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Clc01G03630 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G03630
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionprotein LITTLE ZIPPER 1-like
Genome locationClcChr01:3418787..3419948
RNA-Seq ExpressionClc01G03630
SyntenyClc01G03630
Gene Ontology termsNA
InterPro domainsIPR039312 - Protein LITTLE ZIPPER


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647881.1 hypothetical protein Csa_000025 [Cucumis sativus]5.0e-3992.78Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLASRRRCEEKLGKDIELKNLQLFLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK
        MC+SATQSVLFHTIQSSKNRRS KRS  QVLRL SRRRCEEKLGKDIELKNLQL+LENQTIIEENEKLREKANILHQENLAL+TEFQKKFPHLEQRK
Subjt:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLASRRRCEEKLGKDIELKNLQLFLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK
KAG6579456.1 Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. sororia]6.3e-3484.54Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLASRRRCEEKLGKDIELKNLQLFLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK
        MCI ATQS+LFH IQ+SKN+R  KRSKLQVLRL +RRRCEEKLGKDIELKNLQL+L+NQTII+EN+KLREKANILHQEN+ALMTEFQKKFPHL QRK
Subjt:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLASRRRCEEKLGKDIELKNLQLFLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK
KAG7036101.1 Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. argyrosperma]9.1e-3383.67Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLASRRRC-EEKLGKDIELKNLQLFLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK
        MCI+ATQ +LFH I +SKNRR LKRSKLQV RL+SRRR  EEK GKDIELKNLQL+LENQTIIEENEKLREKANILHQENLALMTEF KKFPH +QRK
Subjt:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLASRRRC-EEKLGKDIELKNLQLFLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK
XP_022922429.1 protein LITTLE ZIPPER 1-like [Cucurbita moschata]7.5e-3586.6Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLASRRRCEEKLGKDIELKNLQLFLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK
        MCISATQS+LFH IQ+SKNRR  KRSKLQVLRL +RRRCEEKLGKDIELKNLQL+L+NQTII+EN+KLREKANILHQEN+ALMTEFQKKFPHL QRK
Subjt:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLASRRRCEEKLGKDIELKNLQLFLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK
XP_023534553.1 protein LITTLE ZIPPER 2-like [Cucurbita pepo subsp. pepo]9.1e-3382.47Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLASRRRCEEKLGKDIELKNLQLFLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK
        MCI+ATQ +LFH I +SKNRR LKRSKLQV RL+ RR  EEK GKDIELKNLQL+LENQTIIEENEKLREKANILHQENLALMTEF KKFPH +QRK
Subjt:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLASRRRCEEKLGKDIELKNLQLFLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK
TrEMBL top hitse value%identityAlignment
A0A0A0KKF8 Uncharacterized protein1.7e-3791.75Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLASRRRCEEKLGKDIELKNLQLFLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK
        MC+SATQSVLFHTIQSSKNRRS KRS  QVLRL +RRRCEEKLGKDIELKNLQL+LENQTIIEENEKLREKANILHQENLAL+TEFQKKFPHLEQRK
Subjt:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLASRRRCEEKLGKDIELKNLQLFLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK
A0A5J4ZU38 Uncharacterized protein3.9e-2162.38Show/hide
Query:  MCISATQSVLF----HTIQSSKNR-RSLKRSKLQVLRLASR-RRCEEKLGKDIELKNLQLFLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLE
        MCIS T+ +       T+ SS+ + RS KRSK+QV RL  R RRCEEK+GKD++LKNL+L++EN +I+EENEKLR+KAN+LHQENLALM+EFQKKF HL+
Subjt:  MCISATQSVLF----HTIQSSKNR-RSLKRSKLQVLRLASR-RRCEEKLGKDIELKNLQLFLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLE

Query:  Q
        +
Subjt:  Q
A0A6J1DZF5 protein LITTLE ZIPPER 2-like isoform X23.2e-3182.29Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLASRRRC-EEKLGKDIELKNLQLFLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQ
        MCISAT+S  FH I +SKNRR LKRSKLQV RL SRRRC EEK+GKDIELKNLQL+LENQTIIEENEKLRE+ANILHQENLALMTE QKKF HL++
Subjt:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLASRRRC-EEKLGKDIELKNLQLFLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQ
A0A6J1E319 protein LITTLE ZIPPER 2-like isoform X16.0e-3080Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLASRRRCEEKLGKDIELKNLQLFLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQ
        MCISAT+S  FH I +SKNRR LKRSKLQV RL  RR  EEK+GKDIELKNLQL+LENQTIIEENEKLRE+ANILHQENLALMTE QKKF HL++
Subjt:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLASRRRCEEKLGKDIELKNLQLFLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQ
A0A6J1E3C5 protein LITTLE ZIPPER 1-like3.6e-3586.6Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLASRRRCEEKLGKDIELKNLQLFLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK
        MCISATQS+LFH IQ+SKNRR  KRSKLQVLRL +RRRCEEKLGKDIELKNLQL+L+NQTII+EN+KLREKANILHQEN+ALMTEFQKKFPHL QRK
Subjt:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLASRRRCEEKLGKDIELKNLQLFLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK
SwissProt top hitse value%identityAlignment
F4IG60 Protein LITTLE ZIPPER 19.9e-0640.22Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSL---KRSKLQVLRLASRRRCEEKLGKDIELKNLQLFLENQTIIEENEKLREKANILHQENLALMTEFQKK
        MC+S+++     T   +  R  L    +S +++ RL+ RRR   +  K +E+ NL+L++ENQ II ENEKL++KA +LHQEN  L +  Q K
Subjt:  MCISATQSVLFHTIQSSKNRRSL---KRSKLQVLRLASRRRCEEKLGKDIELKNLQLFLENQTIIEENEKLREKANILHQENLALMTEFQKK
Q9LZX5 Protein LITTLE ZIPPER 22.0e-0645.71Show/hide
Query:  RSLKRSKLQVLRLASRRRCEEKLGKDIELKNLQLFLENQTIIEENEKLREKANILHQENLALMTEFQKKF
        +S  ++ L++L L  RRR   K  K++E++NL+LF+ENQ+II ENE L++KA +LH EN AL      K+
Subjt:  RSLKRSKLQVLRLASRRRCEEKLGKDIELKNLQLFLENQTIIEENEKLREKANILHQENLALMTEFQKKF
Arabidopsis top hitse value%identityAlignment
AT2G45450.1 protein binding7.0e-0740.22Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSL---KRSKLQVLRLASRRRCEEKLGKDIELKNLQLFLENQTIIEENEKLREKANILHQENLALMTEFQKK
        MC+S+++     T   +  R  L    +S +++ RL+ RRR   +  K +E+ NL+L++ENQ II ENEKL++KA +LHQEN  L +  Q K
Subjt:  MCISATQSVLFHTIQSSKNRRSL---KRSKLQVLRLASRRRCEEKLGKDIELKNLQLFLENQTIIEENEKLREKANILHQENLALMTEFQKK
AT3G60890.1 protein binding1.4e-0745.71Show/hide
Query:  RSLKRSKLQVLRLASRRRCEEKLGKDIELKNLQLFLENQTIIEENEKLREKANILHQENLALMTEFQKKF
        +S  ++ L++L L  RRR   K  K++E++NL+LF+ENQ+II ENE L++KA +LH EN AL      K+
Subjt:  RSLKRSKLQVLRLASRRRCEEKLGKDIELKNLQLFLENQTIIEENEKLREKANILHQENLALMTEFQKKF
AT3G60890.2 protein binding5.7e-0947.14Show/hide
Query:  RSLKRSKLQVLRLASRRRCEEKLGKDIELKNLQLFLENQTIIEENEKLREKANILHQENLALMTEFQKKF
        +S  ++ L++L L SRRR   K  K++E++NL+LF+ENQ+II ENE L++KA +LH EN AL      K+
Subjt:  RSLKRSKLQVLRLASRRRCEEKLGKDIELKNLQLFLENQTIIEENEKLREKANILHQENLALMTEFQKKF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCATCAGTGCAACGCAGAGTGTTCTGTTTCATACAATTCAAAGTTCCAAGAACAGGAGAAGTTTAAAAAGATCCAAACTTCAAGTTCTGAGGCTTGCCAGCAGGAG
GAGATGTGAAGAGAAGCTGGGGAAGGATATTGAGCTGAAGAATCTGCAGCTATTTCTGGAGAATCAGACCATAATTGAAGAGAATGAGAAGCTAAGAGAGAAAGCCAATA
TCCTTCATCAAGAGAATTTGGCTTTAATGACTGAGTTTCAGAAAAAATTCCCACATTTGGAACAGAGAAAGTGA
mRNA sequenceShow/hide mRNA sequence
GTAAGGTCTTAGCCACAGGATAAAAAGAGTGCTTAATCAGAAGTCCACCAGCCATTATTATTATTAGTACAATTTGCTTTCTCTATCTCTCTTTTTTCTCTGTCTCGTGA
GTCTACACAGTCTATATAAGTATGAGTTTTAGTCCAACTGATTCCCCTGCAACTTTCATACAATATTCTACTAGAAAGAAAGGCAAAAGTTAAGAAGCTGCCATAGAAGA
ATAATGTGCATCAGTGCAACGCAGAGTGTTCTGTTTCATACAATTCAAAGTTCCAAGAACAGGAGAAGTTTAAAAAGATCCAAACTTCAAGTTCTGAGGCTTGCCAGCAG
GAGGAGATGTGAAGAGAAGCTGGGGAAGGATATTGAGCTGAAGAATCTGCAGCTATTTCTGGAGAATCAGACCATAATTGAAGAGAATGAGAAGCTAAGAGAGAAAGCCA
ATATCCTTCATCAAGAGAATTTGGCTTTAATGACTGAGTTTCAGAAAAAATTCCCACATTTGGAACAGAGAAAGTGATGGGAATCATCAGAGGGTGACATCGTTTATCTC
TCTCCCTCTCTCTCTAGGGAGGGTGAGAAGGTCTGAGTGATTTCTAAATGTATTGAACTCTTTATTCAATATATATGTGCCATTTATCTAGAGTTGACATAACTTGAAGA
ATAGAGTAATTTATATAGTAGTGAGAGGTTGGGAGTTGGAAATCTTTTTCAAGGCCAGTGGTTGTTGAACTTTGTGAAGCTTAAAAAGTAATCAGATCATATGCACACAA
ACTATGGGACCAAATATGATATAGGATCAATCATATAATTTCTTTTGTAGGTATTGAAGTTTGTTCATATAATGTTTTGTTGCAAGACAAAACTCAGAAAAGATCCTGCA
ATATGGTTAGGACTATTCATATGGAAGAATAACACTGTAGAAATTTGAACTTGTACGATTTATTATCTAGAGCTAATGAGGAGCAGGAGCCATTTCTAGTGCACAATATG
GATCACAAACAAAAAAAGAGGATTCCTAATAGTATCTTTTTTAGGTGAGAAGCATATGAATGAACCGAATCTACATCG
Protein sequenceShow/hide protein sequence
MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLASRRRCEEKLGKDIELKNLQLFLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK