; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc01G03710 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G03710
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionprotein cornichon homolog 4-like
Genome locationClcChr01:3532836..3534953
RNA-Seq ExpressionClc01G03710
SyntenyClc01G03710
Gene Ontology termsGO:0016192 - vesicle-mediated transport (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR003377 - Cornichon


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022922295.1 protein cornichon homolog 4-like [Cucurbita moschata]9.7e-3062.81Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLEVSRIVALEFHSTVLRTNLQWISFGISQTSVFEIGLLRI
        LMCLADLEFDYINPYDSSSRINKVV+PEFITQGVLCIFYLL+GHWIMSLFCVPYLYYN+RL   R   ++   T +   L W      +  +F++  L  
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLEVSRIVALEFHSTVLRTNLQWISFGISQTSVFEIGLLRI

Query:  LLNTRLVRCWLIYSALEDHDS
        L+   +   WLIYSALEDH+S
Subjt:  LLNTRLVRCWLIYSALEDHDS

XP_022957749.1 protein cornichon homolog 4-like [Cucurbita moschata]2.6e-3064.46Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLEVSRIVALEFHSTVLRTNLQWISFGISQTSVFEIGLLRI
        LMCLADLEFDYINPYDSSSRINKVV+PEFITQGVLCIFYLL+GHWIMS FCVPYLYYNLRL   R   ++   T +   L W         V+ I LL +
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLEVSRIVALEFHSTVLRTNLQWISFGISQTSVFEIGLLRI

Query:  LLNTRLVRCWLIYSALEDHDS
         +       WLIYSALEDHDS
Subjt:  LLNTRLVRCWLIYSALEDHDS

XP_022996131.1 protein cornichon homolog 4-like [Cucurbita maxima]4.4e-3064.46Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLEVSRIVALEFHSTVLRTNLQWISFGISQTSVFEIGLLRI
        LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLL+GHWIMS FC+PYLYYNLRL   R   ++   T +   L W         V+ I LL +
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLEVSRIVALEFHSTVLRTNLQWISFGISQTSVFEIGLLRI

Query:  LLNTRLVRCWLIYSALEDHDS
         +       WLIYSALEDHDS
Subjt:  LLNTRLVRCWLIYSALEDHDS

XP_023532889.1 protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo]2.0e-3065.29Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLEVSRIVALEFHSTVLRTNLQWISFGISQTSVFEIGLLRI
        LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLL+GHWIMS FCVPYLYYNLRL   R   ++   T +   L W         V+ I LL +
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLEVSRIVALEFHSTVLRTNLQWISFGISQTSVFEIGLLRI

Query:  LLNTRLVRCWLIYSALEDHDS
         +       WLIYSALEDHDS
Subjt:  LLNTRLVRCWLIYSALEDHDS

XP_038907022.1 protein cornichon homolog 4-like [Benincasa hispida]1.1e-3065.29Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLEVSRIVALEFHSTVLRTNLQWISFGISQTSVFEIGLLRI
        LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFC+PYLYYNLRL   R   ++   T +   L W      +  +F++  L  
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLEVSRIVALEFHSTVLRTNLQWISFGISQTSVFEIGLLRI

Query:  LLNTRLVRCWLIYSALEDHDS
        LL   +   WLIYSALEDH+S
Subjt:  LLNTRLVRCWLIYSALEDHDS

TrEMBL top hitse value%identityAlignment
A0A6J1DX47 protein cornichon homolog 46.2e-3064.17Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLEVSRIVALEFHSTVLRTNLQWISFGISQTSVFEIGLLRI
        LMCLADLEFDYINPYDSSSRINKVV+PEFITQGVLCIFYLL+GHWIMSLFC PYLYYNLRL   R   ++   T +   L W      +  +F++  L  
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLEVSRIVALEFHSTVLRTNLQWISFGISQTSVFEIGLLRI

Query:  LLNTRLVRCWLIYSALEDHD
        LL   +   WLIYSALEDHD
Subjt:  LLNTRLVRCWLIYSALEDHD

A0A6J1E8A9 protein cornichon homolog 4-like4.7e-3062.81Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLEVSRIVALEFHSTVLRTNLQWISFGISQTSVFEIGLLRI
        LMCLADLEFDYINPYDSSSRINKVV+PEFITQGVLCIFYLL+GHWIMSLFCVPYLYYN+RL   R   ++   T +   L W      +  +F++  L  
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLEVSRIVALEFHSTVLRTNLQWISFGISQTSVFEIGLLRI

