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Clc01G06050 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G06050
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr01:5758036..5759139
RNA-Seq ExpressionClc01G06050
SyntenyClc01G06050
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAY47055.1 hypothetical protein CUMW_101650 [Citrus unshiu]1.6e-0848.59Show/hide
Query:  GVEARVVTEMGRRVREETAVRVVAVKRREGRGVAGEEGGGGRVLRAVAAGGAFDPNEVAASISDEEEALGRGAKTEVDEVLAGAGGGAGDERGFESGVRA
        GV ARVV  +G    E     V AV  REG GVAGE+GG G    AVAAG A DP+EVAA I +EEE L RGA+ E DEVLAGAGG AG +  FE     
Subjt:  GVEARVVTEMGRRVREETAVRVVAVKRREGRGVAGEEGGGGRVLRAVAAGGAFDPNEVAASISDEEEALGRGAKTEVDEVLAGAGGGAGDERGFESGVRA

Query:  RGEGEGGEEEGEAVGVGGEGLGRGGEGGFMEEGELQIVGGGG
            E GE + +         G GG   F+E+ E +I  GGG
Subjt:  RGEGEGGEEEGEAVGVGGEGLGRGGEGGFMEEGELQIVGGGG

KAB8681452.1 hypothetical protein FH972_026331 [Carpinus fangiana]7.8e-1150Show/hide
Query:  FFGEEAGGEGAISVRVKVSAGGVE---ARVVTEMGRRVREETAVRVVAVKRREGRGVAGEEGGGGRVLRAVA---AGGAFDPNEVAASISDEEEALGRGA
        F GEEA G+GA+SV V V+A GVE   A VV     RV +E A  V  +   EG G+AGEEGG G +  + A    GGA DP+EV A + DEEE L RGA
Subjt:  FFGEEAGGEGAISVRVKVSAGGVE---ARVVTEMGRRVREETAVRVVAVKRREGRGVAGEEGGGGRVLRAVA---AGGAFDPNEVAASISDEEEALGRGA

Query:  KTEVDEVLAGAGGGAGDERGFESG
        + +  +VL GAGGG GD  G   G
Subjt:  KTEVDEVLAGAGGGAGDERGFESG

KAF7827865.1 glycine-rich cell wall structural protein 1.0-like [Senna tora]5.4e-2054.17Show/hide
Query:  EEAGGEGAISVRVKVSAGGVEARVVTEM-GRRVREETAVRVVAVKRREGRGVAGEEGGGGRVLRAVAAGGAFDPNEVAASISDEEEALGRGAKTEVDEVL
        EE  G+G + V + VS   V+  +VT + G RV +E A RVVA+   E  GVAGEEGG G  + AVAAGGA DP+E+AA + DEEEAL R A +E+DEVL
Subjt:  EEAGGEGAISVRVKVSAGGVEARVVTEM-GRRVREETAVRVVAVKRREGRGVAGEEGGGGRVLRAVAAGGAFDPNEVAASISDEEEALGRGAKTEVDEVL

Query:  AGAGGGAGDERGFESGVRARGEGEGGEEEGEAVGVGGEGLGRGG
        AGAGGGAGDE GFE G    G        GE V VGGE +G  G
Subjt:  AGAGGGAGDERGFESGVRARGEGEGGEEEGEAVGVGGEGLGRGG

KDO70110.1 hypothetical protein CISIN_1g029800mg [Citrus sinensis]1.6e-0848.59Show/hide
Query:  GVEARVVTEMGRRVREETAVRVVAVKRREGRGVAGEEGGGGRVLRAVAAGGAFDPNEVAASISDEEEALGRGAKTEVDEVLAGAGGGAGDERGFESGVRA
        GV ARVV  +G    E     V AV  REG GVAGE+GG G    AVAAG A DP+EVAA I +EEE L RGA+ E DEVLAGAGG AG +  FE     
Subjt:  GVEARVVTEMGRRVREETAVRVVAVKRREGRGVAGEEGGGGRVLRAVAAGGAFDPNEVAASISDEEEALGRGAKTEVDEVLAGAGGGAGDERGFESGVRA

Query:  RGEGEGGEEEGEAVGVGGEGLGRGGEGGFMEEGELQIVGGGG
            E GE + +         G GG   F+E+ E +I  GGG
Subjt:  RGEGEGGEEEGEAVGVGGEGLGRGGEGGFMEEGELQIVGGGG

XP_011468691.1 PREDICTED: glycine-rich cell wall structural protein 1.0-like [Fragaria vesca subsp. vesca]2.0e-0654.44Show/hide
Query:  GVAGEEGGGGRVLRAVAAGGAFDPNEVAASISDEEEALGRGAKTEVDEVLAGAGGGAGDERGFESGVRARGEGEGGEEEGEAVGVG-GEG
        GVAGE+GG G    A  AGGA +P+EV A + DEEE L RGA+ EVDEVLAGA GGA D+ G   G    G   GG      +GVG GEG
Subjt:  GVAGEEGGGGRVLRAVAAGGAFDPNEVAASISDEEEALGRGAKTEVDEVLAGAGGGAGDERGFESGVRARGEGEGGEEEGEAVGVG-GEG

