; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc01G06070 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G06070
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionTranscription factor CYCLOIDEA
Genome locationClcChr01:5797194..5798147
RNA-Seq ExpressionClc01G06070
SyntenyClc01G06070
Gene Ontology termsGO:2000032 - regulation of secondary shoot formation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR005333 - Transcription factor, TCP
IPR017887 - Transcription factor TCP subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN51554.1 hypothetical protein Csa_008919 [Cucumis sativus]1.0e-8870.19Show/hide
Query:  QQEQYEDQ-LINSYDD---LHFPHPFLDDDDLFLSHFLSQQQQQQQLFEQEEKQDHEVDETTRKMKTKTKKKKVSGGNSSRKNGRSCTKRRGKKDRHSKI
        QQ+  EDQ LINSYDD    +FPHPFLDDDDLFLSHFLS   QQQQ FEQ   +D ++DETT+KMK   KKKK+ G +SSRKNG + TKRRGKKDRHSKI
Subjt:  QQEQYEDQ-LINSYDD---LHFPHPFLDDDDLFLSHFLSQQQQQQQLFEQEEKQDHEVDETTRKMKTKTKKKKVSGGNSSRKNGRSCTKRRGKKDRHSKI

Query:  YTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINN-------------QDQEQE
        YTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKAS+TIEWLLLNSNSAIKDLKQ YF   S        SGQSSEVVSEIN+             Q+Q+QE
Subjt:  YTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINN-------------QDQEQE

Query:  EAGGFTGSFKDK-KGRQLRTVGREARDRARARARQRTLLKNTSFLQPPINLD-----HHLSGNN------NNNNNTYLD-YPTFSCPN-SIFLPSPLSLP
        +   FTG FKDK K R LRTV REARDRARARARQRTLLKNT    PPI         HLSGNN      NNNNNTYLD YPTFSCP+ SIFLPSPL LP
Subjt:  EAGGFTGSFKDK-KGRQLRTVGREARDRARARARQRTLLKNTSFLQPPINLD-----HHLSGNN------NNNNNTYLD-YPTFSCPN-SIFLPSPLSLP

Query:  YSFSDSTLLKLP
        YSF+DSTLLKLP
Subjt:  YSFSDSTLLKLP

TYK00281.1 transcription factor CYCLOIDEA [Cucumis melo var. makuwa]1.8e-8567.71Show/hide
Query:  YQQEQYEDQ--LINSYD--DLH-FPHPFLDDDDLFLSHFLSQQQQQQQLFEQEEKQDHEVDETTRKMKTKTKKKKVSGGNSSRKNGRSCTKRRGKKDRHS
        +QQ+Q+ +   LINSYD  DLH FPHPFLDDDDLFLSHFLS   QQQQ FEQ   +D ++DETT+KMK   KKKK+ G +SSR NG + TKRRGKKDRHS
Subjt:  YQQEQYEDQ--LINSYD--DLH-FPHPFLDDDDLFLSHFLSQQQQQQQLFEQEEKQDHEVDETTRKMKTKTKKKKVSGGNSSRKNGRSCTKRRGKKDRHS

Query:  KIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEIN--------------NQDQ
        KIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKAS+TIEWLLLNSNSAIKDLKQ YF   S        SGQSSEVVSEIN              +Q Q
Subjt:  KIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEIN--------------NQDQ

Query:  EQEEAGGFTGSFKDK-KGRQLRTVGREARDRARARARQRTLLKNTSFLQPPINLD-----HHLSG----------NNNNNNNTYLD-YPTFSCP-NSIFL
        +QE+   FTG FKDK K R LRT  REARDRARARARQRTLLKNT    PPI         HLSG          NNNNNNNTYLD YPTFSCP +S+FL
Subjt:  EQEEAGGFTGSFKDK-KGRQLRTVGREARDRARARARQRTLLKNTSFLQPPINLD-----HHLSG----------NNNNNNNTYLD-YPTFSCP-NSIFL

Query:  PSPLSLPYSFSDSTLLKLP
        PSPL LPYSFSDST+LKLP
Subjt:  PSPLSLPYSFSDSTLLKLP

XP_011656248.2 transcription factor TCP12 [Cucumis sativus]4.4e-10069.43Show/hide
Query:  MMMMKQQDIFCCNNNITEINQIVLDHLNPSTSS--SMYQQEQYEDQ-LINSYDD---LHFPHPFLDDDDLFLSHFLSQQQQQQQLFEQEEKQDHEVDETT
        MMMMK QD+F CN NITEIN I+L+ LNPS SS     QQ+  EDQ LINSYDD    +FPHPFLDDDDLFLSHFLS   QQQQ FEQ   +D ++DETT
Subjt:  MMMMKQQDIFCCNNNITEINQIVLDHLNPSTSS--SMYQQEQYEDQ-LINSYDD---LHFPHPFLDDDDLFLSHFLSQQQQQQQLFEQEEKQDHEVDETT

Query:  RKMKTKTKKKKVSGGNSSRKNGRSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGV
        +KMK   KKKK+ G +SSRKNG + TKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKAS+TIEWLLLNSNSAIKDLKQ YF   S  
Subjt:  RKMKTKTKKKKVSGGNSSRKNGRSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGV

Query:  SHGSVYSGQSSEVVSEINN-------------QDQEQEEAGGFTGSFKDK-KGRQLRTVGREARDRARARARQRTLLKNTSFLQPPINLD-----HHLSG
              SGQSSEVVSEIN+             Q+Q+QE+   FTG FKDK K R LRTV REARDRARARARQRTLLKNT    PPI         HLSG
Subjt:  SHGSVYSGQSSEVVSEINN-------------QDQEQEEAGGFTGSFKDK-KGRQLRTVGREARDRARARARQRTLLKNTSFLQPPINLD-----HHLSG

Query:  NN------NNNNNTYLD-YPTFSCPN-SIFLPSPLSLPYSFSDSTLLKLP
        NN      NNNNNTYLD YPTFSCP+ SIFLPSPL LPYSF+DSTLLKLP
Subjt:  NN------NNNNNTYLD-YPTFSCPN-SIFLPSPLSLPYSFSDSTLLKLP

XP_022928828.1 transcription factor CYCLOIDEA-like [Cucurbita moschata]8.6e-5655.82Show/hide
Query:  EQYEDQLINSYDDLHFPHPFLDDDDLFLSHFLSQQQQQQQ---------LFEQEEKQ----------DHEVD---ETTRKMKTKTKKKKVSGGNSSRKNG
        +Q+E+   +SY  LHFPHPFLDDDDLFL+HFLSQQQ+QQQ           EQ+E+Q          DH+ +   +  R ++ K KKKK S  NS+RKNG
Subjt:  EQYEDQLINSYDDLHFPHPFLDDDDLFLSHFLSQQQQQQQ---------LFEQEEKQ----------DHEVD---ETTRKMKTKTKKKKVSGGNSSRKNG

Query:  RSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQ
         S TKR GKKDRHSKI TAQGPRDRRMRLSLQIARKFFDLQDMLGFDKAS+TIEWLL +SNSAIK L     +NNSGVSHGS  SG SSEVVS       
Subjt:  RSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQ

Query:  EQEEAGGFTGSFKDKKGRQLRTVGREARDRARARARQRTLLKNTSFLQPPINLDHHLSGNNNNNNNTYLDYPTFSCPNSIFLPSPLSLPYSF
         +++AGG  G+ K KKGRQL+T+GRE+R RARARAR+RT+LK +   QP     H+L     N++ T+L+     CP        LS  ++F
Subjt:  EQEEAGGFTGSFKDKKGRQLRTVGREARDRARARARQRTLLKNTSFLQPPINLDHHLSGNNNNNNNTYLDYPTFSCPNSIFLPSPLSLPYSF

XP_023550518.1 transcription factor CYCLOIDEA-like [Cucurbita pepo subsp. pepo]1.0e-5656.32Show/hide
Query:  LHFPHPFLDDDDLFLSHFLSQQQQQQQLF--------EQEEKQDHE------------VDETTRKMKTKTKKKKVSGGNSSRKNGRSCTKRRGKKDRHSK
        LHFPHPFLDD+DLFL+HFLSQQQQQQQ          EQ+++Q+ E             ++  R+     KKKK S  NS+RKNG S TKR GKKDRHSK
Subjt:  LHFPHPFLDDDDLFLSHFLSQQQQQQQLF--------EQEEKQDHE------------VDETTRKMKTKTKKKKVSGGNSSRKNGRSCTKRRGKKDRHSK

Query:  IYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQEEAGGFTGSFKDK
        I TAQGPRDRRMRLSLQIARKFFDLQDMLGFDKAS+TIEWLL +SNSAIK LK    +NNSGVSHGS  SG SSEVVS        +++AGG  G+ K K
Subjt:  IYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQEEAGGFTGSFKDK

Query:  KGRQLRTVGREARDRARARARQRTLLKNTSFLQPPINLDHHLSGNNNNNNNTYLDYPTFSCPNSIFLPSPLSLPYSF
        KGRQL+T+GRE+R RARARAR+RT+LK +     PI++  H      N++ T+L+     CP        LS  ++F
Subjt:  KGRQLRTVGREARDRARARARQRTLLKNTSFLQPPINLDHHLSGNNNNNNNTYLDYPTFSCPNSIFLPSPLSLPYSF

TrEMBL top hitse value%identityAlignment
A0A0A0KRR2 TCP domain-containing protein4.9e-8970.19Show/hide
Query:  QQEQYEDQ-LINSYDD---LHFPHPFLDDDDLFLSHFLSQQQQQQQLFEQEEKQDHEVDETTRKMKTKTKKKKVSGGNSSRKNGRSCTKRRGKKDRHSKI
        QQ+  EDQ LINSYDD    +FPHPFLDDDDLFLSHFLS   QQQQ FEQ   +D ++DETT+KMK   KKKK+ G +SSRKNG + TKRRGKKDRHSKI
Subjt:  QQEQYEDQ-LINSYDD---LHFPHPFLDDDDLFLSHFLSQQQQQQQLFEQEEKQDHEVDETTRKMKTKTKKKKVSGGNSSRKNGRSCTKRRGKKDRHSKI

Query:  YTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINN-------------QDQEQE
        YTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKAS+TIEWLLLNSNSAIKDLKQ YF   S        SGQSSEVVSEIN+             Q+Q+QE
Subjt:  YTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINN-------------QDQEQE

Query:  EAGGFTGSFKDK-KGRQLRTVGREARDRARARARQRTLLKNTSFLQPPINLD-----HHLSGNN------NNNNNTYLD-YPTFSCPN-SIFLPSPLSLP
        +   FTG FKDK K R LRTV REARDRARARARQRTLLKNT    PPI         HLSGNN      NNNNNTYLD YPTFSCP+ SIFLPSPL LP
Subjt:  EAGGFTGSFKDK-KGRQLRTVGREARDRARARARQRTLLKNTSFLQPPINLD-----HHLSGNN------NNNNNTYLD-YPTFSCPN-SIFLPSPLSLP

Query:  YSFSDSTLLKLP
        YSF+DSTLLKLP
Subjt:  YSFSDSTLLKLP

A0A5D3BKD8 Transcription factor CYCLOIDEA8.6e-8667.71Show/hide
Query:  YQQEQYEDQ--LINSYD--DLH-FPHPFLDDDDLFLSHFLSQQQQQQQLFEQEEKQDHEVDETTRKMKTKTKKKKVSGGNSSRKNGRSCTKRRGKKDRHS
        +QQ+Q+ +   LINSYD  DLH FPHPFLDDDDLFLSHFLS   QQQQ FEQ   +D ++DETT+KMK   KKKK+ G +SSR NG + TKRRGKKDRHS
Subjt:  YQQEQYEDQ--LINSYD--DLH-FPHPFLDDDDLFLSHFLSQQQQQQQLFEQEEKQDHEVDETTRKMKTKTKKKKVSGGNSSRKNGRSCTKRRGKKDRHS

Query:  KIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEIN--------------NQDQ
        KIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKAS+TIEWLLLNSNSAIKDLKQ YF   S        SGQSSEVVSEIN              +Q Q
Subjt:  KIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEIN--------------NQDQ

Query:  EQEEAGGFTGSFKDK-KGRQLRTVGREARDRARARARQRTLLKNTSFLQPPINLD-----HHLSG----------NNNNNNNTYLD-YPTFSCP-NSIFL
        +QE+   FTG FKDK K R LRT  REARDRARARARQRTLLKNT    PPI         HLSG          NNNNNNNTYLD YPTFSCP +S+FL
Subjt:  EQEEAGGFTGSFKDK-KGRQLRTVGREARDRARARARQRTLLKNTSFLQPPINLD-----HHLSG----------NNNNNNNTYLD-YPTFSCP-NSIFL

