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Clc01G06080 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G06080
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionCLAVATA3/ESR (CLE)-related protein 12-like
Genome locationClcChr01:5818658..5819011
RNA-Seq ExpressionClc01G06080
SyntenyClc01G06080
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR039618 - CLAVATA3/ESR (CLE)-related protein 9/10/11/12/13


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3958485.1 hypothetical protein CMV_016625 [Castanea mollissima]4.8e-2051.59Show/hide
Query:  MTLKISNFLFTMLWISLLLLLLHELNIFKAK-MNHKPTPTITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPHRRPNRPPKHSHLAD-----TNVELAP-
        M LK+S  +F  LW+SLL+LL H+L  FK+K +N K   TIT+   S+  SNHPLITRKVL S+ DFTPF  H +  +  +     D      N+ + P 
Subjt:  MTLKISNFLFTMLWISLLLLLLHELNIFKAK-MNHKPTPTITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPHRRPNRPPKHSHLAD-----TNVELAP-

Query:  --ANDIDPRYGVEKRRVPTGPNPLHH
           ++IDPRYGVEKRRVPTGPNPLHH
Subjt:  --ANDIDPRYGVEKRRVPTGPNPLHH

KAG6601759.1 CLAVATA3/ESR (CLE)-related protein 12, partial [Cucurbita argyrosperma subsp. sororia]7.9e-3171.82Show/hide
Query:  MLWISLLLLLLHELNIFKAKMNHKPTPTITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPHRRPNRPPKHSHLADTNVELAP----ANDIDPRYGVEKRR
        MLWISLLL+LLH+LNIF AKMN K  P ITFSY  SSSSNHPL TRK L SKVDFTPFFPH +PNRP KHS  A   V+L P    A+D+DP YGVEKRR
Subjt:  MLWISLLLLLLHELNIFKAKMNHKPTPTITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPHRRPNRPPKHSHLADTNVELAP----ANDIDPRYGVEKRR

Query:  VPTGPNPLHH
        VP GPNPLH+
Subjt:  VPTGPNPLHH

KAG7032483.1 CLAVATA3/ESR (CLE)-related protein 12, partial [Cucurbita argyrosperma subsp. argyrosperma]8.7e-2268.89Show/hide
Query:  MNHKPTPTITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPHRRPNRPPKHSHLADTNVELAP----ANDIDPRYGVEKRRVPTGPNPLHH
        MN K  P ITFSY  SSSSNHPL TRK L SKVDFTPFFPH +PNRP KHS  A   V+L P    A+D+DP YGVEKRRVP GPNPLH+
Subjt:  MNHKPTPTITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPHRRPNRPPKHSHLADTNVELAP----ANDIDPRYGVEKRRVPTGPNPLHH

XP_022775823.1 CLAVATA3/ESR (CLE)-related protein 12-like [Durio zibethinus]1.5e-2156.1Show/hide
Query:  MTLKISNFLFTMLWISLLLLLLHELNIFKAKMNHKPTPTITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPH------RRPNRPPKHSHLADTNVELAPA
        M  K+S+ +FT+LW+SLLLLLLHE N FK K+N K T +ITF    SS S++PLI+RKV  SK DFTPF  H      + P    K S LAD        
Subjt:  MTLKISNFLFTMLWISLLLLLLHELNIFKAKMNHKPTPTITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPH------RRPNRPPKHSHLADTNVELAPA

Query:  NDIDPRYGVEKRRVPTGPNPLHH
         +IDPRYGVEKR VPTGPNPLHH
Subjt:  NDIDPRYGVEKRRVPTGPNPLHH

XP_023903065.1 CLAVATA3/ESR (CLE)-related protein 12 [Quercus suber]1.5e-2153.28Show/hide
Query:  MTLKISNFLFTMLWISLLLLLLHELNIFKAK-MNHKPTPTITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPHRRPNRPPKHSHL-ADTNVELAP---AN
        M LK+S  +F  LW+SLL+LL H+L  FK+K +N K   TIT+   S+  SNHPLITRKVL S+ DFTPF  H +  +  +  H+    N+ + P    +
Subjt:  MTLKISNFLFTMLWISLLLLLLHELNIFKAK-MNHKPTPTITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPHRRPNRPPKHSHL-ADTNVELAP---AN

Query:  DIDPRYGVEKRRVPTGPNPLHH
        +IDPRYGVEKRRVPTGPNPLHH
Subjt:  DIDPRYGVEKRRVPTGPNPLHH

TrEMBL top hitse value%identityAlignment
A0A0A0KPQ3 Uncharacterized protein1.1e-4687.29Show/hide
Query:  MTLKISNFLFTMLWISLLLLLLHELNIFKAKMNHKPTPTITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPHRRPNRPPKHSHLADTNVELAPA-NDIDP
        MTLKIS+FLFTMLWISLLLLLLHELNIFKAKMNH+PTPTITFSY  SSSSNHPLITRKVLTSKVDFTPFF HR PN+P KHSH  DTNV   PA +DIDP
Subjt:  MTLKISNFLFTMLWISLLLLLLHELNIFKAKMNHKPTPTITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPHRRPNRPPKHSHLADTNVELAPA-NDIDP

