE +SL+  LR LLP +Y+KGKRS  DH+ E V YI+ +Q KI+E+S+KR+ +K  +++ 
Subjt:  NGRRKKPPPSTSDDKGDGDGSSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELSDKREELK-ILSNN

Query:  QNSDMVEMETLNSSK-----RDKVLVRAKNGSGGIQVVLDTATQYRLPLSNILEALI-EQGLEILSCNSNKINDRFLHTIESE
         +     + +L SS         + V  +    G+++V+    ++   LS++L+ L  EQ   I+SC S +++  F+HTI SE
Subjt:  QNSDMVEMETLNSSK-----RDKVLVRAKNGSGGIQVVLDTATQYRLPLSNILEALI-EQGLEILSCNSNKINDRFLHTIESE

AT4G25400.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein8.2e-2337.06Show/hide
Query:  KKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELSDKREELKILSNNQNSDMVEMETLNSSKRDKVLVRAKNGSG
        +K++H+++E++RRQEM+SLY++LRSLLP+E+++GKRS  D ++  V YI Y+Q  I++++ KR++L +LS        E E    S  + V++R      
Subjt:  KKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELSDKREELKILSNNQNSDMVEMETLNSSKRDKVLVRAKNGSG

Query:  GIQVVLDTATQYRLPLSNILEALIEQGLEILSCNSNKINDRFLHTIESEPVFTSAQCPTIDISDLQYKLT
        GI++VL      + P S++L+ L E GL +L    + +NDR +HT+++E          ID++DL+  LT
Subjt:  GIQVVLDTATQYRLPLSNILEALIEQGLEILSCNSNKINDRFLHTIESEPVFTSAQCPTIDISDLQYKLT

AT4G25410.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.6e-2637.07Show/hide
Query:  GRRKKPPPSTSDDKGDGDGSSNEH------KKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELSDKREELKI
        G +++ P S++ + G   GS   H      KKKK++HRD+ERQRRQEM++L++TLR+ LP++Y+KGKR++ DH+   V +I+  +++I+ELS +R+EL  
Subjt:  GRRKKPPPSTSDDKGDGDGSSNEH------KKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELSDKREELKI

Query:  LSNNQNSDMVEMETLNS--SKRDKVLVRAKNGSGGIQVVL--DTATQYRLPLSNILEALIEQGLEILSCNSNKINDRFLHTIESEPVFTSAQCPTIDISD
         +        +     S   K +   V  +    G++VV+  +++    LPLS +LE + E+GLE++S  + ++NDR +HTI+ E    S  C  ID+  
Subjt:  LSNNQNSDMVEMETLNS--SKRDKVLVRAKNGSGGIQVVL--DTATQYRLPLSNILEALIEQGLEILSCNSNKINDRFLHTIESEPVFTSAQCPTIDISD

Query:  LQYKL
        LQ KL
Subjt:  LQYKL

AT5G51780.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.1e-2437.99Show/hide
Query:  KKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELSDKREELKILS-----NNQNSDMVEMETLNSSKRDKVLVRA
        +K+MHR+ ERQRRQEM+SLY++LRSLLP+ ++KGKRS  D + E V YI+Y+Q KI+ELS +R++L +LS      + N D  E   + S K   V+   
Subjt:  KKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELSDKREELKILS-----NNQNSDMVEMETLNSSKRDKVLVRA

Query:  KNGSGGIQVVLDTATQYRLP-LSNILEALIEQGLEILSCNSNKINDRFLHTIESEPVFTSAQCPTIDISDLQYKLTNLE
        +    G++++L +      P  S++L+ L E GL +L+  S+ ++DR ++TI++E    +     ID+++L+ +L  ++
Subjt:  KNGSGGIQVVLDTATQYRLP-LSNILEALIEQGLEILSCNSNKINDRFLHTIESEPVFTSAQCPTIDISDLQYKLTNLE

AT5G51790.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein8.2e-2335.47Show/hide
Query:  SRNLKNGRRKKPPPSTSDDKGDGDGSSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELSDKREELKI
        S N K  R +   P   D+           K+KK++HR++ERQRRQEM+ L+++LRS LP++Y+KGKR++ DH+   V +I+  Q++I++LS +R+ELK 
Subjt:  SRNLKNGRRKKPPPSTSDDKGDGDGSSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICDHMQETVKYIRYMQSKIQELSDKREELKI

Query:  LSNNQNSDMVEMETLNSSKRDKVLVRAKNGSGGIQVVLDTATQ--YRLPLSNILEALIEQGLEILSCNSNKINDRFLHTIESEPVFTSAQCPTIDISDLQ
           +  S         SS+ +   V  +    G +VV+ +        PLS +LE L  QGLE++S  + ++N+R ++TI+ E    S  C   D++ LQ
Subjt:  LSNNQNSDMVEMETLNSSKRDKVLVRAKNGSGGIQVVLDTATQ--YRLPLSNILEALIEQGLEILSCNSNKINDRFLHTIESEPVFTSAQCPTIDISDLQ

Query:  YKL
         KL
Subjt:  YKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTCAACAATGTCGAATCCCCTTTTTCATTTGACCTTGGTGACGAACTATTACCTCTTCCTTCTCTTTCGTGCATAGATAATACTTTTGTTCCTCAGTTACCCTT
GGAGAACAGTAAAACTGTCTCTCGAAACCTCAAAAATGGCCGCCGGAAAAAGCCACCGCCCAGTACTTCCGACGATAAAGGCGATGGCGACGGCAGCTCCAATGAACACA
AAAAGAAGAAGATTATGCATAGAGATGTGGAGCGTCAAAGAAGACAAGAAATGTCCTCTCTTTACTCCACTCTTCGCTCACTTCTCCCTATTGAATATCTCAAGGGAAAA
CGATCAATATGTGACCACATGCAAGAGACCGTTAAGTACATTCGATATATGCAAAGCAAGATCCAAGAACTAAGTGATAAAAGAGAGGAGTTAAAAATACTATCCAACAA
CCAAAATTCAGACATGGTAGAAATGGAAACGTTAAATTCCTCAAAAAGAGACAAAGTTTTAGTGAGGGCAAAAAATGGATCAGGAGGAATTCAAGTTGTTTTAGACACTG
CCACCCAATACAGGCTCCCTCTTTCCAACATTCTTGAAGCTTTAATTGAACAAGGCTTGGAAATTCTTAGTTGTAACTCCAACAAAATAAATGACAGGTTCCTTCACACT
ATCGAATCTGAACCTGTCTTTACCTCAGCCCAATGTCCAACCATCGATATCTCCGACCTTCAATATAAGTTGACAAATTTGGAGTATTTTCCTTTGGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTTCAACAATGTCGAATCCCCTTTTTCATTTGACCTTGGTGACGAACTATTACCTCTTCCTTCTCTTTCGTGCATAGATAATACTTTTGTTCCTCAGTTACCCTT
GGAGAACAGTAAAACTGTCTCTCGAAACCTCAAAAATGGCCGCCGGAAAAAGCCACCGCCCAGTACTTCCGACGATAAAGGCGATGGCGACGGCAGCTCCAATGAACACA
AAAAGAAGAAGATTATGCATAGAGATGTGGAGCGTCAAAGAAGACAAGAAATGTCCTCTCTTTACTCCACTCTTCGCTCACTTCTCCCTATTGAATATCTCAAGGGAAAA
CGATCAATATGTGACCACATGCAAGAGACCGTTAAGTACATTCGATATATGCAAAGCAAGATCCAAGAACTAAGTGATAAAAGAGAGGAGTTAAAAATACTATCCAACAA
CCAAAATTCAGACATGGTAGAAATGGAAACGTTAAATTCCTCAAAAAGAGACAAAGTTTTAGTGAGGGCAAAAAATGGATCAGGAGGAATTCAAGTTGTTTTAGACACTG
CCACCCAATACAGGCTCCCTCTTTCCAACATTCTTGAAGCTTTAATTGAACAAGGCTTGGAAATTCTTAGTTGTAACTCCAACAAAATAAATGACAGGTTCCTTCACACT
ATCGAATCTGAACCTGTCTTTACCTCAGCCCAATGTCCAACCATCGATATCTCCGACCTTCAATATAAGTTGACAAATTTGGAGTATTTTCCTTTGGATTAA
Protein sequenceShow/hide protein sequence
MDFNNVESPFSFDLGDELLPLPSLSCIDNTFVPQLPLENSKTVSRNLKNGRRKKPPPSTSDDKGDGDGSSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGK
RSICDHMQETVKYIRYMQSKIQELSDKREELKILSNNQNSDMVEMETLNSSKRDKVLVRAKNGSGGIQVVLDTATQYRLPLSNILEALIEQGLEILSCNSNKINDRFLHT
IESEPVFTSAQCPTIDISDLQYKLTNLEYFPLD