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Clc01G05165 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G05165
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionLRRNT_2 domain-containing protein
Genome locationClcChr01:4795771..4796410
RNA-Seq ExpressionClc01G05165
SyntenyClc01G05165
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143731.2 receptor-like protein EIX2 [Cucumis sativus]2.9e-0660.42Show/hide
Query:  IISFILDFWTVVGGLVLKKSWRYTYFKFVDETNYKVSCIILFQICLRK
        I+ FI+ FW VVG L LKKSWRY YFKFV+E NY+V   I   I L K
Subjt:  IISFILDFWTVVGGLVLKKSWRYTYFKFVDETNYKVSCIILFQICLRK

XP_008437704.1 PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Cucumis melo]9.8e-0770Show/hide
Query:  IISFILDFWTVVGGLVLKKSWRYTYFKFVDETNYKVSCII
        I+ FI+ FW VVG L+LKKSWRY YFKFVDET YKV   I
Subjt:  IISFILDFWTVVGGLVLKKSWRYTYFKFVDETNYKVSCII

XP_008467297.1 PREDICTED: receptor-like protein 12 [Cucumis melo]4.1e-0563.89Show/hide
Query:  IISFILDFWTVVGGLVLKKSWRYTYFKFVDETNYKV
        I+ +I+ FW VVG L+LKKSWRY YFKFV++ +YKV
Subjt:  IISFILDFWTVVGGLVLKKSWRYTYFKFVDETNYKV

XP_011654866.1 receptor-like protein EIX2 [Cucumis sativus]5.8e-0772.5Show/hide
Query:  IISFILDFWTVVGGLVLKKSWRYTYFKFVDETNYKVSCII
        I+ FI+ FWTVVG L LKKSWRY YFKFVDE  YKV  II
Subjt:  IISFILDFWTVVGGLVLKKSWRYTYFKFVDETNYKVSCII

XP_016903722.1 PREDICTED: receptor-like protein 12 [Cucumis melo]5.4e-0555.1Show/hide
Query:  IISFILDFWTVVGGLVLKKSWRYTYFKFVDETNYKVSCIILFQICLRKS
        I+ +I+ FW VVG L+ KKSWRY Y+KFVDE  YKV   I   I L K+
Subjt:  IISFILDFWTVVGGLVLKKSWRYTYFKFVDETNYKVSCIILFQICLRKS

TrEMBL top hitse value%identityAlignment
A0A0A0KKW7 LRRNT_2 domain-containing protein7.6e-0563.41Show/hide
Query:  FWTVVGGLVLKKSWRYTYFKFVDETNYKVSCIILFQICLRK
        FW VVG L LKKSWRY YFKFV+E NY+V   I   I L K
Subjt:  FWTVVGGLVLKKSWRYTYFKFVDETNYKVSCIILFQICLRK

A0A1S3AV79 probable leucine-rich repeat receptor-like protein kinase At1g357104.8e-0770Show/hide
Query:  IISFILDFWTVVGGLVLKKSWRYTYFKFVDETNYKVSCII
        I+ FI+ FW VVG L+LKKSWRY YFKFVDET YKV   I
Subjt:  IISFILDFWTVVGGLVLKKSWRYTYFKFVDETNYKVSCII

A0A1S3CT79 receptor-like protein 122.0e-0563.89Show/hide
Query:  IISFILDFWTVVGGLVLKKSWRYTYFKFVDETNYKV
        I+ +I+ FW VVG L+LKKSWRY YFKFV++ +YKV
Subjt:  IISFILDFWTVVGGLVLKKSWRYTYFKFVDETNYKV

A0A1S4E676 receptor-like protein 122.6e-0555.1Show/hide
Query:  IISFILDFWTVVGGLVLKKSWRYTYFKFVDETNYKVSCIILFQICLRKS
        I+ +I+ FW VVG L+ KKSWRY Y+KFVDE  YKV   I   I L K+
Subjt:  IISFILDFWTVVGGLVLKKSWRYTYFKFVDETNYKVSCIILFQICLRKS

A0A5E4FQU7 PREDICTED: LRR receptor1.3e-0455.81Show/hide
Query:  ISFILDFWTVVGGLVLKKSWRYTYFKFVDETNYKVSCIILFQI
        + FI+ FW V G LVLKKSWRY YFKF D    KV+ II  ++
Subjt:  ISFILDFWTVVGGLVLKKSWRYTYFKFVDETNYKVSCIILFQI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAACAATTTTTTTGGGCACTTCTTCAATATCTCATATCCATGCATCATATCTTTTATATTGGATTTTTGGACCGTTGTTGGAGGTTTAGTATTGAAGAAGAGTTG
GAGATATACTTATTTCAAATTTGTGGATGAGACTAATTACAAGGTTTCATGCATCATCTTATTTCAAATCTGTCTTCGCAAATCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGACAACAATTTTTTTGGGCACTTCTTCAATATCTCATATCCATGCATCATATCTTTTATATTGGATTTTTGGACCGTTGTTGGAGGTTTAGTATTGAAGAAGAGTTG
GAGATATACTTATTTCAAATTTGTGGATGAGACTAATTACAAGGTTTCATGCATCATCTTATTTCAAATCTGTCTTCGCAAATCATAA
Protein sequenceShow/hide protein sequence
MDNNFFGHFFNISYPCIISFILDFWTVVGGLVLKKSWRYTYFKFVDETNYKVSCIILFQICLRKS