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Clc01G05330 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G05330
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr01:4942002..4943192
RNA-Seq ExpressionClc01G05330
SyntenyClc01G05330
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055110.1 hypothetical protein E6C27_scaffold231G00360 [Cucumis melo var. makuwa]2.5e-1463.1Show/hide
Query:  MASKKHFSIISVFVLGLLLLFASTVIANRHLLASPNGRGFEG--QDADDAPWE-NSH------GGWGGGRLQNHTPQRKAKPKT
        MASKKHFS I   VL LLLLF +TV + RHLL SPN  G     Q+A D PWE  SH      GGWGGGR QNHTPQRKAK KT
Subjt:  MASKKHFSIISVFVLGLLLLFASTVIANRHLLASPNGRGFEG--QDADDAPWE-NSH------GGWGGGRLQNHTPQRKAKPKT
KGN50354.1 hypothetical protein Csa_000188 [Cucumis sativus]1.6e-0850.6Show/hide
Query:  MASKKHFSIISVFVLGLLLLFASTVIANRHLLASP--NGRGFEGQDADDAPWENSH------GGWGGGRLQNHTPQRKAKPKT
        MASKKHFS I   V  LLLLF +TV + RHLL SP  NG+ +  Q+A + PW+         GGWGGG  Q  T Q+K K KT
Subjt:  MASKKHFSIISVFVLGLLLLFASTVIANRHLLASP--NGRGFEGQDADDAPWENSH------GGWGGGRLQNHTPQRKAKPKT
TrEMBL top hitse value%identityAlignment
A0A0A0KN68 Uncharacterized protein7.7e-0950.6Show/hide
Query:  MASKKHFSIISVFVLGLLLLFASTVIANRHLLASP--NGRGFEGQDADDAPWENSH------GGWGGGRLQNHTPQRKAKPKT
        MASKKHFS I   V  LLLLF +TV + RHLL SP  NG+ +  Q+A + PW+         GGWGGG  Q  T Q+K K KT
Subjt:  MASKKHFSIISVFVLGLLLLFASTVIANRHLLASP--NGRGFEGQDADDAPWENSH------GGWGGGRLQNHTPQRKAKPKT
A0A5A7UIN4 Uncharacterized protein1.2e-1463.1Show/hide
Query:  MASKKHFSIISVFVLGLLLLFASTVIANRHLLASPNGRGFEG--QDADDAPWE-NSH------GGWGGGRLQNHTPQRKAKPKT
        MASKKHFS I   VL LLLLF +TV + RHLL SPN  G     Q+A D PWE  SH      GGWGGGR QNHTPQRKAK KT
Subjt:  MASKKHFSIISVFVLGLLLLFASTVIANRHLLASPNGRGFEG--QDADDAPWE-NSH------GGWGGGRLQNHTPQRKAKPKT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCAAGAAGCACTTCTCAATAATAAGTGTTTTTGTGTTGGGTCTTCTGCTTCTCTTCGCTTCCACTGTCATCGCAAATAGGCATTTGCTTGCATCTCCTAATGG
ACGAGGATTTGAAGGTCAGGATGCTGATGATGCGCCATGGGAAAACTCGCACGGTGGATGGGGAGGAGGAAGACTTCAAAATCACACACCTCAGCGAAAGGCAAAACCTA
AAACTTAG
mRNA sequenceShow/hide mRNA sequence
CACAAAAATAAGAAGCATAAGAAAAATGGCTTCCAAGAAGCACTTCTCAATAATAAGTGTTTTTGTGTTGGGTCTTCTGCTTCTCTTCGCTTCCACTGTCATCGCAAATA
GGCATTTGCTTGCATCTCCTAATGGACGAGGATTTGAAGGTCAGGATGCTGATGATGCGCCATGGGAAAACTCGCACGGTGGATGGGGAGGAGGAAGACTTCAAAATCAC
ACACCTCAGCGAAAGGCAAAACCTAAAACTTAGAGAATGAATATTGTCCTAAGTGACTCAATCATGTATCCAAAAAGTGTTATAATTAATAAGTATAAGGGCTCCTTGAA
TTTTCTTTCCCAAGTATTTTAAGAATAAAAATCGTTCTTGTAAGCACTTGAAAAGTCATTCTAAATAGACTTAAAATCTGGGTTCTATCTTCTGGGAATTATAAGTATTT
TGGGAACCTCTTCATAAAGTTTGTATTATCTACCAAAAAAAATAAGATCAACTTGTTAGTATTT
Protein sequenceShow/hide protein sequence
MASKKHFSIISVFVLGLLLLFASTVIANRHLLASPNGRGFEGQDADDAPWENSHGGWGGGRLQNHTPQRKAKPKT