TrEMBL top hitse value%identityAlignment
A0A067FVC2 Uncharacterized protein7.9e-0948.59Show/hide
Query:  GVEARVVTEMGRRVREETAVRVVAVKRREGRGVAGEEGGGGRVLRAVAAGGAFDPNEVAASISDEEEALGRGAKTEVDEVLAGAGGGAGDERGFESGVRA
        GV ARVV  +G    E     V AV  REG GVAGE+GG G    AVAAG A DP+EVAA I +EEE L RGA+ E DEVLAGAGG AG +  FE     
Subjt:  GVEARVVTEMGRRVREETAVRVVAVKRREGRGVAGEEGGGGRVLRAVAAGGAFDPNEVAASISDEEEALGRGAKTEVDEVLAGAGGGAGDERGFESGVRA

Query:  RGEGEGGEEEGEAVGVGGEGLGRGGEGGFMEEGELQIVGGGG
            E GE + +         G GG   F+E+ E +I  GGG
Subjt:  RGEGEGGEEEGEAVGVGGEGLGRGGEGGFMEEGELQIVGGGG

A0A1D1YVI8 Uncharacterized protein (Fragment)4.2e-1055.32Show/hide
Query:  LQCGGFFGEEAGGEGAISVRVKVSAGGVEARVVTEMGR---RVREETAVRVVAVKRREGRGVAGEEGGGGRVLRAVAAGGAFDPNEVAASISDE
        ++ GG  GEEAGG G + VRV V+AG V+A       R   RVR ETA+ VVAV+  EG GVAGEEGG  RV  A AA GA  P+EVAA + DE
Subjt:  LQCGGFFGEEAGGEGAISVRVKVSAGGVEARVVTEMGR---RVREETAVRVVAVKRREGRGVAGEEGGGGRVLRAVAAGGAFDPNEVAASISDE

A0A2H5P4P8 Uncharacterized protein7.9e-0948.59Show/hide
Query:  GVEARVVTEMGRRVREETAVRVVAVKRREGRGVAGEEGGGGRVLRAVAAGGAFDPNEVAASISDEEEALGRGAKTEVDEVLAGAGGGAGDERGFESGVRA
        GV ARVV  +G    E     V AV  REG GVAGE+GG G    AVAAG A DP+EVAA I +EEE L RGA+ E DEVLAGAGG AG +  FE     
Subjt:  GVEARVVTEMGRRVREETAVRVVAVKRREGRGVAGEEGGGGRVLRAVAAGGAFDPNEVAASISDEEEALGRGAKTEVDEVLAGAGGGAGDERGFESGVRA

Query:  RGEGEGGEEEGEAVGVGGEGLGRGGEGGFMEEGELQIVGGGG
            E GE + +         G GG   F+E+ E +I  GGG
Subjt:  RGEGEGGEEEGEAVGVGGEGLGRGGEGGFMEEGELQIVGGGG

A0A5N6L4M9 Uncharacterized protein3.8e-1150Show/hide
Query:  FFGEEAGGEGAISVRVKVSAGGVE---ARVVTEMGRRVREETAVRVVAVKRREGRGVAGEEGGGGRVLRAVA---AGGAFDPNEVAASISDEEEALGRGA
        F GEEA G+GA+SV V V+A GVE   A VV     RV +E A  V  +   EG G+AGEEGG G +  + A    GGA DP+EV A + DEEE L RGA
Subjt:  FFGEEAGGEGAISVRVKVSAGGVE---ARVVTEMGRRVREETAVRVVAVKRREGRGVAGEEGGGGRVLRAVA---AGGAFDPNEVAASISDEEEALGRGA

Query:  KTEVDEVLAGAGGGAGDERGFESG
        + +  +VL GAGGG GD  G   G
Subjt:  KTEVDEVLAGAGGGAGDERGFESG

A0A5N6R0R7 Uncharacterized protein9.1e-0549.5Show/hide
Query:  FFGEEAGGEGAISVRVKVSAGGVE---ARVVTEMGRRVREETAVRVVAVKRREGRGVAGEEGGGGRVLRAVA---AGGAFDPNEVAASISDEEEALGRGA
        F GEEA  +GAI V V V+A GVE   A VV     +V +E    V AV   EG GVAGEEGG G V  + A    GGA DP+EV A +  EEE L  GA
Subjt:  FFGEEAGGEGAISVRVKVSAGGVE---ARVVTEMGRRVREETAVRVVAVKRREGRGVAGEEGGGGRVLRAVA---AGGAFDPNEVAASISDEEEALGRGA

Query:  K
        +
Subjt:  K

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTCGGATCCAGAAAGCGTCTTCAATGTGGTGGTTTCTTTGGAGAAGAAGCCGGAGGAGAGGGAGCCATCAGCGTAAGAGTAAAGGTATCGGCAGGGGGAGTGGA
GGCGCGTGTGGTTACAGAGATGGGAAGGCGCGTGAGGGAGGAGACGGCAGTGAGGGTCGTAGCAGTGAAAAGGAGAGAAGGAAGAGGAGTGGCGGGGGAGGAAGGCGGAG
GAGGGAGGGTGTTGAGAGCAGTTGCGGCAGGCGGAGCATTTGACCCAAACGAGGTCGCTGCCAGTATCAGCGACGAGGAGGAGGCTTTGGGGAGGGGTGCCAAGACGGAG
GTCGACGAAGTATTGGCCGGAGCCGGTGGAGGCGCCGGAGATGAGAGGGGATTTGAGAGTGGGGTTAGGGCGAGGGGGGAGGGGGAGGGCGGAGAAGAGGAGGGAGAGGC
GGTGGGTGTCGGAGGAGAGGGCTTGGGAAGGGGAGGAGAAGGGGGTTTTATGGAGGAGGGGGAGCTTCAGATAGTCGGCGGTGGCGGCATTGGCATTGGAGAGTTGTGTG
AGAGAGAAGAGAAGAAGAATGAGATGGAAGAAGGGGGAAATGGAGAGCGTTGTTGGTTGCATTTTGGATTTGGAGACAATACTGAAATGCGTAAAACTAAGAAAACACGG
ATGAGGAGGGAACAAATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTTCGGATCCAGAAAGCGTCTTCAATGTGGTGGTTTCTTTGGAGAAGAAGCCGGAGGAGAGGGAGCCATCAGCGTAAGAGTAAAGGTATCGGCAGGGGGAGTGGA
GGCGCGTGTGGTTACAGAGATGGGAAGGCGCGTGAGGGAGGAGACGGCAGTGAGGGTCGTAGCAGTGAAAAGGAGAGAAGGAAGAGGAGTGGCGGGGGAGGAAGGCGGAG
GAGGGAGGGTGTTGAGAGCAGTTGCGGCAGGCGGAGCATTTGACCCAAACGAGGTCGCTGCCAGTATCAGCGACGAGGAGGAGGCTTTGGGGAGGGGTGCCAAGACGGAG
GTCGACGAAGTATTGGCCGGAGCCGGTGGAGGCGCCGGAGATGAGAGGGGATTTGAGAGTGGGGTTAGGGCGAGGGGGGAGGGGGAGGGCGGAGAAGAGGAGGGAGAGGC
GGTGGGTGTCGGAGGAGAGGGCTTGGGAAGGGGAGGAGAAGGGGGTTTTATGGAGGAGGGGGAGCTTCAGATAGTCGGCGGTGGCGGCATTGGCATTGGAGAGTTGTGTG
AGAGAGAAGAGAAGAAGAATGAGATGGAAGAAGGGGGAAATGGAGAGCGTTGTTGGTTGCATTTTGGATTTGGAGACAATACTGAAATGCGTAAAACTAAGAAAACACGG
ATGAGGAGGGAACAAATGTGATTCTTCTTTCAATTTTTGGGCTCTCTTTTGGGCCCAATTCATCAAATTTCAATTTTCATTTTACTTAAATATTTTCTATTAAACTTCTA
AATTGTCCTAAGTGAATCAATTAATCTAAACCTTTATTAAGACTCTGCCGTAAATGTCTAGTTTTAATGCCTAACTGCTTCATTAAAAAAAATAGAAAAAAAAACAGATT
TTTTTAGAAACATATTTTAAATTTTAGAAACAAAAAAACAGAAATATGAAACAAAACAATTTCTTAGAAAAATGAAAACGAGAACAAGAAACAAAATAGTCACTAAACGA
AGTTTTATTTATTTAAAAAATTATGGTTGTTTTAGTATAACTATCCTATTTCATAACTCGACACTTTGAATTCTTAATCAAATTCTAAAAACATAAATAACTTTTTAAAC
CCAC
Protein sequenceShow/hide protein sequence
MDFGSRKRLQCGGFFGEEAGGEGAISVRVKVSAGGVEARVVTEMGRRVREETAVRVVAVKRREGRGVAGEEGGGGRVLRAVAAGGAFDPNEVAASISDEEEALGRGAKTE
VDEVLAGAGGGAGDERGFESGVRARGEGEGGEEEGEAVGVGGEGLGRGGEGGFMEEGELQIVGGGGIGIGELCEREEKKNEMEEGGNGERCWLHFGFGDNTEMRKTKKTR
MRREQM