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Clc01G06310 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G06310
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr01:6148966..6149621
RNA-Seq ExpressionClc01G06310
SyntenyClc01G06310
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579228.1 hypothetical protein SDJN03_23676, partial [Cucurbita argyrosperma subsp. sororia]5.4e-2675.93Show/hide
Query:  MVKPAVKAVLVEDVAAGKAADEVAGGERGETDDAVGGRIVVGVSVAVGEEAIEMKVMGERGNIRERETVVGGGRGGGEERAEKGDEIGEEREKEERERVV
        M++  V+AVLVEDVAA KAADEVAGGERGETDDAVGG I VGV VAV EEAIE+KV+GERGNI   E VVG  R GGE+ AEKG+EIGEERE+EERER+ 
Subjt:  MVKPAVKAVLVEDVAAGKAADEVAGGERGETDDAVGGRIVVGVSVAVGEEAIEMKVMGERGNIRERETVVGGGRGGGEERAEKGDEIGEEREKEERERVV

Query:  GEIVELAL
        GE+VELAL
Subjt:  GEIVELAL

KAG6601827.1 hypothetical protein SDJN03_07060, partial [Cucurbita argyrosperma subsp. sororia]3.4e-1261.22Show/hide
Query:  MVKPAVKAVLVEDVAAGKAADEVAGGERGETDDAVGGRIVVGVSVAVGEEAIEMKVMGERGNIRERETVVGGGRGGGEER-AEKGDEIGEEREKEERE
        M+KP ++AVLVEDV A + AD V  GE  E DD VGG   +GV VAVGE+AIEMK++ ERGNI      +G   GGGEER AE+G+EIGEERE+EERE
Subjt:  MVKPAVKAVLVEDVAAGKAADEVAGGERGETDDAVGGRIVVGVSVAVGEEAIEMKVMGERGNIRERETVVGGGRGGGEER-AEKGDEIGEEREKEERE

KGN51526.1 hypothetical protein Csa_008164 [Cucumis sativus]7.3e-2365.14Show/hide
Query:  MVKPAVKAVLVEDVAAGKAADEVAGGERGETDDAVGGRI-VVGVSVAVGEEAIEMKVMGERGNIRERETVVGGGRGGGEERAEKGDEIGEEREKEERERV
        MVKPAV+AV +E+VAAG+ ADEV G ERGETDDA+GG + VVGV V VGE+AIEM+++G+RG IR   TVVGGG  GG   AE+ +EIG+ERE+EERER+
Subjt:  MVKPAVKAVLVEDVAAGKAADEVAGGERGETDDAVGGRI-VVGVSVAVGEEAIEMKVMGERGNIRERETVVGGGRGGGEERAEKGDEIGEEREKEERERV

Query:  VGEIVELAL
        VGE++EL +
Subjt:  VGEIVELAL

TrEMBL top hitse value%identityAlignment
A0A0A0KUZ6 Uncharacterized protein3.5e-2365.14Show/hide
Query:  MVKPAVKAVLVEDVAAGKAADEVAGGERGETDDAVGGRI-VVGVSVAVGEEAIEMKVMGERGNIRERETVVGGGRGGGEERAEKGDEIGEEREKEERERV
        MVKPAV+AV +E+VAAG+ ADEV G ERGETDDA+GG + VVGV V VGE+AIEM+++G+RG IR   TVVGGG  GG   AE+ +EIG+ERE+EERER+
Subjt:  MVKPAVKAVLVEDVAAGKAADEVAGGERGETDDAVGGRI-VVGVSVAVGEEAIEMKVMGERGNIRERETVVGGGRGGGEERAEKGDEIGEEREKEERERV

Query:  VGEIVELAL
        VGE++EL +
Subjt:  VGEIVELAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAAGCCAGCCGTCAAGGCAGTCCTTGTGGAAGACGTGGCGGCAGGGAAGGCGGCGGACGAGGTGGCCGGCGGAGAGAGGGGAGAGACAGACGACGCAGTCGGAGG
CAGAATCGTGGTCGGAGTGAGCGTAGCGGTGGGAGAGGAGGCGATTGAGATGAAGGTGATGGGGGAGAGGGGAAATATCAGGGAGAGGGAGACGGTGGTCGGCGGAGGGA
GGGGCGGCGGAGAGGAAAGAGCGGAGAAGGGAGACGAAATTGGCGAGGAGAGAGAGAAAGAAGAGAGGGAGAGAGTGGTAGGAGAAATCGTTGAGTTGGCTCTGTAA
mRNA sequenceShow/hide mRNA sequence
GTTTAAAAAAAAAAAAAGGCATCTGAATCAGGAATGAAAAGGATTCGAACACGTGGCAGGCGCGGAGCGGTGGGATCATCGAAGAGAGAACCAAGCGATAACGTGGTCAG
GGAGACGGAAGCGGTGGCGCGTGAGGGGAACGCGCTGGTCTAGAAGAAGGGGAGAGCGGCAGAGAGGGCAGTTGAAGTTGAGATGGTGAAGCCAGCCGTCAAGGCAGTCC
TTGTGGAAGACGTGGCGGCAGGGAAGGCGGCGGACGAGGTGGCCGGCGGAGAGAGGGGAGAGACAGACGACGCAGTCGGAGGCAGAATCGTGGTCGGAGTGAGCGTAGCG
GTGGGAGAGGAGGCGATTGAGATGAAGGTGATGGGGGAGAGGGGAAATATCAGGGAGAGGGAGACGGTGGTCGGCGGAGGGAGGGGCGGCGGAGAGGAAAGAGCGGAGAA
GGGAGACGAAATTGGCGAGGAGAGAGAGAAAGAAGAGAGGGAGAGAGTGGTAGGAGAAATCGTTGAGTTGGCTCTGTAAACCCATTTTCAAAATGCTAAAGTTTGTTGAG
AAATTTGAGAGAAAGAGAGGATATAGAGAATGGGTTTGGGGGAAAAGGGAATTGGGTTCATATGTGAGAGAGAAAGAGAAAGAGAAAGAGATGTGTGTGGGTTTTG
Protein sequenceShow/hide protein sequence
MVKPAVKAVLVEDVAAGKAADEVAGGERGETDDAVGGRIVVGVSVAVGEEAIEMKVMGERGNIRERETVVGGGRGGGEERAEKGDEIGEEREKEERERVVGEIVELAL