; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc01G05145 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G05145
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionorigin of replication complex subunit 3
Genome locationClcChr01:4773236..4774920
RNA-Seq ExpressionClc01G05145
SyntenyClc01G05145
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143732.1 origin of replication complex subunit 3 [Cucumis sativus]9.3e-0492.86Show/hide
Query:  IHENVKDLLLAFKLGNGKSSGKDIADLS
        IH+NVKDLLLAFKLGNGKSS KDIADLS
Subjt:  IHENVKDLLLAFKLGNGKSSGKDIADLS
XP_008467329.1 PREDICTED: origin of replication complex subunit 3 [Cucumis melo]9.3e-0492.86Show/hide
Query:  IHENVKDLLLAFKLGNGKSSGKDIADLS
        IH+NVKDLLLAFKLGNGKSS KDIADLS
Subjt:  IHENVKDLLLAFKLGNGKSSGKDIADLS
XP_038906702.1 origin of replication complex subunit 3 isoform X1 [Benincasa hispida]4.2e-0496.43Show/hide
Query:  IHENVKDLLLAFKLGNGKSSGKDIADLS
        IHENVKDLLLAFKLGNGKSS KDIADLS
Subjt:  IHENVKDLLLAFKLGNGKSSGKDIADLS
XP_038906703.1 origin of replication complex subunit 3 isoform X2 [Benincasa hispida]4.2e-0496.43Show/hide
Query:  IHENVKDLLLAFKLGNGKSSGKDIADLS
        IHENVKDLLLAFKLGNGKSS KDIADLS
Subjt:  IHENVKDLLLAFKLGNGKSSGKDIADLS
TrEMBL top hitse value%identityAlignment
A0A0A0KRI1 SWIM-type domain-containing protein4.5e-0492.86Show/hide
Query:  IHENVKDLLLAFKLGNGKSSGKDIADLS
        IH+NVKDLLLAFKLGNGKSS KDIADLS
Subjt:  IHENVKDLLLAFKLGNGKSSGKDIADLS
A0A1S3CUK3 origin of replication complex subunit 34.5e-0492.86Show/hide
Query:  IHENVKDLLLAFKLGNGKSSGKDIADLS
        IH+NVKDLLLAFKLGNGKSS KDIADLS
Subjt:  IHENVKDLLLAFKLGNGKSSGKDIADLS
A0A5A7UIL2 Origin of replication complex subunit 34.5e-0492.86Show/hide
Query:  IHENVKDLLLAFKLGNGKSSGKDIADLS
        IH+NVKDLLLAFKLGNGKSS KDIADLS
Subjt:  IHENVKDLLLAFKLGNGKSSGKDIADLS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACAAGATTTTATTTCGTTTGATGACCCAAGACACTCCAAATTATGGAGTTTGCTATTGAACTTTTCTGATGTTCATCTAGGTATGTATTTGGCTTCTTCTTGTGT
TTTAGGCCTGATATTGGGATTTTCCTTGTTTATTACAAGTGACTTCTATCTAGAACAGAAAGAAAGGAGAAAGCTGTTCATCCATGAAAACGTGAAAGACTTGCTGTTGG
CTTTCAAGCTTGGGAATGGAAAGAGTTCAGGAAAAGACATTGCAGATTTATCCAGCTTGCCATTTTCAATCCTTCAGCTCTTTAATCTCATATTAAATGCAATCAAAAAG
CAATATTTGGCACTGGTTTTTCCCCTCATTGATTCCAAGATCATTGCCATAACTTTATCTAGCTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGACAAGATTTTATTTCGTTTGATGACCCAAGACACTCCAAATTATGGAGTTTGCTATTGAACTTTTCTGATGTTCATCTAGGTATGTATTTGGCTTCTTCTTGTGT
TTTAGGCCTGATATTGGGATTTTCCTTGTTTATTACAAGTGACTTCTATCTAGAACAGAAAGAAAGGAGAAAGCTGTTCATCCATGAAAACGTGAAAGACTTGCTGTTGG
CTTTCAAGCTTGGGAATGGAAAGAGTTCAGGAAAAGACATTGCAGATTTATCCAGCTTGCCATTTTCAATCCTTCAGCTCTTTAATCTCATATTAAATGCAATCAAAAAG
CAATATTTGGCACTGGTTTTTCCCCTCATTGATTCCAAGATCATTGCCATAACTTTATCTAGCTGTTAA
Protein sequenceShow/hide protein sequence
MRQDFISFDDPRHSKLWSLLLNFSDVHLGMYLASSCVLGLILGFSLFITSDFYLEQKERRKLFIHENVKDLLLAFKLGNGKSSGKDIADLSSLPFSILQLFNLILNAIKK
QYLALVFPLIDSKIIAITLSSC