; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc01G06760 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G06760
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionF-box protein SKIP28
Genome locationClcChr01:6777009..6779371
RNA-Seq ExpressionClc01G06760
SyntenyClc01G06760
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR017900 - 4Fe-4S ferredoxin, iron-sulphur binding, conserved site
IPR032675 - Leucine-rich repeat domain superfamily
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046341.1 F-box protein SKIP28 isoform X1 [Cucumis melo var. makuwa]1.7e-14082.18Show/hide
Query:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALI
        MSENQEPPNPAA A         EAGPPHEALF V+SYL LFELLSM AVCVSLRDAVEHDVLPWLHI+VD RLSSRLSDYTLGRIARKAGGRLRTLALI
Subjt:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQQERQHHHLYHEHIDRSK
        +CFKISDSGLHEVVE NPLLTKLYVPGCTSLTPAGVVRAV+T SQHSHNLK+LMIGGIYNIEN HLEVL+ HL +NRSQ +QQ+ RQ HHLYHEH+DR  
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQQERQHHHLYHEHIDRSK

Query:  LLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN
        LL N+F P+IDVQICPKCYDIRNVYDCSRERCKIKQ E  L DCRGCI C+PRCEECGGCVD DEIEEA+C GI+CSSCWLQLPKCNHCNR YC RHR N
Subjt:  LLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN

Query:  IET
        + +
Subjt:  IET

XP_004150124.1 F-box protein SKIP28 [Cucumis sativus]5.8e-14181.52Show/hide
Query:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALI
        MSENQEPPNPA+ A         EAGPPHEALF V++YLPLFELLS+ AVCVSLRDAVEHDVLPWLHI+VD RLSSRLSDYTLGRIARKA GRLRTLALI
Subjt:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQQERQHHHLYHEHIDRSK
        NCFKISDSGLHEVVE NPLLTKLYVPGCTSLTP GVVRAV+TLSQ SHNLK+LMIGGIYNIENQHLEVL+ HL +NRS  +QQ+ RQ HHLYHEH+DR +
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQQERQHHHLYHEHIDRSK

Query:  LLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN
        LL ++F PVIDVQICPKCYDIRNVYDCSRERCKIKQ E  L DCRGCICC+PRCEECGGCVDDDEIEEA+C+ ILCSSCW QLPKCNHCNR YC RHR N
Subjt:  LLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN

Query:  IET
        + +
Subjt:  IET

XP_008467113.1 PREDICTED: F-box protein SKIP28 isoform X2 [Cucumis melo]1.8e-14278.48Show/hide
Query:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALI
        MSENQEPPNPAA A         EAGPPHEALF V+SYL LFELLSM AVCVSLRDAVEHDVLPWLHI+VD RLSSRLSDYTLGRIARKAGGRLRTLALI
Subjt:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQQERQHHHLYHEHIDRSK
        +CFKISDSGLHEVVE NPLLTKLYVPGCTSLTPAGVVRAV+T SQHSHNLK+LMIGGIYNIEN HLEVL+ HL +NRSQ +QQ+ RQ HHLYHEH+DR  
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQQERQHHHLYHEHIDRSK

Query:  LLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN
        LL N+F P+IDVQICPKCYDIRNVYDCSRERCKIKQ E  L DCRGCI C+PRCEECGGCVD DEIEEA+C GI+CSSCWLQLPKCNHCNR YC RHR N
Subjt:  LLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN

Query:  IETRSPCLHFLYLAKERCKAGLQQDMLCLN
         E                   LQQDMLCLN
Subjt:  IETRSPCLHFLYLAKERCKAGLQQDMLCLN

XP_016903294.1 PREDICTED: F-box protein SKIP28 isoform X1 [Cucumis melo]9.9e-14182.78Show/hide
Query:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALI
        MSENQEPPNPAA A         EAGPPHEALF V+SYL LFELLSM AVCVSLRDAVEHDVLPWLHI+VD RLSSRLSDYTLGRIARKAGGRLRTLALI
Subjt:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQQERQHHHLYHEHIDRSK
        +CFKISDSGLHEVVE NPLLTKLYVPGCTSLTPAGVVRAV+T SQHSHNLK+LMIGGIYNIEN HLEVL+ HL +NRSQ +QQ+ RQ HHLYHEH+DR  
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQQERQHHHLYHEHIDRSK

Query:  LLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN
        LL N+F P+IDVQICPKCYDIRNVYDCSRERCKIKQ E  L DCRGCI C+PRCEECGGCVD DEIEEA+C GI+CSSCWLQLPKCNHCNR YC RHR N
Subjt:  LLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN

Query:  IE
        I+
Subjt:  IE

XP_038906463.1 F-box protein SKIP28 [Benincasa hispida]2.5e-15288.45Show/hide
Query:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALI
        MSENQEP NPAA AGSS  GVR+EAGPPHEALFLVLSYLPLFELLSM +VCVSLRDAVEHDVLPWLHI+VDRRLSSRLSDY LGRIARKAGGRLRTLALI
Subjt:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQQERQHHHLYHEHIDRSK
        NCFKISDSG HEVVEKNPLLTKLYVPGCTSLTP GVVRAV+TLSQHSHNLKSLMIGGIYNIEN+HLEVLKCHL +NRS  QQQ+ERQ HHLY EHIDRSK
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQQERQHHHLYHEHIDRSK

Query:  LLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN
        LL NEFQPVIDVQICPKC +IR+VYDCSRERCKIKQE+Q L DCRGCI C+PRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNR YCTRH  N
Subjt:  LLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN

Query:  IET
        + +
Subjt:  IET

TrEMBL top hitse value%identityAlignment
A0A0A0KSU6 F-box domain-containing protein2.8e-14181.52Show/hide
Query:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALI
        MSENQEPPNPA+ A         EAGPPHEALF V++YLPLFELLS+ AVCVSLRDAVEHDVLPWLHI+VD RLSSRLSDYTLGRIARKA GRLRTLALI
Subjt:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQQERQHHHLYHEHIDRSK
        NCFKISDSGLHEVVE NPLLTKLYVPGCTSLTP GVVRAV+TLSQ SHNLK+LMIGGIYNIENQHLEVL+ HL +NRS  +QQ+ RQ HHLYHEH+DR +
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQQERQHHHLYHEHIDRSK

Query:  LLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN
        LL ++F PVIDVQICPKCYDIRNVYDCSRERCKIKQ E  L DCRGCICC+PRCEECGGCVDDDEIEEA+C+ ILCSSCW QLPKCNHCNR YC RHR N
Subjt:  LLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN

Query:  IET
        + +
Subjt:  IET

A0A1S3CSR5 F-box protein SKIP28 isoform X28.7e-14378.48Show/hide
Query:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALI
        MSENQEPPNPAA A         EAGPPHEALF V+SYL LFELLSM AVCVSLRDAVEHDVLPWLHI+VD RLSSRLSDYTLGRIARKAGGRLRTLALI
Subjt:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQQERQHHHLYHEHIDRSK
        +CFKISDSGLHEVVE NPLLTKLYVPGCTSLTPAGVVRAV+T SQHSHNLK+LMIGGIYNIEN HLEVL+ HL +NRSQ +QQ+ RQ HHLYHEH+DR  
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQQERQHHHLYHEHIDRSK

Query:  LLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN
        LL N+F P+IDVQICPKCYDIRNVYDCSRERCKIKQ E  L DCRGCI C+PRCEECGGCVD DEIEEA+C GI+CSSCWLQLPKCNHCNR YC RHR N
Subjt:  LLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN

Query:  IETRSPCLHFLYLAKERCKAGLQQDMLCLN
         E                   LQQDMLCLN
Subjt:  IETRSPCLHFLYLAKERCKAGLQQDMLCLN

A0A1S4E4Z1 F-box protein SKIP28 isoform X14.8e-14182.78Show/hide
Query:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALI
        MSENQEPPNPAA A         EAGPPHEALF V+SYL LFELLSM AVCVSLRDAVEHDVLPWLHI+VD RLSSRLSDYTLGRIARKAGGRLRTLALI
Subjt:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQQERQHHHLYHEHIDRSK
        +CFKISDSGLHEVVE NPLLTKLYVPGCTSLTPAGVVRAV+T SQHSHNLK+LMIGGIYNIEN HLEVL+ HL +NRSQ +QQ+ RQ HHLYHEH+DR  
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQQERQHHHLYHEHIDRSK

Query:  LLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN
        LL N+F P+IDVQICPKCYDIRNVYDCSRERCKIKQ E  L DCRGCI C+PRCEECGGCVD DEIEEA+C GI+CSSCWLQLPKCNHCNR YC RHR N
Subjt:  LLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN

Query:  IE
        I+
Subjt:  IE

A0A5A7TYB5 F-box protein SKIP28 isoform X18.2e-14182.18Show/hide
Query:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALI
        MSENQEPPNPAA A         EAGPPHEALF V+SYL LFELLSM AVCVSLRDAVEHDVLPWLHI+VD RLSSRLSDYTLGRIARKAGGRLRTLALI
Subjt:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQQERQHHHLYHEHIDRSK
        +CFKISDSGLHEVVE NPLLTKLYVPGCTSLTPAGVVRAV+T SQHSHNLK+LMIGGIYNIEN HLEVL+ HL +NRSQ +QQ+ RQ HHLYHEH+DR  
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQQERQHHHLYHEHIDRSK

Query:  LLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN
        LL N+F P+IDVQICPKCYDIRNVYDCSRERCKIKQ E  L DCRGCI C+PRCEECGGCVD DEIEEA+C GI+CSSCWLQLPKCNHCNR YC RHR N
Subjt:  LLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN

Query:  IET
        + +
Subjt:  IET

A0A6J1FGL5 F-box protein SKIP282.8e-13378.69Show/hide
Query:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALI
        MSEN + PN  A  GSSS GVR+ AGPPHEALFLVLSYLPLFELLSM AVCVSLRDAV HDVLPWLH++VDR LSSRL+DY LGRIARKA GRLRTLALI
Subjt:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQQERQHHHLYHEHIDRSK
        NCFKISDS LHEVVE NPLLTKLYVPGCTSLTP GV+RAVETLSQHSHNL SLMIGGIYNIEN+HLEVLK HL KNRSQQQQQQ+ Q    +HEHI+ SK
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQQERQHHHLYHEHIDRSK

Query:  LLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN
        LL N++  +IDV++CPKC +I  VYDCSRERCKIKQE+++  +CRGC  CVPRCEECGGCVD DE EEAVCAGILC+SCWLQLPKCNHCNR YCTRH  N
Subjt:  LLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN

Query:  IETRS
        + + S
Subjt:  IETRS

SwissProt top hitse value%identityAlignment
A2RT62 F-box/LRR-repeat protein 162.8e-0526.98Show/hide
Query:  CVSLRDAVEHDVLPWLHILVDRRLSS-RLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHN
        C+++ D     +   L  L +  L +  ++D  L     + G    TL L++C++I++ G+  VV   P LT L + GC+ +T  G    VE ++++   
Subjt:  CVSLRDAVEHDVLPWLHILVDRRLSS-RLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHN

Query:  LKSLMIGGIYNIENQHLEVLKCHLFK
        L+SL +     I +  LE + C L +
Subjt:  LKSLMIGGIYNIENQHLEVLKCHLFK

Q5MJ12 F-box/LRR-repeat protein 162.8e-0526.98Show/hide
Query:  CVSLRDAVEHDVLPWLHILVDRRLSS-RLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHN
        C+++ D     +   L  L +  L +  ++D  L     + G    TL L++C++I++ G+  VV   P LT L + GC+ +T  G    VE ++++   
Subjt:  CVSLRDAVEHDVLPWLHILVDRRLSS-RLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHN

Query:  LKSLMIGGIYNIENQHLEVLKCHLFK
        L+SL +     I +  LE + C L +
Subjt:  LKSLMIGGIYNIENQHLEVLKCHLFK

Q9LK24 F-box protein At3g272902.8e-2935.41Show/hide
Query:  GPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHI-LVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLY
        G  H+A  LVL YL L E+L++  VC SLRD+V  +   W  I L D  L  R++D +L ++ R+A G +R L L  C  I+D GL +V+  NP LTKL 
Subjt:  GPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHI-LVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLY

Query:  VPGCTSLTPAGVVRAVETL-SQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRN
        V GC  L+ AG+V  +  L S +   +KSL+ GG      +  + L   L  +     Q+++++ +        RS+    E   V D++ICP C     
Subjt:  VPGCTSLTPAGVVRAVETL-SQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRN

Query:  VYDCSRERCKIK-QEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSC
        V+DC  + C +K Q   +   CR C+ C+ RC ECG C++D E  +  C    C  C
Subjt:  VYDCSRERCKIK-QEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSC

Q9LU91 F-box protein SKIP143.5e-3232.05Show/hide
Query:  HEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGC
        H A+   L +L   +LLS+  VC SL   V  D L W HI + R L+ ++++  L  +  +A G ++ L +++C +I+D  L  VV +N  + K+ VPGC
Subjt:  HEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGC

Query:  TSLTPAGVVRAVETL-SQHSHNLKSLMIGGIYNIENQHL-EVLKCHLFKNRSQQQQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRNVYD
        T +T  G++  +  L S     +K L + G++ +   H  E++      N+ +Q  Q+ R +H         + + C++    +D+++CPKC + + VYD
Subjt:  TSLTPAGVVRAVETL-SQHSHNLKSLMIGGIYNIENQHL-EVLKCHLFKNRSQQQQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRNVYD

Query:  CSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPK
        C  E CK K++     +CR C  C+ RC  CG C+ D E EE  C  +LC+ C    PK
Subjt:  CSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPK

Q9ZU90 F-box protein SKIP281.2e-5340.57Show/hide
Query:  HEALFLVLSYL-PLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPG
        HE L +VL YL  LFELLSM  V  SLRDA+  +   W  ++++  LSSRL+D  L   + K+ G+L+TL L  C  +++ GL  VV+ NPL+TK+ VPG
Subjt:  HEALFLVLSYL-PLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPG

Query:  CTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRNVYDC
        C+ LTP G++  VE+LS+++H L++L I G+     QHL  L  +L                                 +  ID+++CPKC ++R +  C
Subjt:  CTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRNVYDC

Query:  SRERCKIKQEEQTLGDCRGCICCVPRCEECGGCV--DDDEIEEAVCAG--ILCSSCWLQLPKCNHCNRSYCTRH---RHNI
        SRE C  KQ +     CRGC  C+PRC EC  C+   D E +EA C    +LC  CWL LPKC  CN+ YCT H   RH I
Subjt:  SRERCKIKQEEQTLGDCRGCICCVPRCEECGGCV--DDDEIEEAVCAG--ILCSSCWLQLPKCNHCNRSYCTRH---RHNI

Arabidopsis top hitse value%identityAlignment
AT2G01620.1 RNI-like superfamily protein8.8e-5540.57Show/hide
Query:  HEALFLVLSYL-PLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPG
        HE L +VL YL  LFELLSM  V  SLRDA+  +   W  ++++  LSSRL+D  L   + K+ G+L+TL L  C  +++ GL  VV+ NPL+TK+ VPG
Subjt:  HEALFLVLSYL-PLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPG

Query:  CTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRNVYDC
        C+ LTP G++  VE+LS+++H L++L I G+     QHL  L  +L                                 +  ID+++CPKC ++R +  C
Subjt:  CTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRNVYDC

Query:  SRERCKIKQEEQTLGDCRGCICCVPRCEECGGCV--DDDEIEEAVCAG--ILCSSCWLQLPKCNHCNRSYCTRH---RHNI
        SRE C  KQ +     CRGC  C+PRC EC  C+   D E +EA C    +LC  CWL LPKC  CN+ YCT H   RH I
Subjt:  SRERCKIKQEEQTLGDCRGCICCVPRCEECGGCV--DDDEIEEAVCAG--ILCSSCWLQLPKCNHCNRSYCTRH---RHNI

AT3G26000.1 Ribonuclease inhibitor2.5e-3332.05Show/hide
Query:  HEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGC
        H A+   L +L   +LLS+  VC SL   V  D L W HI + R L+ ++++  L  +  +A G ++ L +++C +I+D  L  VV +N  + K+ VPGC
Subjt:  HEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGC

Query:  TSLTPAGVVRAVETL-SQHSHNLKSLMIGGIYNIENQHL-EVLKCHLFKNRSQQQQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRNVYD
        T +T  G++  +  L S     +K L + G++ +   H  E++      N+ +Q  Q+ R +H         + + C++    +D+++CPKC + + VYD
Subjt:  TSLTPAGVVRAVETL-SQHSHNLKSLMIGGIYNIENQHL-EVLKCHLFKNRSQQQQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRNVYD

Query:  CSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPK
        C  E CK K++     +CR C  C+ RC  CG C+ D E EE  C  +LC+ C    PK
Subjt:  CSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPK

AT3G27290.1 RNI-like superfamily protein2.0e-3035.41Show/hide
Query:  GPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHI-LVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLY
        G  H+A  LVL YL L E+L++  VC SLRD+V  +   W  I L D  L  R++D +L ++ R+A G +R L L  C  I+D GL +V+  NP LTKL 
Subjt:  GPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHI-LVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLY

Query:  VPGCTSLTPAGVVRAVETL-SQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRN
        V GC  L+ AG+V  +  L S +   +KSL+ GG      +  + L   L  +     Q+++++ +        RS+    E   V D++ICP C     
Subjt:  VPGCTSLTPAGVVRAVETL-SQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRN

Query:  VYDCSRERCKIK-QEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSC
        V+DC  + C +K Q   +   CR C+ C+ RC ECG C++D E  +  C    C  C
Subjt:  VYDCSRERCKIK-QEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGAGAATCAGGAACCACCAAATCCGGCGGCTACCGCTGGGAGTTCGTCTTCCGGCGTTCGAATGGAAGCAGGGCCACCGCACGAGGCGTTATTTCTTGTACTGAG
TTATCTTCCTCTCTTTGAGCTTCTTTCCATGAGGGCAGTGTGCGTATCGCTGAGAGACGCAGTGGAACATGATGTGTTGCCGTGGCTTCACATCCTCGTCGATCGGCGTT
TGAGCTCCCGGCTATCCGATTACACTCTGGGGAGAATCGCCAGGAAGGCCGGTGGTCGCCTTAGAACTTTGGCTTTGATCAATTGTTTCAAGATTTCAGATTCTGGACTT
CACGAAGTTGTTGAGAAGAATCCTCTTCTCACCAAGCTTTATGTACCTGGATGCACGAGTTTGACTCCTGCGGGAGTGGTTAGGGCAGTGGAGACTTTATCTCAACATTC
TCACAATTTGAAGAGCCTAATGATTGGTGGCATTTACAACATAGAGAACCAACACCTTGAAGTCCTCAAATGCCACCTTTTCAAGAACCGATCGCAGCAGCAGCAGCAGC
AGGAGCGGCAACACCACCACCTCTACCATGAGCACATTGATCGGTCGAAGTTGTTGTGTAATGAATTCCAGCCAGTGATTGATGTACAAATCTGCCCAAAATGCTATGAC
ATAAGGAATGTTTATGATTGCTCAAGGGAGAGATGCAAGATAAAGCAAGAGGAGCAAACACTGGGCGATTGTCGGGGTTGCATTTGTTGCGTTCCAAGGTGTGAAGAATG
CGGTGGATGTGTCGATGATGATGAAATAGAAGAGGCTGTATGTGCAGGTATCTTGTGTTCAAGTTGCTGGCTTCAACTTCCTAAATGCAACCATTGTAATAGGTCATATT
GCACGCGACACCGTCATAATATTGAAACTAGAAGCCCTTGTTTGCATTTTTTGTATCTTGCAAAAGAACGTTGCAAGGCAGGGCTGCAACAAGATATGCTTTGTTTGAAC
AGGGAAAATGTAAATCTTGCTGAAAGAAAGGAAAATTGTAAGCATATTCAAGTTTATAAGTTTGGCCTCTCAAATTATTGTGCAAGAACAGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGAGAATCAGGAACCACCAAATCCGGCGGCTACCGCTGGGAGTTCGTCTTCCGGCGTTCGAATGGAAGCAGGGCCACCGCACGAGGCGTTATTTCTTGTACTGAG
TTATCTTCCTCTCTTTGAGCTTCTTTCCATGAGGGCAGTGTGCGTATCGCTGAGAGACGCAGTGGAACATGATGTGTTGCCGTGGCTTCACATCCTCGTCGATCGGCGTT
TGAGCTCCCGGCTATCCGATTACACTCTGGGGAGAATCGCCAGGAAGGCCGGTGGTCGCCTTAGAACTTTGGCTTTGATCAATTGTTTCAAGATTTCAGATTCTGGACTT
CACGAAGTTGTTGAGAAGAATCCTCTTCTCACCAAGCTTTATGTACCTGGATGCACGAGTTTGACTCCTGCGGGAGTGGTTAGGGCAGTGGAGACTTTATCTCAACATTC
TCACAATTTGAAGAGCCTAATGATTGGTGGCATTTACAACATAGAGAACCAACACCTTGAAGTCCTCAAATGCCACCTTTTCAAGAACCGATCGCAGCAGCAGCAGCAGC
AGGAGCGGCAACACCACCACCTCTACCATGAGCACATTGATCGGTCGAAGTTGTTGTGTAATGAATTCCAGCCAGTGATTGATGTACAAATCTGCCCAAAATGCTATGAC
ATAAGGAATGTTTATGATTGCTCAAGGGAGAGATGCAAGATAAAGCAAGAGGAGCAAACACTGGGCGATTGTCGGGGTTGCATTTGTTGCGTTCCAAGGTGTGAAGAATG
CGGTGGATGTGTCGATGATGATGAAATAGAAGAGGCTGTATGTGCAGGTATCTTGTGTTCAAGTTGCTGGCTTCAACTTCCTAAATGCAACCATTGTAATAGGTCATATT
GCACGCGACACCGTCATAATATTGAAACTAGAAGCCCTTGTTTGCATTTTTTGTATCTTGCAAAAGAACGTTGCAAGGCAGGGCTGCAACAAGATATGCTTTGTTTGAAC
AGGGAAAATGTAAATCTTGCTGAAAGAAAGGAAAATTGTAAGCATATTCAAGTTTATAAGTTTGGCCTCTCAAATTATTGTGCAAGAACAGTCTGA
Protein sequenceShow/hide protein sequence
MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGL
HEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYD
IRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHNIETRSPCLHFLYLAKERCKAGLQQDMLCLN
RENVNLAERKENCKHIQVYKFGLSNYCARTV