Query:  PSPLSLPYSFSDSTLLKLP
        PSPL LPYSFSDST+LKLP
Subjt:  PSPLSLPYSFSDSTLLKLP

A0A6J1EQ72 transcription factor CYCLOIDEA-like4.2e-5655.82Show/hide
Query:  EQYEDQLINSYDDLHFPHPFLDDDDLFLSHFLSQQQQQQQ---------LFEQEEKQ----------DHEVD---ETTRKMKTKTKKKKVSGGNSSRKNG
        +Q+E+   +SY  LHFPHPFLDDDDLFL+HFLSQQQ+QQQ           EQ+E+Q          DH+ +   +  R ++ K KKKK S  NS+RKNG
Subjt:  EQYEDQLINSYDDLHFPHPFLDDDDLFLSHFLSQQQQQQQ---------LFEQEEKQ----------DHEVD---ETTRKMKTKTKKKKVSGGNSSRKNG

Query:  RSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQ
         S TKR GKKDRHSKI TAQGPRDRRMRLSLQIARKFFDLQDMLGFDKAS+TIEWLL +SNSAIK L     +NNSGVSHGS  SG SSEVVS       
Subjt:  RSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQ

Query:  EQEEAGGFTGSFKDKKGRQLRTVGREARDRARARARQRTLLKNTSFLQPPINLDHHLSGNNNNNNNTYLDYPTFSCPNSIFLPSPLSLPYSF
         +++AGG  G+ K KKGRQL+T+GRE+R RARARAR+RT+LK +   QP     H+L     N++ T+L+     CP        LS  ++F
Subjt:  EQEEAGGFTGSFKDKKGRQLRTVGREARDRARARARQRTLLKNTSFLQPPINLDHHLSGNNNNNNNTYLDYPTFSCPNSIFLPSPLSLPYSF

A0A6J1HX83 transcription factor TCP12-like1.8e-5155.88Show/hide
Query:  LHFPHPFLDDDDLFLSHFLSQQQQ----------QQQLFEQEEKQDHEVDETT-----RKMKTKTKKKKVSGGNSSRKNGRSCTKRRGKKDRHSKIYTAQ
        LHFPHPFL DDDLFL+H LSQQQQ          Q+Q  E+E+   H+  + +     R ++ K KKKK    NS+RKNG S TKR  KKDRHSKI TAQ
Subjt:  LHFPHPFLDDDDLFLSHFLSQQQQ----------QQQLFEQEEKQDHEVDETT-----RKMKTKTKKKKVSGGNSSRKNGRSCTKRRGKKDRHSKIYTAQ

Query:  GPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQEEAGGFTGSFKDKKGRQL
        GPRDRRMRLSLQIARKFFDLQDMLGFDKAS+TIEWLL +SNSAIK LK    +NNSGVSHGS  SG SSEVVS        +++AGG  G+ K KKGRQL
Subjt:  GPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQEEAGGFTGSFKDKKGRQL

Query:  RTVGREARDRARARARQRTLLKNTSFLQPPINLDHHLSGNNNNNNNTYLDYPTFSCPNSIFLPSPLSLPYSF
        +T+GRE+R RARARAR+RT+LK +     PI++  H      N++ T+L+     CP        LS  ++F
Subjt:  RTVGREARDRARARARQRTLLKNTSFLQPPINLDHHLSGNNNNNNNTYLDYPTFSCPNSIFLPSPLSLPYSF

A0A6J1IDD5 transcription factor CYCLOIDEA-like1.7e-4955.4Show/hide
Query:  MKQQDIFCCNNNITEINQIVLDHLNPSTSSSMYQQEQYEDQLINSYDDLHFPHPFLDDDDLFLSHFLSQQQ---------QQQQLFEQEEKQDHEVDETT
        M   ++F  NNN T+ N I L H           QEQ+E+ L      LHFPHPFLD DDLFL+H LS QQ         +Q+Q  E E  Q  +  E  
Subjt:  MKQQDIFCCNNNITEINQIVLDHLNPSTSSSMYQQEQYEDQLINSYDDLHFPHPFLDDDDLFLSHFLSQQQ---------QQQQLFEQEEKQDHEVDETT

Query:  RKMKTKTKKKKVSGGNSSRKNGRSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGV
        R    K KKKK SG   +RKNG S  K+ GKKDRHSKIYTAQGPRDRR+RLSLQIARKFFDLQDMLGFDKAS TIEWLL NS SAIKDL+ +  +NNSG 
Subjt:  RKMKTKTKKKKVSGGNSSRKNGRSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGV

Query:  SHGSVYSGQSSEVVSEI---NNQDQEQEEAGGFTGSFKDKKGRQLRTVGREARDRARARARQRTLLKNTSFLQPPINL
         +GSV  G S+E VSE+   NN      +   F  + K K+ R LR VGRE+RDRARARARQRT+LK T   QP  NL
Subjt:  SHGSVYSGQSSEVVSEI---NNQDQEQEEAGGFTGSFKDKKGRQLRTVGREARDRARARARQRTLLKNTSFLQPPINL

SwissProt top hitse value%identityAlignment
A0AQW4 Transcription factor TCP127.9e-2040.48Show/hide
Query:  HFPHPFLDDDDLFLSHFLSQQQQQQQLFEQEEKQDHEVD---ETTRKMKTKTKKKK-VSGGNSSRKNGRSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQ
        H+  P       FL  F       Q L +Q++   + V+   +  +K++ K K +K V G  S     R   K   K+DRHSKI TAQGPRDRRMRLSLQ
Subjt:  HFPHPFLDDDDLFLSHFLSQQQQQQQLFEQEEKQDHEVD---ETTRKMKTKTKKKK-VSGGNSSRKNGRSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQ

Query:  IARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQEEAGGFTGSFKDKKGRQLRTVGREARDRAR
        IARKFFDLQDMLGFDKAS+TIEWL   S ++IK LK+   ++  G        G+       +   ++E++E      S +  K  +     +E+R+RAR
Subjt:  IARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQEEAGGFTGSFKDKKGRQLRTVGREARDRAR

Query:  ARARQRTLLK
         RAR+RT+ K
Subjt:  ARARQRTLLK

O49250 Transcription factor CYCLOIDEA4.2e-2148.91Show/hide
Query:  TKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQE
        TK+  KKDRHSKIYT+QGPRDRR+RLS+ IARKFFDLQ+MLGFDK S+T++WLL  S +AIK+L Q    + S  S+ S       EVVS  +    +  
Subjt:  TKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQE

Query:  EAGGFTGSFKDKKGRQL-RTVGREARDRARARARQRT
        +      + K K+     +   +E+R +ARARAR+RT
Subjt:  EAGGFTGSFKDKKGRQL-RTVGREARDRARARARQRT

Q9SBV6 Transcription factor CYCLOIDEA (Fragment)4.2e-2148.91Show/hide
Query:  TKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQE
        TK+  KKDRHSKIYT+QGPRDRR+RLS+ IARKFFDLQ+MLGFDK S+T++WLL  S +AIK+L Q    + S  S+ S       EVVS  +    +  
Subjt:  TKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQE

Query:  EAGGFTGSFKDKKGRQL-RTVGREARDRARARARQRT
        +      + K K+     +   +E+R +ARARAR+RT
Subjt:  EAGGFTGSFKDKKGRQL-RTVGREARDRARARARQRT

Q9SBV9 Transcription factor CYCLOIDEA (Fragment)5.5e-2148.18Show/hide
Query:  TKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQE
        TK+  KKDRHSKIYT+QGPRDRR+RLS+ IARKFFDLQ+MLGFDK S+T++WLL  S +A+K+L Q    + S  S+ S       EVVS  +    +  
Subjt:  TKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQE

Query:  EAGGFTGSFKDKKGRQL-RTVGREARDRARARARQRT
        +      + K K+     +   +E+R +ARARAR+RT
Subjt:  EAGGFTGSFKDKKGRQL-RTVGREARDRARARARQRT

Q9SNW8 Transcription factor DICHOTOMA3.0e-1950Show/hide
Query:  KRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVS-EINNQDQEQE
        K   KKDRHSKI   QGPRDRR+RLS+ IARKFFDLQ+MLGFDK S+T++WLL  S  AIK+L Q+  S+ S +S+    S    EV+S ++      + 
Subjt:  KRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVS-EINNQDQEQE

Query:  EAGGFTGSFKDKKGRQLRTVGREARDRARARARQRT
        +A     S K K GR    + +E+R +ARARAR+RT
Subjt:  EAGGFTGSFKDKKGRQLRTVGREARDRARARARQRT