Query:  RYGVEKRRVPTGPNPLHH
        RYGVEKRRVPTGPNPLHH
Subjt:  RYGVEKRRVPTGPNPLHH

A0A2N9J7P0 Uncharacterized protein4.0e-2051.26Show/hide
Query:  LKISNFLFTMLWISLLLLLLHELNIFKAKMNHKPTPTITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPHRRPNRPPKHSH---LADTNVELAPA-NDID
        +K+S  +F  LW+SL++ L H+    K+K+N+K   T+T  YSS S  +HPLITRKVL SK DFTPF  H +  +  +  H     + +V+  PA ++ID
Subjt:  LKISNFLFTMLWISLLLLLLHELNIFKAKMNHKPTPTITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPHRRPNRPPKHSH---LADTNVELAPA-NDID

Query:  PRYGVEKRRVPTGPNPLHH
        PRYGVEKRRVPTGPNPLHH
Subjt:  PRYGVEKRRVPTGPNPLHH

A0A6J1BM88 CLAVATA3/ESR (CLE)-related protein 12-like8.8e-2053.39Show/hide
Query:  MTLKISNFLF-TMLWISLLLLLLHELNIFKAKMNHKPTPTITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPHRRPNRPPKHSHLADTNVELAPANDIDP
        M  K+S+ +F T+LW+SLL LLLHE + FK K+N +   +ITF    SS S +PLI+RKV+ SK DFTPF  H +  +  KHS       + A   +IDP
Subjt:  MTLKISNFLF-TMLWISLLLLLLHELNIFKAKMNHKPTPTITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPHRRPNRPPKHSHLADTNVELAPANDIDP

Query:  RYGVEKRRVPTGPNPLHH
        RYGVEKR VPTGPNPLHH
Subjt:  RYGVEKRRVPTGPNPLHH

A0A6P6BFB8 CLAVATA3/ESR (CLE)-related protein 12-like7.2e-2256.1Show/hide
Query:  MTLKISNFLFTMLWISLLLLLLHELNIFKAKMNHKPTPTITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPH------RRPNRPPKHSHLADTNVELAPA
        M  K+S+ +FT+LW+SLLLLLLHE N FK K+N K T +ITF    SS S++PLI+RKV  SK DFTPF  H      + P    K S LAD        
Subjt:  MTLKISNFLFTMLWISLLLLLLHELNIFKAKMNHKPTPTITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPH------RRPNRPPKHSHLADTNVELAPA

Query:  NDIDPRYGVEKRRVPTGPNPLHH
         +IDPRYGVEKR VPTGPNPLHH
Subjt:  NDIDPRYGVEKRRVPTGPNPLHH

A0A7N2KK79 Uncharacterized protein3.6e-2153.72Show/hide
Query:  MTLKISNFLFTMLWISLLLLLLHELNIFKAK-MNHKPTPTITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPHRRPNRPPKHSHLADTNVELAP---AND
        M LK+S  +F  LW+SLL+LL H+L   K+K +N K   TIT+   S+  SNHPLITRKVL S+ DFTPF  H +  +   H  L+  N+ + P    ++
Subjt:  MTLKISNFLFTMLWISLLLLLLHELNIFKAK-MNHKPTPTITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPHRRPNRPPKHSHLADTNVELAP---AND

Query:  IDPRYGVEKRRVPTGPNPLHH
        IDPRYGVEKRRVPTGPNPLHH
Subjt:  IDPRYGVEKRRVPTGPNPLHH

SwissProt top hitse value%identityAlignment
A2X462 Protein FON2 SPARE15.9e-0572Show/hide
Query:  PANDIDPRYGVEKRRVPTGPNPLHH
        P  ++DPR+GV+KR VPTGPNPLHH
Subjt:  PANDIDPRYGVEKRRVPTGPNPLHH

Q29PU4 CLAVATA3/ESR (CLE)-related protein 128.2e-1544.44Show/hide
Query:  MTLKISNFLFTMLWISLLLLLLHELNIFKAKMNHKPTPTITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPHRRPNRPPKHSHLADTNVELAPANDIDPR
        M LK S  LF +LW+SL  LLLH L     +  +     +  S       ++ L++RKVL+ + DFTPF  H R N   +H+H +    E    ++IDPR
Subjt:  MTLKISNFLFTMLWISLLLLLLHELNIFKAKMNHKPTPTITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPHRRPNRPPKHSHLADTNVELAPANDIDPR

Query:  YGVEKRRVPTGPNPLHH
        YGVEKRRVP+GPNPLHH
Subjt:  YGVEKRRVPTGPNPLHH

Q6NMF0 CLAVATA3/ESR (CLE)-related protein 133.7e-0737.29Show/hide
Query:  TLKISNFLFTMLWISLLLLLLHEL--NIFKAKMNHKPTPTITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPHRRPNRPPKHSHLADTNVELAPANDIDP
        T ++S+ L  +LWISLL+ +   L  N     +N  P+P IT               R +     DFTPF    R +   K           A  ++IDP
Subjt:  TLKISNFLFTMLWISLLLLLLHEL--NIFKAKMNHKPTPTITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPHRRPNRPPKHSHLADTNVELAPANDIDP

Query:  RYGVEKRRVPTGPNPLHH
        RYGVEKR VP+GPNPLHH
Subjt:  RYGVEKRRVPTGPNPLHH

Q9FZE4 CLAVATA3/ESR (CLE)-related protein 96.5e-0472Show/hide
Query:  PANDIDPRYGVEKRRVPTGPNPLHH
        P  +IDPRYGV+KR VP+GPNPLH+
Subjt:  PANDIDPRYGVEKRRVPTGPNPLHH

Arabidopsis top hitse value%identityAlignment
AT1G26600.1 CLAVATA3/ESR-RELATED 94.6e-0572Show/hide
Query:  PANDIDPRYGVEKRRVPTGPNPLHH
        P  +IDPRYGV+KR VP+GPNPLH+
Subjt:  PANDIDPRYGVEKRRVPTGPNPLHH

AT1G68795.1 CLAVATA3/ESR-RELATED 125.8e-1644.44Show/hide
Query:  MTLKISNFLFTMLWISLLLLLLHELNIFKAKMNHKPTPTITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPHRRPNRPPKHSHLADTNVELAPANDIDPR
        M LK S  LF +LW+SL  LLLH L     +  +     +  S       ++ L++RKVL+ + DFTPF  H R N   +H+H +    E    ++IDPR
Subjt:  MTLKISNFLFTMLWISLLLLLLHELNIFKAKMNHKPTPTITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPHRRPNRPPKHSHLADTNVELAPANDIDPR

Query:  YGVEKRRVPTGPNPLHH
        YGVEKRRVP+GPNPLHH
Subjt:  YGVEKRRVPTGPNPLHH

AT1G69320.1 CLAVATA3/ESR-RELATED 101.0e-0472Show/hide
Query:  PANDIDPRYGVEKRRVPTGPNPLHH
        P  +ID RYGVEKR VP+GPNPLH+
Subjt:  PANDIDPRYGVEKRRVPTGPNPLHH

AT1G73965.1 CLAVATA3/ESR-RELATED 132.6e-0837.29Show/hide
Query:  TLKISNFLFTMLWISLLLLLLHEL--NIFKAKMNHKPTPTITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPHRRPNRPPKHSHLADTNVELAPANDIDP
        T ++S+ L  +LWISLL+ +   L  N     +N  P+P IT               R +     DFTPF    R +   K           A  ++IDP
Subjt:  TLKISNFLFTMLWISLLLLLLHEL--NIFKAKMNHKPTPTITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPHRRPNRPPKHSHLADTNVELAPANDIDP

Query:  RYGVEKRRVPTGPNPLHH
        RYGVEKR VP+GPNPLHH
Subjt:  RYGVEKRRVPTGPNPLHH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATTGAAAATTTCCAACTTCCTTTTTACCATGCTTTGGATCTCTCTTCTTCTCTTATTACTTCATGAACTAAACATCTTCAAGGCCAAAATGAATCACAAACCAAC
ACCAACCATCACATTTTCCTATTCTTCTTCTTCCTCCTCCAACCATCCCTTGATAACAAGGAAGGTACTAACCAGCAAGGTAGACTTCACCCCCTTTTTCCCGCACCGCA
GGCCGAATCGACCACCAAAGCATTCCCATCTCGCCGACACCAACGTCGAACTAGCCCCCGCCAATGACATCGATCCTCGCTACGGTGTTGAGAAGCGACGAGTCCCTACC
GGTCCAAACCCATTGCACCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGACATTGAAAATTTCCAACTTCCTTTTTACCATGCTTTGGATCTCTCTTCTTCTCTTATTACTTCATGAACTAAACATCTTCAAGGCCAAAATGAATCACAAACCAAC
ACCAACCATCACATTTTCCTATTCTTCTTCTTCCTCCTCCAACCATCCCTTGATAACAAGGAAGGTACTAACCAGCAAGGTAGACTTCACCCCCTTTTTCCCGCACCGCA
GGCCGAATCGACCACCAAAGCATTCCCATCTCGCCGACACCAACGTCGAACTAGCCCCCGCCAATGACATCGATCCTCGCTACGGTGTTGAGAAGCGACGAGTCCCTACC
GGTCCAAACCCATTGCACCATTGA
Protein sequenceShow/hide protein sequence
MTLKISNFLFTMLWISLLLLLLHELNIFKAKMNHKPTPTITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPHRRPNRPPKHSHLADTNVELAPANDIDPRYGVEKRRVPT
GPNPLHH