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Clc01G05350 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G05350
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr01:4958129..4960552
RNA-Seq ExpressionClc01G05350
SyntenyClc01G05350
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605659.1 hypothetical protein SDJN03_02976, partial [Cucurbita argyrosperma subsp. sororia]4.0e-1063.64Show/hide
Query:  MASNKKHLTILAIVLYLMLFLISTYGAARILNPNVQAFSGNMKALKIKVIVVGRIVRRDLAHGGNY
        M SNKKHL  L IVLYLMLFL S+YGAAR+  PN     G+M A ++K I +GRI+RRDLA+GGNY
Subjt:  MASNKKHLTILAIVLYLMLFLISTYGAARILNPNVQAFSGNMKALKIKVIVVGRIVRRDLAHGGNY
KAG7035570.1 hypothetical protein SDJN02_02367, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-1063.64Show/hide
Query:  MASNKKHLTILAIVLYLMLFLISTYGAARILNPNVQAFSGNMKALKIKVIVVGRIVRRDLAHGGNY
        M SNKKHL  L IVLYLMLFL S+YGAAR+  PN     G+M A ++K I +GRI+RRDLA+GGNY
Subjt:  MASNKKHLTILAIVLYLMLFLISTYGAARILNPNVQAFSGNMKALKIKVIVVGRIVRRDLAHGGNY
KGN50358.1 hypothetical protein Csa_000417 [Cucumis sativus]1.9e-1275Show/hide
Query:  MASNKKHLTILAIVLYLMLFLISTYGAARILNPNVQAFSGNMKALKIKVIVVG-RIVRRDLAHGGNYG
        MAS KKHL ILA +LYLMLFL STYGAARIL+ N     G+MK  +IKVIVVG RIVRRDLAHGGNYG
Subjt:  MASNKKHLTILAIVLYLMLFLISTYGAARILNPNVQAFSGNMKALKIKVIVVG-RIVRRDLAHGGNYG
TrEMBL top hitse value%identityAlignment
A0A0A0KL54 Uncharacterized protein9.2e-1375Show/hide
Query:  MASNKKHLTILAIVLYLMLFLISTYGAARILNPNVQAFSGNMKALKIKVIVVG-RIVRRDLAHGGNYG
        MAS KKHL ILA +LYLMLFL STYGAARIL+ N     G+MK  +IKVIVVG RIVRRDLAHGGNYG
Subjt:  MASNKKHLTILAIVLYLMLFLISTYGAARILNPNVQAFSGNMKALKIKVIVVG-RIVRRDLAHGGNYG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCAATAAGAAGCACTTGACAATTTTAGCAATTGTCTTGTATCTTATGCTTTTCCTAATTTCAACCTATGGAGCAGCAAGGATCTTGAATCCAAATGTT
CAAGCTTTTTCAGGAAATATGAAGGCCCTAAAGATCAAGGTTATTGTAGTAGGACGAATTGTACGACGAGATTTGGCACATGGAGGAAATTATGGTTTTGAGGCT
TTAGAGCACAATAGAAGAATTTACGGATAA
mRNA sequenceShow/hide mRNA sequence
GATGAACACAAAATGGCTTCCAATAAGAAGCACTTGACAATTTTAGCAATTGTCTTGTATCTTATGCTTTTCCTAATTTCAACCTATGGAGCAGCAAGGATCTTG
AATCCAAATGTTCAAGCTTTTTCAGGAAATATGAAGGCCCTAAAGATCAAGGTTATTGTAGTAGGACGAATTGTACGACGAGATTTGGCACATGGAGGAAATTAT
GGTTTTGAGGCTTTAGAGCACAATAGAAGAATTTACGGATAAATTGGAGCTTTTCGGATATTAAAGTGGATTAAATAAGGAGTTCCAACAGTAAGAAGAAGAGGC
AGAGCAGCGCCACGACGTTTTAGCACAAAAGCTAGAAACCTGACAAAGGGTGATGGCACTGCAATGCTACAATGTTTGCCAAAAAGAAGAGTCATTCGTGCTACC
TTTAATTTTCAG
Protein sequenceShow/hide protein sequence
MASNKKHLTILAIVLYLMLFLISTYGAARILNPNVQAFSGNMKALKIKVIVVGRIVRRDLAHGGNYGFEALEHNRRIYG