Arabidopsis top hitse value%identityAlignment
AT1G67260.1 TCP family transcription factor4.4e-1843.92Show/hide
Query:  KRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSG-QSSEVVSEINNQDQ---
        K+  KKDRHSKI TAQG RDRR+RLS+ IAR+FFDLQDMLGFDKAS+T++WLL  S  AIK++ Q    NN     G++    +  E   E +N D+   
Subjt:  KRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSG-QSSEVVSEINNQDQ---

Query:  --------EQEEAGGFTGSFKDKKGRQLRTVGREARD-RARARARQRT
                E+E     T +   KK  +LR +  +    +AR +A++RT
Subjt:  --------EQEEAGGFTGSFKDKKGRQLRTVGREARD-RARARARQRT

AT1G67260.2 TCP family transcription factor4.4e-1843.92Show/hide
Query:  KRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSG-QSSEVVSEINNQDQ---
        K+  KKDRHSKI TAQG RDRR+RLS+ IAR+FFDLQDMLGFDKAS+T++WLL  S  AIK++ Q    NN     G++    +  E   E +N D+   
Subjt:  KRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSG-QSSEVVSEINNQDQ---

Query:  --------EQEEAGGFTGSFKDKKGRQLRTVGREARD-RARARARQRT
                E+E     T +   KK  +LR +  +    +AR +A++RT
Subjt:  --------EQEEAGGFTGSFKDKKGRQLRTVGREARD-RARARARQRT

AT1G68800.1 TCP domain protein 125.6e-2140.48Show/hide
Query:  HFPHPFLDDDDLFLSHFLSQQQQQQQLFEQEEKQDHEVD---ETTRKMKTKTKKKK-VSGGNSSRKNGRSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQ
        H+  P       FL  F       Q L +Q++   + V+   +  +K++ K K +K V G  S     R   K   K+DRHSKI TAQGPRDRRMRLSLQ
Subjt:  HFPHPFLDDDDLFLSHFLSQQQQQQQLFEQEEKQDHEVD---ETTRKMKTKTKKKK-VSGGNSSRKNGRSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQ

Query:  IARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQEEAGGFTGSFKDKKGRQLRTVGREARDRAR
        IARKFFDLQDMLGFDKAS+TIEWL   S ++IK LK+   ++  G        G+       +   ++E++E      S +  K  +     +E+R+RAR
Subjt:  IARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQEEAGGFTGSFKDKKGRQLRTVGREARDRAR

Query:  ARARQRTLLK
         RAR+RT+ K
Subjt:  ARARQRTLLK

AT3G18550.1 TCP family transcription factor1.7e-1434.52Show/hide
Query:  KRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQ--
        K+  + DRHSKI TA+G RDRRMRLSL +A++ F LQDMLGFDKAS+T+EWLL  +   I  +  T         HG   SG  S +   + + D     
Subjt:  KRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQ--

Query:  ---------EEAGGFTG------------SFKDKKGRQ------LRTVGREARDRARARARQRTL------LKNTSFLQPPINLDHHLSGNNNNNNN
                 ++ G  T             S + K+ R       L+ + +E R +AR RA+ RT+      +K  S L   +  D H  G    NNN
Subjt:  ---------EEAGGFTG------------SFKDKKGRQ------LRTVGREARDRARARARQRTL------LKNTSFLQPPINLDHHLSGNNNNNNN

AT3G18550.2 TCP family transcription factor1.3e-1435.75Show/hide
Query:  KRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQ--
        K+  + DRHSKI TA+G RDRRMRLSL +A++ F LQDMLGFDKAS+T+EWLL  +   I  +  T         HG   SG  S + S   + D  +  
Subjt:  KRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQ--

Query:  -----EEAGGFTG------------SFKDKKGRQ------LRTVGREARDRARARARQRTL------LKNTSFLQPPINLDHHLSGNNNNNNN
             ++ G  T             S + K+ R       L+ + +E R +AR RA+ RT+      +K  S L   +  D H  G    NNN
Subjt:  -----EEAGGFTG------------SFKDKKGRQ------LRTVGREARDRARARARQRTL------LKNTSFLQPPINLDHHLSGNNNNNNN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATGATGAAACAACAAGATATATTTTGTTGTAACAACAACATCACTGAAATTAATCAAATTGTTTTAGATCATCTAAACCCTAGTACCTCCTCATCAATGTATCA
ACAAGAACAATATGAGGATCAGCTCATCAACTCATATGATGATCTACATTTCCCACATCCTTTTCTCGACGATGACGACCTATTTTTAAGCCACTTTTTATCACAACAGC
AGCAGCAACAACAACTCTTCGAACAAGAAGAAAAACAAGATCATGAGGTTGATGAAACAACGAGAAAGATGAAGACGAAGACGAAAAAGAAGAAAGTAAGCGGTGGTAAT
AGTAGTAGAAAAAATGGAAGGAGCTGCACAAAGAGAAGAGGGAAGAAGGACAGACATAGTAAGATCTACACAGCACAAGGCCCAAGAGACCGTAGAATGAGGCTGTCCCT
TCAAATTGCAAGGAAATTCTTCGACCTTCAAGACATGCTAGGCTTTGACAAAGCTAGCCAAACCATAGAGTGGCTTCTTCTTAACTCAAATTCAGCCATTAAAGATCTCA
AACAAACCTACTTCTCAAACAATAGTGGGGTTAGCCATGGGAGTGTTTATTCTGGCCAATCAAGTGAGGTTGTGTCAGAGATTAATAATCAAGATCAAGAACAAGAAGAA
GCTGGTGGTTTTACGGGCAGTTTCAAAGACAAAAAGGGCAGGCAATTACGTACAGTTGGTAGAGAGGCAAGGGATAGGGCAAGAGCTAGGGCAAGACAAAGAACACTCTT
GAAAAATACTTCATTCCTACAGCCTCCTATTAATTTGGATCATCATCTCTCAGGTAATAATAATAATAATAATAACACCTATCTTGATTATCCAACATTTTCTTGCCCTA
ATTCCATTTTCCTTCCCTCTCCACTTTCCTTACCCTACTCTTTTTCTGATTCCACATTACTCAAATTGCCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGATGATGAAACAACAAGATATATTTTGTTGTAACAACAACATCACTGAAATTAATCAAATTGTTTTAGATCATCTAAACCCTAGTACCTCCTCATCAATGTATCA
ACAAGAACAATATGAGGATCAGCTCATCAACTCATATGATGATCTACATTTCCCACATCCTTTTCTCGACGATGACGACCTATTTTTAAGCCACTTTTTATCACAACAGC
AGCAGCAACAACAACTCTTCGAACAAGAAGAAAAACAAGATCATGAGGTTGATGAAACAACGAGAAAGATGAAGACGAAGACGAAAAAGAAGAAAGTAAGCGGTGGTAAT
AGTAGTAGAAAAAATGGAAGGAGCTGCACAAAGAGAAGAGGGAAGAAGGACAGACATAGTAAGATCTACACAGCACAAGGCCCAAGAGACCGTAGAATGAGGCTGTCCCT
TCAAATTGCAAGGAAATTCTTCGACCTTCAAGACATGCTAGGCTTTGACAAAGCTAGCCAAACCATAGAGTGGCTTCTTCTTAACTCAAATTCAGCCATTAAAGATCTCA
AACAAACCTACTTCTCAAACAATAGTGGGGTTAGCCATGGGAGTGTTTATTCTGGCCAATCAAGTGAGGTTGTGTCAGAGATTAATAATCAAGATCAAGAACAAGAAGAA
GCTGGTGGTTTTACGGGCAGTTTCAAAGACAAAAAGGGCAGGCAATTACGTACAGTTGGTAGAGAGGCAAGGGATAGGGCAAGAGCTAGGGCAAGACAAAGAACACTCTT
GAAAAATACTTCATTCCTACAGCCTCCTATTAATTTGGATCATCATCTCTCAGGTAATAATAATAATAATAATAACACCTATCTTGATTATCCAACATTTTCTTGCCCTA
ATTCCATTTTCCTTCCCTCTCCACTTTCCTTACCCTACTCTTTTTCTGATTCCACATTACTCAAATTGCCCTAA
Protein sequenceShow/hide protein sequence
MMMMKQQDIFCCNNNITEINQIVLDHLNPSTSSSMYQQEQYEDQLINSYDDLHFPHPFLDDDDLFLSHFLSQQQQQQQLFEQEEKQDHEVDETTRKMKTKTKKKKVSGGN
SSRKNGRSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQEE
AGGFTGSFKDKKGRQLRTVGREARDRARARARQRTLLKNTSFLQPPINLDHHLSGNNNNNNNTYLDYPTFSCPNSIFLPSPLSLPYSFSDSTLLKLP