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Clc01G06130 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G06130
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionProtein IDA-like
Genome locationClcChr01:5885132..5885906
RNA-Seq ExpressionClc01G06130
SyntenyClc01G06130
Gene Ontology termsGO:0010227 - floral organ abscission (biological process)
GO:0005615 - extracellular space (cellular component)
InterPro domainsIPR039639 - Protein IDA-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034518.1 putative Membrane lipoprotein [Cucumis melo var. makuwa]1.0e-0852.56Show/hide
Query:  NAFLLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
        N+  + +LLLL+   F+SA R  P  T   P  S++   TTAFR+  Q F FLPKG PIPPS PS RHNS+VDS P N
Subjt:  NAFLLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
KAG6579701.1 hypothetical protein SDJN03_24149, partial [Cucurbita argyrosperma subsp. sororia]3.1e-1061.04Show/hide
Query:  SNAFLLLLLLLLIPLAFTSAARPFPAT---TTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVD
        SNA LL   LL + L F S+ARP PAT   T+  P P+      TAFR  HQ+FSFLPKG PIPPSAPSKRHNS+VD
Subjt:  SNAFLLLLLLLLIPLAFTSAARPFPAT---TTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVD
KGN51548.1 hypothetical protein Csa_008377 [Cucumis sativus]1.0e-1669.51Show/hide
Query:  MASSNAFLLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
        MASS+ F +LLL+L  PL   + ARPFPA TT+  P SHNT  TTAFR  HQIFSFLPKG PIPPSAPSKRHNSL++SAP N
Subjt:  MASSNAFLLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
KGN52035.1 hypothetical protein Csa_008746 [Cucumis sativus]2.3e-0855.26Show/hide
Query:  FLLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
        F+LLLLLLL+    +SA RP          P  +    TAFR+G Q FSFLPKG PIPPS PS RHNS+VDS P N
Subjt:  FLLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
TYK09072.1 putative Membrane lipoprotein [Cucumis melo var. makuwa]1.0e-0852.56Show/hide
Query:  NAFLLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
        N+  + +LLLL+   F+SA R  P  T   P  S++   TTAFR+  Q F FLPKG PIPPS PS RHNS+VDS P N
Subjt:  NAFLLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
TrEMBL top hitse value%identityAlignment
A0A059BFA1 Uncharacterized protein5.4e-0854.22Show/hide
Query:  AFLLLLLLLLIPLAFTSAARPFPATTTIMPP---PSH---NTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
        AF LLLLLL       +AARP P TTT M P   P H   + P  TAFRH   IFS+LPKG  +PPS PS RHNS ++S P N
Subjt:  AFLLLLLLLLIPLAFTSAARPFPATTTIMPP---PSH---NTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
A0A0A0KPP8 Uncharacterized protein4.9e-1769.51Show/hide
Query:  MASSNAFLLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
        MASS+ F +LLL+L  PL   + ARPFPA TT+  P SHNT  TTAFR  HQIFSFLPKG PIPPSAPSKRHNSL++SAP N
Subjt:  MASSNAFLLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
A0A0A0KR07 Uncharacterized protein1.1e-0855.26Show/hide
Query:  FLLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
        F+LLLLLLL+    +SA RP          P  +    TAFR+G Q FSFLPKG PIPPS PS RHNS+VDS P N
Subjt:  FLLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
A0A5A7SV51 Putative Membrane lipoprotein4.9e-0952.56Show/hide
Query:  NAFLLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
        N+  + +LLLL+   F+SA R  P  T   P  S++   TTAFR+  Q F FLPKG PIPPS PS RHNS+VDS P N
Subjt:  NAFLLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
A0A5D3CCP4 Putative Membrane lipoprotein4.9e-0952.56Show/hide
Query:  NAFLLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
        N+  + +LLLL+   F+SA R  P  T   P  S++   TTAFR+  Q F FLPKG PIPPS PS RHNS+VDS P N
Subjt:  NAFLLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
SwissProt top hitse value%identityAlignment
Q8LAD7 Protein IDA1.6e-0445.12Show/hide
Query:  MASSNAFLLLLLLLLIPLAFTS--AARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAP
        MA     ++LL  +L   A +S  AA    AT  +      N    T F++ H IF +LPKG PIPPSAPSKRHNS V+S P
Subjt:  MASSNAFLLLLLLLLIPLAFTS--AARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAP
Arabidopsis top hitse value%identityAlignment
AT1G68765.1 Putative membrane lipoprotein1.1e-0545.12Show/hide
Query:  MASSNAFLLLLLLLLIPLAFTS--AARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAP
        MA     ++LL  +L   A +S  AA    AT  +      N    T F++ H IF +LPKG PIPPSAPSKRHNS V+S P
Subjt:  MASSNAFLLLLLLLLIPLAFTS--AARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAP
AT5G64667.1 inflorescence deficient in abscission (IDA)-like 28.0e-0434.85Show/hide
Query:  LLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSL
        +LLLL++ L F + AR         P   HN   +++ +   Q   FLP+ FP+P S PS++HN +
Subjt:  LLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCCTCCAACGCCTTCCTCCTCCTCCTCCTCCTTCTTCTAATTCCCCTTGCTTTCACCTCCGCCGCAAGGCCATTTCCGGCAACCACAACAATAATGCCGCCGCC
GTCGCACAACACCCCAGCCACCACCGCCTTCCGCCACGGTCATCAAATCTTCAGCTTCCTCCCCAAAGGCTTTCCCATTCCGCCCTCCGCTCCTTCAAAGAGACACAACT
CGCTCGTTGACTCCGCCCCCCGAAACTGA
mRNA sequenceShow/hide mRNA sequence
CCCAAAGGCGTTGACATTGAAAAATGTCCAATAGTCATATAGCGTGTTAGCGTGTGAGCCTAATTTCTCCAAACTTTCCTTCTTAATTCATTTCATGCAAATATATAATC
CCATTCCTTTTCCCCCTTTTTTTCTCATTCCTCTCTTCTCTCTCCCCCTTCCCTTCCCATGGCCTCCTCCAACGCCTTCCTCCTCCTCCTCCTCCTTCTTCTAATTCCCC
TTGCTTTCACCTCCGCCGCAAGGCCATTTCCGGCAACCACAACAATAATGCCGCCGCCGTCGCACAACACCCCAGCCACCACCGCCTTCCGCCACGGTCATCAAATCTTC
AGCTTCCTCCCCAAAGGCTTTCCCATTCCGCCCTCCGCTCCTTCAAAGAGACACAACTCGCTCGTTGACTCCGCCCCCCGAAACTGAGTTCTCACTCCTCCTAATTTCCC
ATATACACATCTTTTTTCTTTTTCTTTTTTTTTCTTTTTTTCTTTTTAAATGTGTAGTGTTGAATTTTTCCAGGGCGCTGTGATCTGGATTCTCTATCAGATAATCTCAG
ATCCTAATTACAATTTACAGCCTGATTTTTTTTTTCTTTTTCCTGGAAAATATAAATATTATATATATATTGTGTATACAAAATTCCATTTGTTTATATATGTGAGCATT
CCTTAATTAGAGGATTTTTTTTTTCTTTTTTTTGAGTTTGTCTGACTGTGTCTATTCATAATATACGATGTAGTTTTGATTTGAATTTTGTGATTCCGGTTAATTATGAT
CCATC
Protein sequenceShow/hide protein sequence
MASSNAFLLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN