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Clc01G04130 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G04130
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description14 kDa proline-rich protein DC2.15-like
Genome locationClcChr01:4015998..4016264
RNA-Seq ExpressionClc01G04130
SyntenyClc01G04130
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039696.1 14 kDa proline-rich protein DC2.15-like [Cucumis melo var. makuwa]9.2e-0855.56Show/hide
Query:  MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTPSPLPSTEEGKRCPRDTLKFRICSKLLDARTDVTS-DKRP
        MASK T TSLAFL   I+ S S+FVS     CY  SN  PTPS   +++ GK+CP+DTLKF ICS+LL  +TDV + +KRP
Subjt:  MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTPSPLPSTEEGKRCPRDTLKFRICSKLLDARTDVTS-DKRP

XP_022154816.1 14 kDa proline-rich protein DC2.15-like [Momordica charantia]9.2e-0852.5Show/hide
Query:  MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTPSPLPSTEEGKRCPRDTLKFRICSKLLDARTDVTSDKRP
        MASKA + SLAFLL+L L  L S +++C +DCY PS+  PTPSP    E+GK+CP++TLK  +C+KLL    DVT    P
Subjt:  MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTPSPLPSTEEGKRCPRDTLKFRICSKLLDARTDVTSDKRP

XP_022154817.1 14 kDa proline-rich protein DC2.15-like [Momordica charantia]4.6e-0752.5Show/hide
Query:  MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTPSPLPSTEEGKRCPRDTLKFRICSKLLDARTDVTSDKRP
        MASKAT  SLAFLL+L L  L S V++C +DCY PS+  PTPSP    E+GK+CP++TLK  +C+KLL    +V+    P
Subjt:  MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTPSPLPSTEEGKRCPRDTLKFRICSKLLDARTDVTSDKRP

XP_022969913.1 14 kDa proline-rich protein DC2.15-like [Cucurbita maxima]4.6e-0754.76Show/hide
Query:  MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTPS----PLPSTEEGKRCPRDTLKFRICSKLLDARTDVTSDKRP
        MASKAT  SLAFLL+L L    S VS+C  DCY+PS   P P     P PS+  GK CPRDTLK  +C+KLL    DVT  K P
Subjt:  MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTPS----PLPSTEEGKRCPRDTLKFRICSKLLDARTDVTSDKRP

XP_038876273.1 14 kDa proline-rich protein DC2.15-like [Benincasa hispida]2.3e-1973.75Show/hide
Query:  MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTPSPLPSTEEGKRCPRDTLKFRICSKLLDARTDVTSDKRP
        MASKA+V S A LL L L SL S VSSC  DCY PSN TPTPSPLPS+EEGKRCP+DTLKF IC+KLL  RTDV  DKRP
Subjt:  MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTPSPLPSTEEGKRCPRDTLKFRICSKLLDARTDVTSDKRP

TrEMBL top hitse value%identityAlignment
A0A5A7TCB2 14 kDa proline-rich protein DC2.15-like4.5e-0855.56Show/hide
Query:  MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTPSPLPSTEEGKRCPRDTLKFRICSKLLDARTDVTS-DKRP
        MASK T TSLAFL   I+ S S+FVS     CY  SN  PTPS   +++ GK+CP+DTLKF ICS+LL  +TDV + +KRP
Subjt:  MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTPSPLPSTEEGKRCPRDTLKFRICSKLLDARTDVTS-DKRP

A0A6J1DMQ5 14 kDa proline-rich protein DC2.15-like2.2e-0752.5Show/hide
Query:  MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTPSPLPSTEEGKRCPRDTLKFRICSKLLDARTDVTSDKRP
        MASKAT  SLAFLL+L L  L S V++C +DCY PS+  PTPSP    E+GK+CP++TLK  +C+KLL    +V+    P
Subjt:  MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTPSPLPSTEEGKRCPRDTLKFRICSKLLDARTDVTSDKRP

A0A6J1DPV0 14 kDa proline-rich protein DC2.15-like4.5e-0852.5Show/hide
Query:  MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTPSPLPSTEEGKRCPRDTLKFRICSKLLDARTDVTSDKRP
        MASKA + SLAFLL+L L  L S +++C +DCY PS+  PTPSP    E+GK+CP++TLK  +C+KLL    DVT    P
Subjt:  MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTPSPLPSTEEGKRCPRDTLKFRICSKLLDARTDVTSDKRP

A0A6J1I2B7 14 kDa proline-rich protein DC2.15-like2.2e-0754.76Show/hide
Query:  MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTPS----PLPSTEEGKRCPRDTLKFRICSKLLDARTDVTSDKRP
        MASKAT  SLAFLL+L L    S VS+C  DCY+PS   P P     P PS+  GK CPRDTLK  +C+KLL    DVT  K P
Subjt:  MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTPS----PLPSTEEGKRCPRDTLKFRICSKLLDARTDVTSDKRP

A0A6J1I2C7 14 kDa proline-rich protein DC2.15-like2.9e-0754.76Show/hide
Query:  MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTPS----PLPSTEEGKRCPRDTLKFRICSKLLDARTDVTSDKRP
        MASKAT  SLAFLL+L L    S VS+C  DCY+PS   P P     P PS+  GK CPRDTLK  +C+KLL    DVT  K P
Subjt:  MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTPS----PLPSTEEGKRCPRDTLKFRICSKLLDARTDVTSDKRP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G12090.1 extensin-like protein2.3e-0438.1Show/hide
Query:  MASKATVTSLAFLLALILFSLSSFVSSCI---DDCYIPSNATPTPSPLPSTEEG-KRCPRDTLKFRICSKLLDARTDVTSDKRP
        MAS +    LA  L L+ F+  S   SC      C  P    PTP P PS   G  +CP+DTLK  +C+ +L+   D+T  K P
Subjt:  MASKATVTSLAFLLALILFSLSSFVSSCI---DDCYIPSNATPTPSPLPSTEEG-KRCPRDTLKFRICSKLLDARTDVTSDKRP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCAAAAGCTACTGTCACCTCTCTCGCATTCCTCCTCGCTCTCATTCTCTTCTCATTATCCTCCTTCGTTTCCTCTTGCATCGACGACTGCTACATTCCGTCCAA
TGCTACACCTACACCTTCACCTTTACCTTCTACCGAGGAGGGAAAAAGATGCCCAAGAGACACTCTTAAATTCCGTATTTGCTCGAAATTGCTCGACGCTCGCACCGACG
TTACCAGTGACAAGCGACCGGGGCACTCTAATGGAAGGGCTCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCAAAAGCTACTGTCACCTCTCTCGCATTCCTCCTCGCTCTCATTCTCTTCTCATTATCCTCCTTCGTTTCCTCTTGCATCGACGACTGCTACATTCCGTCCAA
TGCTACACCTACACCTTCACCTTTACCTTCTACCGAGGAGGGAAAAAGATGCCCAAGAGACACTCTTAAATTCCGTATTTGCTCGAAATTGCTCGACGCTCGCACCGACG
TTACCAGTGACAAGCGACCGGGGCACTCTAATGGAAGGGCTCATTGA
Protein sequenceShow/hide protein sequence
MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTPSPLPSTEEGKRCPRDTLKFRICSKLLDARTDVTSDKRPGHSNGRAH