CuGenDBv2

Gene ID	Clc01G04320
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Pentatricopeptide repeat-containing protein
Genome location	ClcChr01:4140641..4149579
RNA-Seq Expression	Clc01G04320
Synteny	Clc01G04320
Gene Ontology terms	GO:0003723 - RNA binding (molecular function) GO:0005515 - protein binding (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR000504 - RNA recognition motif domain IPR002885 - Pentatricopeptide repeat IPR011990 - Tetratricopeptide-like helical domain superfamily IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily IPR032867 - DYW domain IPR035979 - RNA-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004152881.1 pentatricopeptide repeat-containing protein At3g56550 isoform X1 [Cucumis sativus]

0.0e+00

90.16

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Query:  MSKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLFHQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASF
        MS EKAI+ LLQGCN+L +LRKIHAHVIVSGL  HV I NKLLNFCAISVSGSLAYAQLLFHQM CPQTEAWNSIIRGFAQSSSPI+AIVFYN+M+  SF
Subjt:  MSKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLFHQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASF

Query:  SSPDTFTFSFVLKACERIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQQGLHLESLETYNQMRSE
        S PDTFTFSFVLKACERIKAERKCKEVHGSVIRCGYD DVIVCTNLVKCYS MGSVC A+QVFD+MPARDLVAWNAMISCFSQQGLH E+L+TYNQMRSE
Subjt:  SSPDTFTFSFVLKACERIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQQGLHLESLETYNQMRSE

Query:  NVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE
        NVD+DGFTLVGLISSCAHLGALNIGVQMHRFARE GL QSLYVGNALIDMYAKCGSLDQAILIFDRMQ+KDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE
Subjt:  NVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE

Query:  ARMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALEIVSNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSL
        AR+QPN +TFLGLLCGCSHQGLVQEGVKYF+LMSS+FRL+PEVKHYGCLVDLYGRAGKL+KALEIVSNSS ND VLWRILLGSCKIHKNVTIGEIAMN L
Subjt:  ARMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALEIVSNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSL

Query:  CELGATNAGDCILLATIYAGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGDESISSLDVLST
         ELGAT+AGDCILLATIYAG+ D AGVARMRKMIK QG KTTPGWSWIEI +QVHKFVVDDKSHRYS+EVYEKLREVIHQAS FGYVGDESISSLD+LST
Subjt:  CELGATNAGDCILLATIYAGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGDESISSLDVLST

Query:  TETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW
         ETLKTSCTYHSEKLAIAFGLAR +DGTQIRIVKNLRVCRDCHSFIKAVS AFNREIIVRDRVRFHHF GG+CSCNDYW
Subjt:  TETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW

XP_016899519.1 PREDICTED: pentatricopeptide repeat-containing protein At3g56550 [Cucumis melo]

7.8e-308

90.33

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Query:  MSKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLFHQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASF
        MSKEKAI+TLLQGCN+L +LRKIHAHVIVSGL  HVAI NKLLNFCAISVSGSLAYAQLLFHQ   PQTEAWNSIIRGFAQSSSPI+AIVFYN+M+  SF
Subjt:  MSKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLFHQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASF

Query:  SSPDTFTFSFVLKACERIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQQGLHLESLETYNQMRSE
        S  DTFTFSFVLKACERIKAERKCKEVHG+VIRCGYD DVIVCTNLVKCYS MGSV  A+QVFD+MPARDLVAWNAMISCFSQQGLH E+L+TYNQMRSE
Subjt:  SSPDTFTFSFVLKACERIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQQGLHLESLETYNQMRSE

Query:  NVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE
        NVD+DGFTLVGLISSCAHLGALNIGVQMHRFARE GL QSLYVGNALIDMYAKCGSLDQAILIFDRMQ+KDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE
Subjt:  NVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE

Query:  ARMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALEIVSNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSL
        AR+QPNSITFLGLLCGCSHQGLVQEGVKYF+LMSS+FRLRPEVKHYGCLVDLYGRAGKLEKALEIVSNSS ND VLWR LLGSCKIHKNVTIGEIAMN L
Subjt:  ARMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALEIVSNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSL

Query:  CELGATNAGDCILLATIYAGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGDESISSLDVLST
         ELGAT+AGDCILLATIYAG+ND AGV+RMRKMIK QGIKTTPGWSWIEI +QVHKFVVDDKS+RYSIEVYEKLREVI+QAS FGYVGDES+SSLDVLST
Subjt:  CELGATNAGDCILLATIYAGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGDESISSLDVLST

Query:  TETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW
         ETLKTSCTYHSEKLAIAFGLAR +DGTQIRIVKNLRVCRDCHSFIKAVS AFNREIIVRDRVRFHHF GG+CSCNDYW
Subjt:  TETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW

XP_022149932.1 pentatricopeptide repeat-containing protein At3g56550 [Momordica charantia]

3.2e-301

86.18

Show/hide

Query:  MSKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLFHQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASF
        MS EKAI+TLLQGCN+LNKLRKIHAHVI+SGLR H AIGNKLLNFCAISVSGSL YA+LLF  M CPQTEAWNSIIRGFAQS+SPIEA+V+YN+M+ AS 
Subjt:  MSKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLFHQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASF

Query:  SSPDTFTFSFVLKACERIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQQGLHLESLETYNQMRSE
        S PDTFTFSFVLKACER+KAERKC+EVHGSVIR GYDGDVI+CTNL+KCY+ MG +C AQQVFD+MP RDLVAWNAMISC+SQQGLH E+LETYNQMRS 
Subjt:  SSPDTFTFSFVLKACERIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQQGLHLESLETYNQMRSE

Query:  NVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE
        NVDVDGFTLVGL+SSCAHLGALNIGVQMHRFAREKGLV+SLYVGNALIDMYAKCGSLDQAILIFDRMQ+KD+FTWNSMIVGYGVHGRG+EAI+CFQQMLE
Subjt:  NVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE

Query:  ARMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALEIVSNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSL
        AR+QP+S+TFLGLLCGCSHQGLVQEGVK+F+LMSS+FRLRPEVKHYGCLVDLYGRAGKLEKALEI+ NSSQNDPVLWRILLGSCKIHKNV IGEIAMN+L
Subjt:  ARMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALEIVSNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSL

Query:  CELGATNAGDCILLATIYAGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGDESISSLDVLST
         +LGATNAGDCILLATIYAG  +T+GV RMRKMI+ QGIKTTPGWSWIEI +QVHKFVVDDKSHRY IEVYEKL+EVIHQASLFGY+GD   S+ DV ST
Subjt:  CELGATNAGDCILLATIYAGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGDESISSLDVLST

Query:  TETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW
        +E L+TSC+YHSEKLAIAFGLAR +DGTQIRIVKNLRVCRDCHSF+KAVS AFNREIIVRDRVRFHHF GGQCSCNDYW
Subjt:  TETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW

XP_023537237.1 pentatricopeptide repeat-containing protein At3g56550 [Cucurbita pepo subsp. pepo]

1.2e-300

87.39

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Query:  MSKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLFHQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASF
        MSKEKAIITLLQGCN+LNKLRKIHAHV+VSGLR HVAI NKLLNFCAISVSGSLAYAQLLFHQM C QTEAWNSIIRGFAQSSSPI+A+V+YN+M+ ASF
Subjt:  MSKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLFHQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASF

Query:  SSPDTFTFSFVLKACERIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQQGLHLESLETYNQMRSE
        SSPDTFTFSFVLKACER+KAERKCKE+HG++IRCGYDGDVI+CTNLVKCY+ MGSVC AQQVFDEMP RDLVAWNAMISCFSQQGLH E+L+ YNQMRSE
Subjt:  SSPDTFTFSFVLKACERIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQQGLHLESLETYNQMRSE

Query:  NVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE
        NVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLV+SLYVGNALIDMYAKCGSLDQAI IFDRM +KDIFTWNSMIVGYGVHGRG+EAI+CF++MLE
Subjt:  NVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE

Query:  ARMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALEIVSNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSL
        ARMQPNSITFLGLLCGCSHQGLVQEGVKYF+LMSS+FRLRPEVKHYGCLVDLYGRAGKLEKALE + NSS NDPVLWRILLGSCKIHKNV +GEIAMN+L
Subjt:  ARMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALEIVSNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSL

Query:  CELGATNAGDCILLATIYAGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGDESISSLDVLST
         ELGATNAGDCILLATIYAG NDTAGVA MRK IK QGIKT+PGWSWIEI +QVHKFVVDDKSHR SIEVYEKLREV+HQASLFGYV D           
Subjt:  CELGATNAGDCILLATIYAGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGDESISSLDVLST

Query:  TETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW
         ETLKTS TYHSEKLAIAFGLAR +DGT IRIVKNLRVCRDCHSF+KAVS AF+REIIVRDRVRFHHF GGQCSCNDYW
Subjt:  TETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW

XP_038890323.1 pentatricopeptide repeat-containing protein At3g56550 [Benincasa hispida]

0.0e+00

92.75

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Query:  MSKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLFHQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASF
        MSKEKAI+TLLQGCN+LN+LRKIHAHVIVSGLR HVAIGNKLLNFCAISVSGSLAYAQLLFHQM CPQTEAWNSIIRGFAQSSSPI+AI+FYN+M+ ASF
Subjt:  MSKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLFHQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASF

Query:  SSPDTFTFSFVLKACERIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQQGLHLESLETYNQMRSE
        SSPDTFTFSFVLKACERIKAERKC EVHGSVIRCGYDGDVIVCTNLVKCYS MGS+C AQQVFD+MPARDLVAWNAMISCFSQQGLH E+L+TYNQMRSE
Subjt:  SSPDTFTFSFVLKACERIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQQGLHLESLETYNQMRSE

Query:  NVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE
        NVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNALIDMYAKCGSLD+AI IFDRMQ+KDIFTWNSMIVGYGVHGRGSEAIYCFQ+MLE
Subjt:  NVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE

Query:  ARMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALEIVSNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSL
        ARMQPNS+TFLGLLCGCSHQGLVQEGVKYF+LMSS+FRLRPEVKHYGCLVDLYGRAGKLEKALEIV NSSQNDPVLWRILLGSCKIHKN+ IGEIAM SL
Subjt:  ARMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALEIVSNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSL

Query:  CELGATNAGDCILLATIYAGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGDESISSLDVLST
         ELGATNAGDCILLATIYAG+ DT GVARMRKMIK QGIKTTPGWSWIEI +QVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGD S+SSLDVLST
Subjt:  CELGATNAGDCILLATIYAGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGDESISSLDVLST

Query:  TETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW
        TETLKTSCTYHSEKLAIAFGLAR +DGTQIRIVKNLRVCRDCHSFIKAVS AFNREIIVRDRVRFHHF GGQCSCNDYW
Subjt:  TETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LH20 DYW_deaminase domain-containing protein

0.0e+00

Show/hide

Query:  MSKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLFHQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASF
        MS EKAI+ LLQGCN+L +LRKIHAHVIVSGL  HV I NKLLNFCAISVSGSLAYAQLLFHQM CPQTEAWNSIIRGFAQSSSPI+AIVFYN+M+  SF
Subjt:  MSKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLFHQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASF

Query:  SSPDTFTFSFVLKACERIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQQGLHLESLETYNQMRSE
        S PDTFTFSFVLKACERIKAERKCKEVHGSVIRCGYD DVIVCTNLVKCYS MGSVC A+QVFD+MPARDLVAWNAMISCFSQQGLH E+L+TYNQMRSE
Subjt:  SSPDTFTFSFVLKACERIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQQGLHLESLETYNQMRSE

Query:  NVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE
        NVD+DGFTLVGLISSCAHLGALNIGVQMHRFARE GL QSLYVGNALIDMYAKCGSLDQAILIFDRMQ+KDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE
Subjt:  NVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE

Query:  ARMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALEIVSNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSL
        AR+QPN +TFLGLLCGCSHQGLVQEGVKYF+LMSS+FRL+PEVKHYGCLVDLYGRAGKL+KALEIVSNSS ND VLWRILLGSCKIHKNVTIGEIAMN L
Subjt:  ARMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALEIVSNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSL

Query:  CELGATNAGDCILLATIYAGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGDESISSLDVLST
         ELGAT+AGDCILLATIYAG+ D AGVARMRKMIK QG KTTPGWSWIEI +QVHKFVVDDKSHRYS+EVYEKLREVIHQAS FGYVGDESISSLD+LST
Subjt:  CELGATNAGDCILLATIYAGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGDESISSLDVLST

Query:  TETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYWL
         ETLKTSCTYHSEKLAIAFGLAR +DGTQIRIVKNLRVCRDCHSFIKAVS AFNREIIVRDRVRFHHF GG+CSCNDYW+
Subjt:  TETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYWL

A0A1S4DU66 pentatricopeptide repeat-containing protein At3g56550

3.8e-308

90.33

Show/hide

Query:  MSKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLFHQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASF
        MSKEKAI+TLLQGCN+L +LRKIHAHVIVSGL  HVAI NKLLNFCAISVSGSLAYAQLLFHQ   PQTEAWNSIIRGFAQSSSPI+AIVFYN+M+  SF
Subjt:  MSKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLFHQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASF

Query:  SSPDTFTFSFVLKACERIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQQGLHLESLETYNQMRSE
        S  DTFTFSFVLKACERIKAERKCKEVHG+VIRCGYD DVIVCTNLVKCYS MGSV  A+QVFD+MPARDLVAWNAMISCFSQQGLH E+L+TYNQMRSE
Subjt:  SSPDTFTFSFVLKACERIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQQGLHLESLETYNQMRSE

Query:  NVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE
        NVD+DGFTLVGLISSCAHLGALNIGVQMHRFARE GL QSLYVGNALIDMYAKCGSLDQAILIFDRMQ+KDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE
Subjt:  NVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE

Query:  ARMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALEIVSNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSL
        AR+QPNSITFLGLLCGCSHQGLVQEGVKYF+LMSS+FRLRPEVKHYGCLVDLYGRAGKLEKALEIVSNSS ND VLWR LLGSCKIHKNVTIGEIAMN L
Subjt:  ARMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALEIVSNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSL

Query:  CELGATNAGDCILLATIYAGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGDESISSLDVLST
         ELGAT+AGDCILLATIYAG+ND AGV+RMRKMIK QGIKTTPGWSWIEI +QVHKFVVDDKS+RYSIEVYEKLREVI+QAS FGYVGDES+SSLDVLST
Subjt:  CELGATNAGDCILLATIYAGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGDESISSLDVLST

Query:  TETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW
         ETLKTSCTYHSEKLAIAFGLAR +DGTQIRIVKNLRVCRDCHSFIKAVS AFNREIIVRDRVRFHHF GG+CSCNDYW
Subjt:  TETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW

A0A5A7TXJ9 Pentatricopeptide repeat-containing protein

3.8e-308

90.33

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Query:  MSKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLFHQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASF
        MSKEKAI+TLLQGCN+L +LRKIHAHVIVSGL  HVAI NKLLNFCAISVSGSLAYAQLLFHQ   PQTEAWNSIIRGFAQSSSPI+AIVFYN+M+  SF
Subjt:  MSKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLFHQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASF

Query:  SSPDTFTFSFVLKACERIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQQGLHLESLETYNQMRSE
        S  DTFTFSFVLKACERIKAERKCKEVHG+VIRCGYD DVIVCTNLVKCYS MGSV  A+QVFD+MPARDLVAWNAMISCFSQQGLH E+L+TYNQMRSE
Subjt:  SSPDTFTFSFVLKACERIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQQGLHLESLETYNQMRSE

Query:  NVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE
        NVD+DGFTLVGLISSCAHLGALNIGVQMHRFARE GL QSLYVGNALIDMYAKCGSLDQAILIFDRMQ+KDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE
Subjt:  NVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE

Query:  ARMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALEIVSNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSL
        AR+QPNSITFLGLLCGCSHQGLVQEGVKYF+LMSS+FRLRPEVKHYGCLVDLYGRAGKLEKALEIVSNSS ND VLWR LLGSCKIHKNVTIGEIAMN L
Subjt:  ARMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALEIVSNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSL

Query:  CELGATNAGDCILLATIYAGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGDESISSLDVLST
         ELGAT+AGDCILLATIYAG+ND AGV+RMRKMIK QGIKTTPGWSWIEI +QVHKFVVDDKS+RYSIEVYEKLREVI+QAS FGYVGDES+SSLDVLST
Subjt:  CELGATNAGDCILLATIYAGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGDESISSLDVLST

Query:  TETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW
         ETLKTSCTYHSEKLAIAFGLAR +DGTQIRIVKNLRVCRDCHSFIKAVS AFNREIIVRDRVRFHHF GG+CSCNDYW
Subjt:  TETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW

A0A6J1D832 pentatricopeptide repeat-containing protein At3g56550

1.5e-301

86.18

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Query:  MSKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLFHQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASF
        MS EKAI+TLLQGCN+LNKLRKIHAHVI+SGLR H AIGNKLLNFCAISVSGSL YA+LLF  M CPQTEAWNSIIRGFAQS+SPIEA+V+YN+M+ AS 
Subjt:  MSKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLFHQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASF

Query:  SSPDTFTFSFVLKACERIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQQGLHLESLETYNQMRSE
        S PDTFTFSFVLKACER+KAERKC+EVHGSVIR GYDGDVI+CTNL+KCY+ MG +C AQQVFD+MP RDLVAWNAMISC+SQQGLH E+LETYNQMRS 
Subjt:  SSPDTFTFSFVLKACERIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQQGLHLESLETYNQMRSE

Query:  NVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE
        NVDVDGFTLVGL+SSCAHLGALNIGVQMHRFAREKGLV+SLYVGNALIDMYAKCGSLDQAILIFDRMQ+KD+FTWNSMIVGYGVHGRG+EAI+CFQQMLE
Subjt:  NVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE

Query:  ARMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALEIVSNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSL
        AR+QP+S+TFLGLLCGCSHQGLVQEGVK+F+LMSS+FRLRPEVKHYGCLVDLYGRAGKLEKALEI+ NSSQNDPVLWRILLGSCKIHKNV IGEIAMN+L
Subjt:  ARMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALEIVSNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSL

Query:  CELGATNAGDCILLATIYAGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGDESISSLDVLST
         +LGATNAGDCILLATIYAG  +T+GV RMRKMI+ QGIKTTPGWSWIEI +QVHKFVVDDKSHRY IEVYEKL+EVIHQASLFGY+GD   S+ DV ST
Subjt:  CELGATNAGDCILLATIYAGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGDESISSLDVLST

Query:  TETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW
        +E L+TSC+YHSEKLAIAFGLAR +DGTQIRIVKNLRVCRDCHSF+KAVS AFNREIIVRDRVRFHHF GGQCSCNDYW
Subjt:  TETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW

A0A6J1FBZ0 pentatricopeptide repeat-containing protein At3g56550

1.4e-299

86.87

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Query:  MSKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLFHQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASF
        MSKEKAI+TLLQGCN+LNKLRKIHAHV+VSGLR HVAI NKLLNFCAISVSGSLAYAQLLFHQM C QTEAWNSIIRGFAQSSSPI+A+V+YN+M+ ASF
Subjt:  MSKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLFHQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASF

Query:  SSPDTFTFSFVLKACERIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQQGLHLESLETYNQMRSE
        SSPDTFTFSFVLKACER+KAERKCKE+HG++IRCGYDGDVI+CTNLVKCY+ MGSVC A QVFDEMP RDLVAWNAMISCFSQQGLH E+L+ YNQMRSE
Subjt:  SSPDTFTFSFVLKACERIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQQGLHLESLETYNQMRSE

Query:  NVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE
        NVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLV+SLYVGNALIDMYAKCGSLDQAI IFDRM +KDIFTWNSMIVGYGVHGRG+EAI+CF++MLE
Subjt:  NVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE

Query:  ARMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALEIVSNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSL
        ARMQPNS+TFLGLLCGCSHQGLVQEGVKYF+LMSS+FRLRPEVKHYGCLVDLYGRAGKLEKALE + NSS NDPVLWRILLGSCKIHKNV +GEIAMN+L
Subjt:  ARMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALEIVSNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSL

Query:  CELGATNAGDCILLATIYAGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGDESISSLDVLST
         ELGATNAGDCILLATIYAG NDTAGVA MRK IK QGIKT+PGWSWIEI +QVHKFVVDDKSHR SIEVYEKLREV+HQASLFGYV D           
Subjt:  CELGATNAGDCILLATIYAGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGDESISSLDVLST

Query:  TETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW
         ETLKTS TYHSEKLAIAFGLAR +DGT IRIVKNLRVCRDCHSF+KAVS AF+REIIVRDRVRFHHF GGQCSCNDYW
Subjt:  TETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW

SwissProt top hits

e value

%identity

Alignment

A8MQA3 Pentatricopeptide repeat-containing protein At4g21065

9.1e-126

40.93

Show/hide

Query:  ITLLQ--GCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSG--SLAYAQLLFHQMACP-QTEAWNSIIRGFAQSSSPIEAIVFYNRMISASFSS
        I LLQ  G +++ KLR+IHA  I  G+    A   K L F  +S+     ++YA  +F ++  P     WN++IRG+A+  + I A   Y  M  +    
Subjt:  ITLLQ--GCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSG--SLAYAQLLFHQMACP-QTEAWNSIIRGFAQSSSPIEAIVFYNRMISASFSS

Query:  PDTFTFSFVLKACERIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQQGLHLESLETYNQMRSENV
        PDT T+ F++KA   +   R  + +H  VIR G+   + V  +L+  Y+  G V SA +VFD+MP +DLVAWN++I+ F++ G   E+L  Y +M S+ +
Subjt:  PDTFTFSFVLKACERIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQQGLHLESLETYNQMRSENV

Query:  DVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEAR
          DGFT+V L+S+CA +GAL +G ++H +  + GL ++L+  N L+D+YA+CG +++A  +FD M  K+  +W S+IVG  V+G G EAI  F+ M    
Subjt:  DVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEAR

Query:  -MQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALE-IVSNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSL
         + P  ITF+G+L  CSH G+V+EG +YF  M  E+++ P ++H+GC+VDL  RAG+++KA E I S   Q + V+WR LLG+C +H +  + E A   +
Subjt:  -MQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALE-IVSNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSL

Query:  CELGATNAGDCILLATIYAGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGDESISSLDVLST
         +L   ++GD +LL+ +YA +   + V ++RK + R G+K  PG S +E+ ++VH+F++ DKSH  S  +Y KL+E+  +    GYV    IS++ V   
Subjt:  CELGATNAGDCILLATIYAGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGDESISSLDVLST

Query:  TETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW
         E  + +  YHSEK+AIAF L    + + I +VKNLRVC DCH  IK VS  +NREI+VRDR RFHHF  G CSC DYW
Subjt:  TETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW

Q8LK93 Pentatricopeptide repeat-containing protein At2g02980, chloroplastic

9.1e-118

38.85

Show/hide

Query:  ITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAIS-VSGSLAYAQLLFHQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASFSSPDTF
        I L+  CN+L +L +I A+ I S + D V+   KL+NFC  S    S++YA+ LF  M+ P    +NS+ RG+++ ++P+E    +  ++      PD +
Subjt:  ITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAIS-VSGSLAYAQLLFHQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASFSSPDTF

Query:  TFSFVLKACERIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQQGLHLESLETYNQMRSENVDVDG
        TF  +LKAC   KA  + +++H   ++ G D +V VC  L+  Y+    V SA+ VFD +    +V +NAMI+ ++++    E+L  + +M+ + +  + 
Subjt:  TFSFVLKACERIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQQGLHLESLETYNQMRSENVDVDG

Query:  FTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEARMQPN
         TL+ ++SSCA LG+L++G  +H++A++    + + V  ALIDM+AKCGSLD A+ IF++M+ KD   W++MIV Y  HG+  +++  F++M    +QP+
Subjt:  FTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEARMQPN

Query:  SITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALEIVSN-SSQNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGA
         ITFLGLL  CSH G V+EG KYF  M S+F + P +KHYG +VDL  RAG LE A E +        P+LWRILL +C  H N+ + E     + EL  
Subjt:  SITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALEIVSN-SSQNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGA

Query:  TNAGDCILLATIYAGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGDESISSLDVLSTTETLK
        ++ GD ++L+ +YA       V  +RK++K +     PG S IE+ + VH+F   D     + +++  L E++ +  L GYV D S+     ++  E  +
Subjt:  TNAGDCILLATIYAGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGDESISSLDVLSTTETLK

Query:  TSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW
         +  YHSEKLAI FGL     GT IR+VKNLRVCRDCH+  K +S  F R++++RD  RFHHF  G+CSC D+W
Subjt:  TSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW

Q8VXZ9 Polyadenylate-binding protein RBP47B'

6.4e-164

69.01

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Query:  PSFPGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFG
        P  P Q ++H P T+EEVRTLWIGDLQYWVDE+YL SCF+ TGE++S+K+IRNKITGQPEGYGF+EF+SHAAAER LQTYNGTQMPGTE TFRLNWASFG
Subjt:  PSFPGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFG

Query:  IGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGIYCSTRPMRISAATPKKTIGVQQQ
         G+ + DAGP+HSIFVGDLAPDVTDYLLQETFRV Y SVRGAKVVTDP+TGRSKGYGFVKFA+E+ERNRAM+EMNG+YCSTRPMRISAATPKK +GVQQQ
Subjt:  IGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGIYCSTRPMRISAATPKKTIGVQQQ

Query:  YSLGKAMYPVP-----AYTTSVPVLPADYDANNTTIFVGNLDPNITEEELKQTFLQFGEIAYVKIPSGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVR
        Y + KA+YPV      A      V P + D   TTI V NLD N+TEEELK+ F Q GE+ YVKIP+ KG G+VQF TR SAEEA+Q+MQG++IGQQ VR
Subjt:  YSLGKAMYPVP-----AYTTSVPVLPADYDANNTTIFVGNLDPNITEEELKQTFLQFGEIAYVKIPSGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVR

Query:  TSWGRNPAAKQDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYASYPQQVDGVQDLA-AVAGAVPSVEQGEEWNDTLDTPDVDYLN
         SW +NP   QD   W  Q DPNQW+ YYGYG  YDAY YG  QDPS+YAYG Y GY  YPQQ +G QD++ + AG V   EQ  E  D L TPDVD LN
Subjt:  TSWGRNPAAKQDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYASYPQQVDGVQDLA-AVAGAVPSVEQGEEWNDTLDTPDVDYLN

Query:  DAYLSKHESAILGWPLWLTTSSLVRQ
         AYLS H SAILG P+W  TSSL  Q
Subjt:  DAYLSKHESAILGWPLWLTTSSLVRQ

Q9FI80 Pentatricopeptide repeat-containing protein At5g48910

1.3e-116

36.35

Show/hide

Query:  SKEKAIITLLQGCNNLNKLRKIHAHVIVSG-LRDHVAIGNKLLNFCAIS--VSGSLAYAQLLFHQMACPQTEAWNSIIRGFAQS--SSPIEAIVFYNRMI
        S   ++   +  C  +  L +IHA  I SG +RD +A   ++L FCA S      L YA  +F+QM      +WN+IIRGF++S     + AI  +  M+
Subjt:  SKEKAIITLLQGCNNLNKLRKIHAHVIVSG-LRDHVAIGNKLLNFCAIS--VSGSLAYAQLLFHQMACPQTEAWNSIIRGFAQS--SSPIEAIVFYNRMI

Query:  SASFSSPDTFTFSFVLKACERIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSV--------------------------------------------
        S  F  P+ FTF  VLKAC +    ++ K++HG  ++ G+ GD  V +NLV+ Y +                                            
Subjt:  SASFSSPDTFTFSFVLKACERIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSV--------------------------------------------

Query:  -MGSVCSAQQVFDEMPARDLVAWNAMISCFSQQGLHLESLETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNALIDMY
         +G   +A+ +FD+M  R +V+WN MIS +S  G   +++E + +M+  ++  +  TLV ++ + + LG+L +G  +H +A + G+     +G+ALIDMY
Subjt:  -MGSVCSAQQVFDEMPARDLVAWNAMISCFSQQGLHLESLETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNALIDMY

Query:  AKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEARMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVD
        +KCG +++AI +F+R+ ++++ TW++MI G+ +HG+  +AI CF +M +A ++P+ + ++ LL  CSH GLV+EG +YF  M S   L P ++HYGC+VD
Subjt:  AKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEARMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVD

Query:  LYGRAGKLEKALEIVSNSS-QNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATIYAGKNDTAGVARMRKMIKRQGIKTTPGWSWIEI
        L GR+G L++A E + N   + D V+W+ LLG+C++  NV +G+   N L ++   ++G  + L+ +YA + + + V+ MR  +K + I+  PG S I+I
Subjt:  LYGRAGKLEKALEIVSNSS-QNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATIYAGKNDTAGVARMRKMIKRQGIKTTPGWSWIEI

Query:  EDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGDESISSLDVLSTTETLKTSCT-YHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSFIKAV
        +  +H+FVV+D SH  + E+   L E+  +  L GY     I++  +L+  E  K +   YHSEK+A AFGL   S G  IRIVKNLR+C DCHS IK +
Subjt:  EDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGDESISSLDVLSTTETLKTSCT-YHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSFIKAV

Query:  SAAFNREIIVRDRVRFHHFNGGQCSCNDYW
        S  + R+I VRDR RFHHF  G CSC DYW
Subjt:  SAAFNREIIVRDRVRFHHFNGGQCSCNDYW

Q9LXY5 Pentatricopeptide repeat-containing protein At3g56550

9.8e-205

59.93

Show/hide

Query:  KEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLF-HQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASFS
        K + I+ +LQGCN++ KLRKIH+HVI++GL+ H +I N LL FCA+SV+GSL++AQLLF H  + P T  WN +IRGF+ SSSP+ +I+FYNRM+ +S S
Subjt:  KEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLF-HQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASFS

Query:  SPDTFTFSFVLKACERIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQQGLHLESLETYNQMRSEN
         PD FTF+F LK+CERIK+  KC E+HGSVIR G+  D IV T+LV+CYS  GSV  A +VFDEMP RDLV+WN MI CFS  GLH ++L  Y +M +E 
Subjt:  SPDTFTFSFVLKACERIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQQGLHLESLETYNQMRSEN

Query:  VDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEA
        V  D +TLV L+SSCAH+ ALN+GV +HR A +      ++V NALIDMYAKCGSL+ AI +F+ M+K+D+ TWNSMI+GYGVHG G EAI  F++M+ +
Subjt:  VDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEA

Query:  RMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALEIV-SNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSL
         ++PN+ITFLGLL GCSHQGLV+EGV++F +MSS+F L P VKHYGC+VDLYGRAG+LE +LE++ ++S   DPVLWR LLGSCKIH+N+ +GE+AM  L
Subjt:  RMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALEIV-SNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSL

Query:  CELGATNAGDCILLATIYAGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGDESISSLDVLST
         +L A NAGD +L+ +IY+  ND    A MRK+I+   ++T PGWSWIEI DQVHKFVVDDK H  S  +Y +L EVI++A L GY  ++S  +   LS 
Subjt:  CELGATNAGDCILLATIYAGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGDESISSLDVLST

Query:  TETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW
           L ++ T HSEKLAIA+GL R + GT +RI KNLRVCRDCHSF K VS AFNREIIVRDRVRFHHF  G CSCNDYW
Subjt:  TETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW

Arabidopsis top hits

e value

%identity

Alignment

AT2G02980.1 Pentatricopeptide repeat (PPR) superfamily protein

6.5e-119

38.85

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Query:  ITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAIS-VSGSLAYAQLLFHQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASFSSPDTF
        I L+  CN+L +L +I A+ I S + D V+   KL+NFC  S    S++YA+ LF  M+ P    +NS+ RG+++ ++P+E    +  ++      PD +
Subjt:  ITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAIS-VSGSLAYAQLLFHQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASFSSPDTF

Query:  TFSFVLKACERIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQQGLHLESLETYNQMRSENVDVDG
        TF  +LKAC   KA  + +++H   ++ G D +V VC  L+  Y+    V SA+ VFD +    +V +NAMI+ ++++    E+L  + +M+ + +  + 
Subjt:  TFSFVLKACERIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQQGLHLESLETYNQMRSENVDVDG

Query:  FTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEARMQPN
         TL+ ++SSCA LG+L++G  +H++A++    + + V  ALIDM+AKCGSLD A+ IF++M+ KD   W++MIV Y  HG+  +++  F++M    +QP+
Subjt:  FTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEARMQPN

Query:  SITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALEIVSN-SSQNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGA
         ITFLGLL  CSH G V+EG KYF  M S+F + P +KHYG +VDL  RAG LE A E +        P+LWRILL +C  H N+ + E     + EL  
Subjt:  SITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALEIVSN-SSQNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGA

Query:  TNAGDCILLATIYAGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGDESISSLDVLSTTETLK
        ++ GD ++L+ +YA       V  +RK++K +     PG S IE+ + VH+F   D     + +++  L E++ +  L GYV D S+     ++  E  +
Subjt:  TNAGDCILLATIYAGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGDESISSLDVLSTTETLK

Query:  TSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW
         +  YHSEKLAI FGL     GT IR+VKNLRVCRDCH+  K +S  F R++++RD  RFHHF  G+CSC D+W
Subjt:  TSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW

AT3G56550.1 Pentatricopeptide repeat (PPR) superfamily protein

7.0e-206

59.93

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Query:  KEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLF-HQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASFS
        K + I+ +LQGCN++ KLRKIH+HVI++GL+ H +I N LL FCA+SV+GSL++AQLLF H  + P T  WN +IRGF+ SSSP+ +I+FYNRM+ +S S
Subjt:  KEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLF-HQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASFS

Query:  SPDTFTFSFVLKACERIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQQGLHLESLETYNQMRSEN
         PD FTF+F LK+CERIK+  KC E+HGSVIR G+  D IV T+LV+CYS  GSV  A +VFDEMP RDLV+WN MI CFS  GLH ++L  Y +M +E 
Subjt:  SPDTFTFSFVLKACERIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQQGLHLESLETYNQMRSEN

Query:  VDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEA
        V  D +TLV L+SSCAH+ ALN+GV +HR A +      ++V NALIDMYAKCGSL+ AI +F+ M+K+D+ TWNSMI+GYGVHG G EAI  F++M+ +
Subjt:  VDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEA

Query:  RMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALEIV-SNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSL
         ++PN+ITFLGLL GCSHQGLV+EGV++F +MSS+F L P VKHYGC+VDLYGRAG+LE +LE++ ++S   DPVLWR LLGSCKIH+N+ +GE+AM  L
Subjt:  RMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALEIV-SNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSL

Query:  CELGATNAGDCILLATIYAGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGDESISSLDVLST
         +L A NAGD +L+ +IY+  ND    A MRK+I+   ++T PGWSWIEI DQVHKFVVDDK H  S  +Y +L EVI++A L GY  ++S  +   LS 
Subjt:  CELGATNAGDCILLATIYAGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGDESISSLDVLST

Query:  TETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW
           L ++ T HSEKLAIA+GL R + GT +RI KNLRVCRDCHSF K VS AFNREIIVRDRVRFHHF  G CSCNDYW
Subjt:  TETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW

AT4G21065.1 Tetratricopeptide repeat (TPR)-like superfamily protein

6.5e-127

40.93

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Query:  ITLLQ--GCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSG--SLAYAQLLFHQMACP-QTEAWNSIIRGFAQSSSPIEAIVFYNRMISASFSS
        I LLQ  G +++ KLR+IHA  I  G+    A   K L F  +S+     ++YA  +F ++  P     WN++IRG+A+  + I A   Y  M  +    
Subjt:  ITLLQ--GCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSG--SLAYAQLLFHQMACP-QTEAWNSIIRGFAQSSSPIEAIVFYNRMISASFSS

Query:  PDTFTFSFVLKACERIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQQGLHLESLETYNQMRSENV
        PDT T+ F++KA   +   R  + +H  VIR G+   + V  +L+  Y+  G V SA +VFD+MP +DLVAWN++I+ F++ G   E+L  Y +M S+ +
Subjt:  PDTFTFSFVLKACERIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQQGLHLESLETYNQMRSENV

Query:  DVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEAR
          DGFT+V L+S+CA +GAL +G ++H +  + GL ++L+  N L+D+YA+CG +++A  +FD M  K+  +W S+IVG  V+G G EAI  F+ M    
Subjt:  DVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEAR

Query:  -MQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALE-IVSNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSL
         + P  ITF+G+L  CSH G+V+EG +YF  M  E+++ P ++H+GC+VDL  RAG+++KA E I S   Q + V+WR LLG+C +H +  + E A   +
Subjt:  -MQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALE-IVSNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSL

Query:  CELGATNAGDCILLATIYAGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGDESISSLDVLST
         +L   ++GD +LL+ +YA +   + V ++RK + R G+K  PG S +E+ ++VH+F++ DKSH  S  +Y KL+E+  +    GYV    IS++ V   
Subjt:  CELGATNAGDCILLATIYAGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGDESISSLDVLST

Query:  TETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW
         E  + +  YHSEK+AIAF L    + + I +VKNLRVC DCH  IK VS  +NREI+VRDR RFHHF  G CSC DYW
Subjt:  TETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW

AT5G19350.1 RNA-binding (RRM/RBD/RNP motifs) family protein

4.6e-165

69.01

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Query:  PSFPGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFG
        P  P Q ++H P T+EEVRTLWIGDLQYWVDE+YL SCF+ TGE++S+K+IRNKITGQPEGYGF+EF+SHAAAER LQTYNGTQMPGTE TFRLNWASFG
Subjt:  PSFPGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFG

Query:  IGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGIYCSTRPMRISAATPKKTIGVQQQ
         G+ + DAGP+HSIFVGDLAPDVTDYLLQETFRV Y SVRGAKVVTDP+TGRSKGYGFVKFA+E+ERNRAM+EMNG+YCSTRPMRISAATPKK +GVQQQ
Subjt:  IGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGIYCSTRPMRISAATPKKTIGVQQQ

Query:  YSLGKAMYPVP-----AYTTSVPVLPADYDANNTTIFVGNLDPNITEEELKQTFLQFGEIAYVKIPSGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVR
        Y + KA+YPV      A      V P + D   TTI V NLD N+TEEELK+ F Q GE+ YVKIP+ KG G+VQF TR SAEEA+Q+MQG++IGQQ VR
Subjt:  YSLGKAMYPVP-----AYTTSVPVLPADYDANNTTIFVGNLDPNITEEELKQTFLQFGEIAYVKIPSGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVR

Query:  TSWGRNPAAKQDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYASYPQQVDGVQDLA-AVAGAVPSVEQGEEWNDTLDTPDVDYLN
         SW +NP   QD   W  Q DPNQW+ YYGYG  YDAY YG  QDPS+YAYG Y GY  YPQQ +G QD++ + AG V   EQ  E  D L TPDVD LN
Subjt:  TSWGRNPAAKQDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYASYPQQVDGVQDLA-AVAGAVPSVEQGEEWNDTLDTPDVDYLN

Query:  DAYLSKHESAILGWPLWLTTSSLVRQ
         AYLS H SAILG P+W  TSSL  Q
Subjt:  DAYLSKHESAILGWPLWLTTSSLVRQ

AT5G19350.2 RNA-binding (RRM/RBD/RNP motifs) family protein

5.1e-164

68.65

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Query:  PSFPGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFG
        P  P Q ++H P T+EEVRTLWIGDLQYWVDE+YL SCF+ TGE++S+K+IRNKITGQPEGYGF+EF+SHAAAER LQTYNGTQMPGTE TFRLNWASFG
Subjt:  PSFPGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFG

Query:  IGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGIYCSTRPMRISAATPKKTIGVQQQ
         G+ + DAGP+HSIFVGDLAPDVTDYLLQETFRV Y SVRGAKVVTDP+TGRSKGYGFVKFA+E+ERNRAM+EMNG+YCSTRPMRISAATPKK +GVQQQ
Subjt:  IGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGIYCSTRPMRISAATPKKTIGVQQQ

Query:  YSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPNITEEELKQTFLQFGEIAYVKIPSGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGR
        Y     +    A      V P + D   TTI V NLD N+TEEELK+ F Q GE+ YVKIP+ KG G+VQF TR SAEEA+Q+MQG++IGQQ VR SW +
Subjt:  YSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPNITEEELKQTFLQFGEIAYVKIPSGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGR

Query:  NPAAKQDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYASYPQQVDGVQDLA-AVAGAVPSVEQGEEWNDTLDTPDVDYLNDAYLS
        NP   QD   W  Q DPNQW+ YYGYG  YDAY YG  QDPS+YAYG Y GY  YPQQ +G QD++ + AG V   EQ  E  D L TPDVD LN AYLS
Subjt:  NPAAKQDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYASYPQQVDGVQDLA-AVAGAVPSVEQGEEWNDTLDTPDVDYLNDAYLS

Query:  KHESAILGWPLWLTTSSLVRQ
         H SAILG P+W  TSSL  Q
Subjt:  KHESAILGWPLWLTTSSLVRQ

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCGAAGGAAAAAGCCATTATCACTCTCTTGCAAGGCTGCAACAACCTCAACAAGCTTCGCAAAATCCACGCACATGTTATTGTAAGCGGCCTCCGCGATCATGTCGC
CATTGGCAACAAGCTTTTGAACTTCTGTGCCATCTCTGTTTCAGGTTCCCTTGCTTATGCCCAGCTTCTCTTCCATCAAATGGCGTGCCCACAAACCGAAGCCTGGAACT
CCATCATCAGAGGTTTTGCCCAGAGCTCATCTCCCATTGAGGCTATTGTTTTCTACAATCGAATGATTTCGGCCTCTTTTTCTTCCCCTGACACTTTCACTTTCTCATTT
GTGCTCAAAGCCTGTGAAAGAATCAAGGCTGAGCGTAAGTGTAAAGAAGTTCATGGCTCTGTAATCCGTTGCGGTTATGATGGGGATGTGATTGTCTGCACCAATCTTGT
CAAATGCTATTCGGTGATGGGGTCCGTTTGTAGTGCCCAACAGGTGTTTGACGAAATGCCTGCAAGAGACTTGGTGGCTTGGAATGCTATGATTTCCTGCTTTTCTCAAC
AGGGTTTGCACCTGGAGTCACTGGAGACATACAATCAGATGAGAAGTGAAAATGTGGATGTAGATGGTTTTACACTCGTTGGGTTGATTTCGTCTTGTGCCCATCTTGGA
GCTTTGAATATTGGGGTTCAGATGCATAGATTTGCTCGTGAAAAGGGTCTTGTGCAGAGTCTTTATGTTGGAAATGCGTTGATAGATATGTATGCTAAATGTGGCAGTTT
AGATCAGGCCATTCTTATCTTTGATAGAATGCAGAAGAAGGACATTTTCACTTGGAACTCGATGATTGTTGGGTATGGAGTTCATGGTCGAGGTAGTGAAGCTATATATT
GCTTTCAACAGATGTTAGAAGCAAGAATGCAACCGAACTCTATCACATTTTTGGGTTTACTTTGTGGATGTAGTCATCAAGGCTTGGTTCAAGAAGGTGTTAAATACTTC
CATTTGATGAGCTCTGAGTTTAGGCTAAGACCTGAGGTTAAACACTATGGATGCCTTGTGGATTTATATGGTCGAGCTGGGAAGCTTGAGAAGGCACTTGAAATTGTATC
AAATTCATCACAGAATGATCCAGTTTTGTGGCGAATCTTACTTGGCTCTTGCAAGATTCACAAAAATGTGACAATAGGAGAAATTGCCATGAACAGTCTGTGTGAGCTTG
GAGCTACAAATGCAGGGGATTGTATATTGTTGGCTACAATCTATGCGGGAAAAAATGATACAGCTGGTGTTGCAAGAATGAGAAAAATGATAAAGAGGCAAGGGATAAAG
ACTACCCCAGGTTGGAGTTGGATTGAAATTGAGGATCAAGTTCATAAATTTGTGGTTGATGACAAGTCCCATCGTTATTCCATTGAAGTTTATGAGAAGTTGAGGGAAGT
TATTCATCAAGCTTCCTTGTTTGGATATGTAGGAGATGAGTCTATTTCATCACTGGATGTGCTTTCTACCACAGAGACCTTAAAGACTTCATGTACATATCATAGTGAGA
AACTTGCAATTGCATTTGGATTGGCAAGAATTTCAGATGGGACACAGATACGCATTGTTAAAAACCTTAGAGTTTGTAGAGATTGTCATTCATTCATAAAAGCTGTCTCG
GCGGCATTCAACCGAGAAATAATTGTTAGAGATCGGGTTAGATTCCACCATTTCAATGGTGGTCAATGTTCCTGCAATGACTACTGGCTCCATAAGGCCGCGTTGCAAGC
ACAAACTAAGCTCAAGAAGGATAGTTTACTAGTTGAAACAAAACTTCCGAGCTTCCCCGGTCAACCAACTCACCATCAACCAACTACGGTAGAGGAAGTTAGAACACTTT
GGATAGGGGATTTGCAGTACTGGGTCGATGAGTCTTACCTTAATTCTTGCTTTGCTCACACTGGCGAGGTAATATCAATTAAAATAATTCGCAACAAGATCACTGGCCAG
CCTGAGGGTTATGGGTTTGTGGAGTTTGTATCTCATGCCGCAGCAGAAAGAATTTTGCAGACATACAATGGGACCCAGATGCCTGGAACGGAGCAAACTTTCAGATTGAA
TTGGGCCTCCTTTGGAATTGGAGAAAGGCGCCCGGACGCTGGCCCTGAGCACTCTATTTTTGTGGGGGATTTGGCTCCTGATGTTACAGACTATCTGTTGCAAGAGACCT
TTAGAGTACAATATCCATCTGTTAGGGGTGCTAAAGTTGTGACTGATCCAAACACTGGACGTTCAAAGGGATATGGGTTTGTTAAATTTGCTGATGAAAATGAAAGGAAT
CGAGCTATGTCAGAAATGAATGGTATTTATTGCTCAACTAGGCCTATGCGTATTAGTGCAGCAACACCCAAAAAGACCATTGGTGTTCAGCAGCAATATAGTCTAGGTAA
AGCAATGTACCCAGTTCCAGCCTACACTACATCCGTGCCTGTGCTTCCAGCAGATTATGATGCAAATAACACAACAATCTTTGTCGGTAACTTGGATCCTAATATTACAG
AGGAGGAGTTGAAGCAAACTTTTTTGCAGTTTGGTGAGATTGCTTATGTGAAAATTCCTTCCGGGAAAGGCTGTGGTTTTGTACAGTTTGGGACAAGGGCTTCAGCTGAA
GAAGCCATCCAAAAGATGCAAGGAAAAATAATTGGTCAACAAGTGGTTCGTACTTCTTGGGGTAGAAATCCGGCTGCCAAGCAGGACTTGGCTACTTGGGGTCAGCAAGT
TGATCCAAACCAGTGGAGTGCGTACTATGGGTATGGAGGGACTTATGATGCTTATGGATATGGAGTTGTACAAGATCCATCTTTATATGCTTATGGTGCATATTCGGGTT
ATGCCTCGTATCCTCAACAGGTTGATGGTGTACAAGATTTGGCCGCTGTAGCTGGTGCAGTCCCTTCTGTGGAACAGGGAGAGGAATGGAATGATACGCTTGATACGCCA
GATGTTGATTATTTAAATGATGCATACCTCTCAAAACATGAAAGTGCGATTTTAGGCTGGCCATTATGGTTGACTACCTCATCACTGGTTAGGCAAACATGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLFHQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASFSSPDTFTFSF
VLKACERIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQQGLHLESLETYNQMRSENVDVDGFTLVGLISSCAHLG
ALNIGVQMHRFAREKGLVQSLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEARMQPNSITFLGLLCGCSHQGLVQEGVKYF
HLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALEIVSNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATIYAGKNDTAGVARMRKMIKRQGIK
TTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGDESISSLDVLSTTETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSFIKAVS
AAFNREIIVRDRVRFHHFNGGQCSCNDYWLHKAALQAQTKLKKDSLLVETKLPSFPGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQ
PEGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERN
RAMSEMNGIYCSTRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPNITEEELKQTFLQFGEIAYVKIPSGKGCGFVQFGTRASAE
EAIQKMQGKIIGQQVVRTSWGRNPAAKQDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYASYPQQVDGVQDLAAVAGAVPSVEQGEEWNDTLDTP
DVDYLNDAYLSKHESAILGWPLWLTTSSLVRQT

Clc01G04320 (gene) of Watermelon (cordophanus) v2 genome