Query:  LLNTRLVRCWLIYSALEDHDS
        L+   +   WLIYSALEDH+S
Subjt:  LLNTRLVRCWLIYSALEDHDS

A0A6J1H2W0 protein cornichon homolog 4-like1.2e-3064.46Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLEVSRIVALEFHSTVLRTNLQWISFGISQTSVFEIGLLRI
        LMCLADLEFDYINPYDSSSRINKVV+PEFITQGVLCIFYLL+GHWIMS FCVPYLYYNLRL   R   ++   T +   L W         V+ I LL +
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLEVSRIVALEFHSTVLRTNLQWISFGISQTSVFEIGLLRI

Query:  LLNTRLVRCWLIYSALEDHDS
         +       WLIYSALEDHDS
Subjt:  LLNTRLVRCWLIYSALEDHDS

A0A6J1I130 protein cornichon homolog 4-like1.4e-2961.98Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLEVSRIVALEFHSTVLRTNLQWISFGISQTSVFEIGLLRI
        LMCLADLEFDYINPYDSSSRINKVV+PEFITQGVLC FYLL+GHWIMSLFCVPYLYYN+RL   R   ++   T +   L W      +  +F++  L  
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLEVSRIVALEFHSTVLRTNLQWISFGISQTSVFEIGLLRI

Query:  LLNTRLVRCWLIYSALEDHDS
        L+   +   WLIYSALEDH+S
Subjt:  LLNTRLVRCWLIYSALEDHDS

A0A6J1K131 protein cornichon homolog 4-like2.1e-3064.46Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLEVSRIVALEFHSTVLRTNLQWISFGISQTSVFEIGLLRI
        LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLL+GHWIMS FC+PYLYYNLRL   R   ++   T +   L W         V+ I LL +
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLEVSRIVALEFHSTVLRTNLQWISFGISQTSVFEIGLLRI

Query:  LLNTRLVRCWLIYSALEDHDS
         +       WLIYSALEDHDS
Subjt:  LLNTRLVRCWLIYSALEDHDS

SwissProt top hitse value%identityAlignment
Q3EDD7 Probable protein cornichon homolog 26.1e-2754.17Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLEVSRIVALEFHSTVLRTNLQWISFGISQTSVFEIGLLRI
        L+CLADLEFDYINPYDS+SRIN VV+PEFI QGVLC+FYLL+GHW M+L C+PYLYYN  L   R   ++   T +   L W      +  +F+  L  I
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLEVSRIVALEFHSTVLRTNLQWISFGISQTSVFEIGLLRI

Query:  LLNTRLVRCWLIYSALEDHD
        +LN  L   W+IYSAL+D++
Subjt:  LLNTRLVRCWLIYSALEDHD

Q84W04 Protein cornichon homolog 48.0e-2745.58Show/hide
Query:  VWHKFAFSYTVLMIQALPIYEYLNWHILMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLEVSRIVALEFHS
        +W      + ++ +  + +Y+      L+CLADLEFDYINPYDS+SRIN VV+PEFI QGVLC+FYLL+GHW M+L C+PYLYYN  L   R   ++   
Subjt:  VWHKFAFSYTVLMIQALPIYEYLNWHILMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLEVSRIVALEFHS

Query:  TVLRTNLQWISFGISQTSVFEIGLLRILLNTRLVRCWLIYSALEDHD
        T +   L W      +  +F+  L  I+LN  L   W+IYSAL+D++
Subjt:  TVLRTNLQWISFGISQTSVFEIGLLRILLNTRLVRCWLIYSALEDHD

Q8GWT5 Protein cornichon homolog 31.6e-2243.54Show/hide
Query:  VWHKFAFSYTVLMIQALPIYEYLNWHILMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLEVSRIVALEFHS
        VW        ++ +  L +Y+      L+ LADLEFDYINPYDS+SRIN VV+PE I QG LC+FYL++GHW M+L CVPYLYYN  L   +   ++   
Subjt:  VWHKFAFSYTVLMIQALPIYEYLNWHILMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLEVSRIVALEFHS

Query:  TVLRTNLQWISFGISQTSVFEIGLLRILLNTRLVRCWLIYSALEDHD
        T +   L W      +  +F+  L  I+L   L   WLIYS L+D++
Subjt:  TVLRTNLQWISFGISQTSVFEIGLLRILLNTRLVRCWLIYSALEDHD

Q9C7D7 Protein cornichon homolog 12.3e-1334.68Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLEVSRIVALE----FHSTVLRTNLQWISFGISQTSVFEIG
        ++CL DLE DY+NP+++S+RIN++V+PEFI QG LC+ +LL+ HW+  L  VP   Y+  L   R   ++    F        L++   G     +F + 
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLEVSRIVALE----FHSTVLRTNLQWISFGISQTSVFEIG

Query:  LLRILLNTRLVRCWLIYSALEDHD
        + R+ L+        +YS  ED D
Subjt:  LLRILLNTRLVRCWLIYSALEDHD

Q9SZ74 Protein cornichon homolog 51.5e-2046.61Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLEVSRIVALEFHSTVLRTNLQWISFGISQTSVFEIGLLRI
        L CLADLEFD INPYD SSRIN++V+PEF  QG+LC++Y+L+GHW M++  +P+L+YN+RL + R    +   T L    +W      +  V++IG   I
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLEVSRIVALEFHSTVLRTNLQWISFGISQTSVFEIGLLRI

Query:  LLNTRLVRCWLIYSALED
         L+  +   WLI+SAL D
Subjt:  LLNTRLVRCWLIYSALED

Arabidopsis top hitse value%identityAlignment
AT1G12340.1 Cornichon family protein4.4e-2854.17Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLEVSRIVALEFHSTVLRTNLQWISFGISQTSVFEIGLLRI
        L+CLADLEFDYINPYDS+SRIN VV+PEFI QGVLC+FYLL+GHW M+L C+PYLYYN  L   R   ++   T +   L W      +  +F+  L  I
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLEVSRIVALEFHSTVLRTNLQWISFGISQTSVFEIGLLRI

Query:  LLNTRLVRCWLIYSALEDHD
        +LN  L   W+IYSAL+D++
Subjt:  LLNTRLVRCWLIYSALEDHD

AT1G12390.1 Cornichon family protein5.7e-2845.58Show/hide
Query:  VWHKFAFSYTVLMIQALPIYEYLNWHILMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLEVSRIVALEFHS
        +W      + ++ +  + +Y+      L+CLADLEFDYINPYDS+SRIN VV+PEFI QGVLC+FYLL+GHW M+L C+PYLYYN  L   R   ++   
Subjt:  VWHKFAFSYTVLMIQALPIYEYLNWHILMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLEVSRIVALEFHS

Query:  TVLRTNLQWISFGISQTSVFEIGLLRILLNTRLVRCWLIYSALEDHD
        T +   L W      +  +F+  L  I+LN  L   W+IYSAL+D++
Subjt:  TVLRTNLQWISFGISQTSVFEIGLLRILLNTRLVRCWLIYSALEDHD

AT1G62880.1 Cornichon family protein1.1e-2343.54Show/hide
Query:  VWHKFAFSYTVLMIQALPIYEYLNWHILMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLEVSRIVALEFHS
        VW        ++ +  L +Y+      L+ LADLEFDYINPYDS+SRIN VV+PE I QG LC+FYL++GHW M+L CVPYLYYN  L   +   ++   
Subjt:  VWHKFAFSYTVLMIQALPIYEYLNWHILMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLEVSRIVALEFHS

Query:  TVLRTNLQWISFGISQTSVFEIGLLRILLNTRLVRCWLIYSALEDHD
        T +   L W      +  +F+  L  I+L   L   WLIYS L+D++
Subjt:  TVLRTNLQWISFGISQTSVFEIGLLRILLNTRLVRCWLIYSALEDHD

AT3G12180.1 Cornichon family protein1.6e-1434.68Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLEVSRIVALE----FHSTVLRTNLQWISFGISQTSVFEIG
        ++CL DLE DY+NP+++S+RIN++V+PEFI QG LC+ +LL+ HW+  L  VP   Y+  L   R   ++    F        L++   G     +F + 
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLEVSRIVALE----FHSTVLRTNLQWISFGISQTSVFEIG

Query:  LLRILLNTRLVRCWLIYSALEDHD
        + R+ L+        +YS  ED D
Subjt:  LLRILLNTRLVRCWLIYSALEDHD

AT4G12090.1 Cornichon family protein1.0e-2146.61Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLEVSRIVALEFHSTVLRTNLQWISFGISQTSVFEIGLLRI
        L CLADLEFD INPYD SSRIN++V+PEF  QG+LC++Y+L+GHW M++  +P+L+YN+RL + R    +   T L    +W      +  V++IG   I
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLEVSRIVALEFHSTVLRTNLQWISFGISQTSVFEIGLLRI

Query:  LLNTRLVRCWLIYSALED
         L+  +   WLI+SAL D
Subjt:  LLNTRLVRCWLIYSALED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCGATGGCGATGTCGTGGCATTGAAGTTGATTTCACATCACACAAAGAAGCAGGGAGACGAGACACGGGCACACAAGTTTAGGGCATTACTATGGCTGATATCTAC
GTCTGGCTTCTCTCCTTCTTCTTTATCATTGCGCTTCTCATACTCGTCGTTTTCCAGGTTCTCTCTAAACCCTACAATTTCTAACCTCACCAGAGACATCCAACTGTTAC
GTCCTGTTTGGCACAAATTTGCTTTTAGCTATACTGTGTTAATGATTCAAGCACTTCCTATTTATGAATATTTGAATTGGCATATACTAATGTGCTTGGCTGATCTTGAG
TTTGATTATATCAACCCTTATGACTCCTCATCACGGATAAACAAAGTTGTTGTGCCTGAGTTCATCACCCAAGGAGTCTTGTGCATCTTCTATCTTTTGTCAGGGCATTG
GATTATGTCATTATTTTGTGTGCCCTACCTCTATTATAATTTAAGATTGGAGGTCTCACGGATAGTCGCTTTGGAGTTTCACTCTACAGTTCTCCGAACTAATTTACAGT
GGATATCATTTGGGATAAGCCAAACTAGTGTATTCGAGATTGGGTTGTTGCGCATATTGCTTAATACGCGACTTGTTCGTTGCTGGTTAATTTACAGTGCGTTGGAGGAT
CATGATTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCCGATGGCGATGTCGTGGCATTGAAGTTGATTTCACATCACACAAAGAAGCAGGGAGACGAGACACGGGCACACAAGTTTAGGGCATTACTATGGCTGATATCTAC
GTCTGGCTTCTCTCCTTCTTCTTTATCATTGCGCTTCTCATACTCGTCGTTTTCCAGGTTCTCTCTAAACCCTACAATTTCTAACCTCACCAGAGACATCCAACTGTTAC
GTCCTGTTTGGCACAAATTTGCTTTTAGCTATACTGTGTTAATGATTCAAGCACTTCCTATTTATGAATATTTGAATTGGCATATACTAATGTGCTTGGCTGATCTTGAG
TTTGATTATATCAACCCTTATGACTCCTCATCACGGATAAACAAAGTTGTTGTGCCTGAGTTCATCACCCAAGGAGTCTTGTGCATCTTCTATCTTTTGTCAGGGCATTG
GATTATGTCATTATTTTGTGTGCCCTACCTCTATTATAATTTAAGATTGGAGGTCTCACGGATAGTCGCTTTGGAGTTTCACTCTACAGTTCTCCGAACTAATTTACAGT
GGATATCATTTGGGATAAGCCAAACTAGTGTATTCGAGATTGGGTTGTTGCGCATATTGCTTAATACGCGACTTGTTCGTTGCTGGTTAATTTACAGTGCGTTGGAGGAT
CATGATTCTTGAATAGATTCTGCAAAGTGCAAATTGTTGTCTTGTAGGAGATAATGTCACTGTACGGCTCACTACAAAGCTTTGTGTACTTATCTTAGGGTATCTTCTTG
TGTTGTAATTTTGGACAAATAATTGCCTTGTGAGTAAGGTCTAAAGTTTTTGATTGTCACTAAATGCTGCCCCTGTTTTGCGGTGCTGTCCATAAACGAAAATATTAAAA
AACATAAATACGAGATTCTTGTTATATTTATAGAAAGCCTTCATACACGATGTAAGTGAATAGAGTTGTTTATTTATGGACCGACACTACAACAGATATTAATTTTCATA
ACCTT
Protein sequenceShow/hide protein sequence
MPDGDVVALKLISHHTKKQGDETRAHKFRALLWLISTSGFSPSSLSLRFSYSSFSRFSLNPTISNLTRDIQLLRPVWHKFAFSYTVLMIQALPIYEYLNWHILMCLADLE
FDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLEVSRIVALEFHSTVLRTNLQWISFGISQTSVFEIGLLRILLNTRLVRCWLIYSALED
HDS