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Clc01G07370 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G07370
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionDefensin-like protein 6
Genome locationClcChr01:7587825..7589382
RNA-Seq ExpressionClc01G07370
SyntenyClc01G07370
Gene Ontology termsGO:0031640 - killing of cells of other organism (biological process)
GO:0050832 - defense response to fungus (biological process)
InterPro domainsIPR003614 - Knottin, scorpion toxin-like
IPR008176 - Defensin, plant
IPR036574 - Knottin, scorpion toxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AHA50472.1 defensin-like protein 5 [Citrullus lanatus]3.3e-3186.9Show/hide
Query:  MKFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHCV
        MKFFSAAILLLLLIFGTG          MEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTK CV
Subjt:  MKFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHCV

AHA50473.1 defensin-like protein 6 [Citrullus lanatus]2.3e-3288.1Show/hide
Query:  MKFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHCV
        MKFFSAAILLLLLIFGTG          MEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHCV
Subjt:  MKFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHCV

XP_004151187.1 defensin Ec-AMP-D2 [Cucumis sativus]2.9e-2776.19Show/hide
Query:  MKFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHCV
        MKFFSA I LLLLIFG+G          M P+V EARVCES SH+FKGLCFS TNCGNICKTEGF+GGVCRGFRRRCFCTKHCV
Subjt:  MKFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHCV

XP_016898837.1 PREDICTED: defensin Ec-AMP-D2-like [Cucumis melo]5.9e-2877.38Show/hide
Query:  MKFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHCV
        MKFFSAAI LLLLIFGTG          M P+V EARVCES SH+FKGLCFS TNCGNICKTEGF+GG+CRGFRRRCFCTKHCV
Subjt:  MKFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHCV

XP_022990901.1 defensin Ec-AMP-D2-like [Cucurbita maxima]7.2e-2671.91Show/hide
Query:  MKFFSAAILLLLLIFGTGWFVCCHMIKR-----MEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHCV
        MKFFSAAI LLLLIFGTG        +      M PIV EARVCES SH+FKG+CFS TNCG+ICKTEGF GG CRGFRRRCFCTKHCV
Subjt:  MKFFSAAILLLLLIFGTGWFVCCHMIKR-----MEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHCV

TrEMBL top hitse value%identityAlignment
A0A1S4DS60 defensin Ec-AMP-D2-like2.8e-2877.38Show/hide
Query:  MKFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHCV
        MKFFSAAI LLLLIFGTG          M P+V EARVCES SH+FKGLCFS TNCGNICKTEGF+GG+CRGFRRRCFCTKHCV
Subjt:  MKFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHCV

A0A6J1JP84 defensin Ec-AMP-D2-like3.5e-2671.91Show/hide
Query:  MKFFSAAILLLLLIFGTGWFVCCHMIKR-----MEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHCV
        MKFFSAAI LLLLIFGTG        +      M PIV EARVCES SH+FKG+CFS TNCG+ICKTEGF GG CRGFRRRCFCTKHCV
Subjt:  MKFFSAAILLLLLIFGTGWFVCCHMIKR-----MEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHCV

V5LF08 Defensin-like protein 41.7e-2586.57Show/hide
Query:  FVCCHMI--KRMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHCV
        F CC       MEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGG CRGFRRRCFCTKHCV
Subjt:  FVCCHMI--KRMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHCV

V5LF72 Defensin-like protein 61.1e-3288.1Show/hide
Query:  MKFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHCV
        MKFFSAAILLLLLIFGTG          MEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHCV
Subjt:  MKFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHCV

V5LFZ0 Defensin-like protein 51.6e-3186.9Show/hide
Query:  MKFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHCV
        MKFFSAAILLLLLIFGTG          MEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTK CV
Subjt:  MKFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHCV

SwissProt top hitse value%identityAlignment
O65740 Defensin J1-22.7e-2054.88Show/hide
Query:  KFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHC
        K  +   L+++L+F TG             +V EAR CES SH FKGLCFS +NCG++C TEGF GG CRGFRRRCFCT+HC
Subjt:  KFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHC

P82659 Defensin SD28.8e-1954.76Show/hide
Query:  MKFFSAAILLLLLIFGTGWFVCCHMIKRM-EPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHC
        MK F+A +L+          V C +   M  P+VVEAR CES SH FKG C S TNC N+C +E F+GG CRGFRRRCFCT HC
Subjt:  MKFFSAAILLLLLIFGTGWFVCCHMIKRM-EPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHC

Q39182 Defensin-like protein 21.0e-1951.81Show/hide
Query:  MKFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHC
        M+  SA +++ ++   TG          M P+ VEAR CES SH FKG C S++NC N+C  EGF GG CRGFRRRCFCT+HC
Subjt:  MKFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHC

Q41914 Defensin-like protein 42.8e-1750.6Show/hide
Query:  MKFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHC
        M+  SA + L+++   TG          M P+ VEAR C S S  FKG C S TNC N+C  EGF GG CRGFRRRCFCT++C
Subjt:  MKFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHC

Q9ZUL7 Defensin-like protein 18.0e-2054.22Show/hide
Query:  MKFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHC
        ++F SAA+LL ++   TG          M P+ VEAR CES SH FKG C S+ NC N+C  EGF GG CRGFRRRC+CT+HC
Subjt:  MKFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHC

Arabidopsis top hitse value%identityAlignment
AT1G61070.1 low-molecular-weight cysteine-rich 666.1e-1548.1Show/hide
Query:  SAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHC
        ++A+LLL +I  T           M  + VEAR CE+ S+ F G C SS+NC N+C  EGF+ G CRGFRRRC CT+ C
Subjt:  SAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHC

AT2G02100.1 low-molecular-weight cysteine-rich 697.4e-2151.81Show/hide
Query:  MKFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHC
        M+  SA +++ ++   TG          M P+ VEAR CES SH FKG C S++NC N+C  EGF GG CRGFRRRCFCT+HC
Subjt:  MKFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHC

AT2G02120.1 Scorpion toxin-like knottin superfamily protein2.0e-1850.6Show/hide
Query:  MKFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHC
        M+  SA + L+++   TG          M P+ VEAR C S S  FKG C S TNC N+C  EGF GG CRGFRRRCFCT++C
Subjt:  MKFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHC

AT2G02130.1 low-molecular-weight cysteine-rich 685.7e-2154.22Show/hide
Query:  MKFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHC
        ++F SAA+LL ++   TG          M P+ VEAR CES SH FKG C S+ NC N+C  EGF GG CRGFRRRC+CT+HC
Subjt:  MKFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHC

AT5G63660.1 Scorpion toxin-like knottin superfamily protein1.5e-1345.12Show/hide
Query:  KFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHC
        KFF+A  LLL+L                E I  E R C+S SH FK +C S+ NC  +C+ EGF+GG C GF RRC+CT+ C
Subjt:  KFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTCTTTTCAGCTGCAATTTTGCTGTTGCTCCTCATTTTTGGCACTGGTTGGTTTGTTTGTTGTCATATGATCAAAAGGATGGAGCCAATTGTTGTGGAGGCAAG
GGTATGTGAATCTCTGAGCCACAGTTTCAAGGGTCTGTGCTTTAGTAGCACAAATTGTGGCAACATTTGCAAGACAGAGGGGTTTACCGGTGGCGTCTGCAGGGGCTTCC
GCCGTCGCTGCTTTTGCACAAAGCACTGTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTCTTTTCAGCTGCAATTTTGCTGTTGCTCCTCATTTTTGGCACTGGTTGGTTTGTTTGTTGTCATATGATCAAAAGGATGGAGCCAATTGTTGTGGAGGCAAG
GGTATGTGAATCTCTGAGCCACAGTTTCAAGGGTCTGTGCTTTAGTAGCACAAATTGTGGCAACATTTGCAAGACAGAGGGGTTTACCGGTGGCGTCTGCAGGGGCTTCC
GCCGTCGCTGCTTTTGCACAAAGCACTGTGTTTGAAATCTCAATAAGTAACTAATTAATTGTCTGTTTCTAGTAGACTACTTATCAACTTGTATGAATAAAGTGGCCAAT
GCCATCGTCTTTGGAGTTTGGCCTCTCCTTTCCTTTCCTTTACTTTTTATATTTTCCCCTTTTGTCTTATGCTTTAATTACATTTATGCAATCATATTATAAATGTTCGT
ATGTGTGATGTAATTTGATGCTTCATATTTTAAGGAATGGCAGAGAGTGTTTCTAAAATTGTGTTGAATTACAAGTTTAGTCTTTTG
Protein sequenceShow/hide protein sequence
MKFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHCV