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Clc01G07380 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G07380
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionDefensin-like protein 1
Genome locationClcChr01:7592480..7593314
RNA-Seq ExpressionClc01G07380
SyntenyClc01G07380
Gene Ontology termsGO:0031640 - killing of cells of other organism (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR003614 - Knottin, scorpion toxin-like
IPR008176 - Defensin, plant
IPR036574 - Knottin, scorpion toxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AHA50470.1 defensin-like protein 1 [Citrullus lanatus]3.4e-36100Show/hide
Query:  MKFFSAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCV
        MKFFSAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCV
Subjt:  MKFFSAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCV

XP_008466730.2 PREDICTED: defensin J1-2-like, partial [Cucumis melo]9.4e-3478.79Show/hide
Query:  IFTSHSKTHKLKSPFYLSLSL---NMKFFSAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCV
        IF SH  T   KS F+   +L   NMKF SAAI LLLLLL TGMGPMVT+ARTCESPS  FKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCV
Subjt:  IFTSHSKTHKLKSPFYLSLSL---NMKFFSAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCV

XP_022990902.1 defensin J1-2-like [Cucurbita maxima]1.2e-3393.24Show/hide
Query:  MKFFSAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCV
        MKFFSAAILLLLLLLATGM PM T+ARTCESPS HF+GLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCV
Subjt:  MKFFSAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCV

XP_022990903.1 defensin J1-2-like [Cucurbita maxima]9.4e-3494.59Show/hide
Query:  MKFFSAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCV
        MKFFSAAILLLLLLL TGM PM T+ARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCV
Subjt:  MKFFSAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCV

XP_023517597.1 defensin J1-2-like [Cucurbita pepo subsp. pepo]3.6e-3391.89Show/hide
Query:  MKFFSAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCV
        MKFFSAAILLLLLLL TGM PM T+ARTCESPS HF+GLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCV
Subjt:  MKFFSAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCV

TrEMBL top hitse value%identityAlignment
A0A1S3CRW6 defensin J1-2-like4.5e-3478.79Show/hide
Query:  IFTSHSKTHKLKSPFYLSLSL---NMKFFSAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCV
        IF SH  T   KS F+   +L   NMKF SAAI LLLLLL TGMGPMVT+ARTCESPS  FKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCV
Subjt:  IFTSHSKTHKLKSPFYLSLSL---NMKFFSAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCV

A0A6J1CXX5 defensin-like protein 22.9e-3366.39Show/hide
Query:  LDDSNAIVMCLIPFQSLYKPLSIFTSHSKTHKLKSPFYLSLSLNMKFFSAAILLL-LLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGF
        LD S  I   L+ F     P  +FT  S  +   +   +S SLNMKFFSAAI LL LLLL TGM PMV + RTCES SRHFKGLCFSKNNCGHVCKTEGF
Subjt:  LDDSNAIVMCLIPFQSLYKPLSIFTSHSKTHKLKSPFYLSLSLNMKFFSAAILLL-LLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGF

Query:  HGGHCRGFRRRCFCTKHCV
        HGG CRGFRRRCFCTKHC+
Subjt:  HGGHCRGFRRRCFCTKHCV

A0A6J1JK66 defensin J1-2-like5.9e-3493.24Show/hide
Query:  MKFFSAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCV
        MKFFSAAILLLLLLLATGM PM T+ARTCESPS HF+GLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCV
Subjt:  MKFFSAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCV

A0A6J1JUM8 defensin J1-2-like4.5e-3494.59Show/hide
Query:  MKFFSAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCV
        MKFFSAAILLLLLLL TGM PM T+ARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCV
Subjt:  MKFFSAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCV

V5LEQ8 Defensin-like protein 11.7e-36100Show/hide
Query:  MKFFSAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCV
        MKFFSAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCV
Subjt:  MKFFSAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCV

SwissProt top hitse value%identityAlignment
O65740 Defensin J1-22.9e-2266.67Show/hide
Query:  KFFSAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC
        K  +   L+++L+ ATG   MV +ARTCES S  FKGLCFSK+NCG VC TEGF+GGHCRGFRRRCFCT+HC
Subjt:  KFFSAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC

P82659 Defensin SD22.3e-1960Show/hide
Query:  NMKFFSAAILLLLLLLATGM-GPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC
        +MK F+A +L+++ LLA  M GP+V +ARTCES S  FKG C S  NC +VC +E F GG CRGFRRRCFCT HC
Subjt:  NMKFFSAAILLLLLLLATGM-GPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC

Q39182 Defensin-like protein 25.0e-2257.14Show/hide
Query:  LSLNMKFFSAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC
        + L+M+  SA +++ ++ +ATGMGP+  +ARTCES S  FKG C S +NC +VC  EGF GG+CRGFRRRCFCT+HC
Subjt:  LSLNMKFFSAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC

Q41914 Defensin-like protein 41.0e-1954.55Show/hide
Query:  LSLNMKFFSAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC
        +  +M+  SA + L+++ +ATGMGP+  +ARTC S S+ FKG C S  NC +VC  EGF GG CRGFRRRCFCT++C
Subjt:  LSLNMKFFSAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC

Q9ZUL7 Defensin-like protein 11.7e-2259.74Show/hide
Query:  LSLNMKFFSAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC
        + L+++F SAA+LL ++ +ATGMGP+  +ARTCES S  FKG C S +NC +VC  EGF GG CRGFRRRC+CT+HC
Subjt:  LSLNMKFFSAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC

Arabidopsis top hitse value%identityAlignment
AT1G61070.1 low-molecular-weight cysteine-rich 666.5e-1755.07Show/hide
Query:  SAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC
        ++A+LLL ++LAT MG +  +ARTCE+ S  F G C S +NC +VC  EGF  G CRGFRRRC CT+ C
Subjt:  SAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC

AT2G02100.1 low-molecular-weight cysteine-rich 693.6e-2357.14Show/hide
Query:  LSLNMKFFSAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC
        + L+M+  SA +++ ++ +ATGMGP+  +ARTCES S  FKG C S +NC +VC  EGF GG+CRGFRRRCFCT+HC
Subjt:  LSLNMKFFSAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC

AT2G02120.1 Scorpion toxin-like knottin superfamily protein7.4e-2154.55Show/hide
Query:  LSLNMKFFSAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC
        +  +M+  SA + L+++ +ATGMGP+  +ARTC S S+ FKG C S  NC +VC  EGF GG CRGFRRRCFCT++C
Subjt:  LSLNMKFFSAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC

AT2G02130.1 low-molecular-weight cysteine-rich 681.2e-2359.74Show/hide
Query:  LSLNMKFFSAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC
        + L+++F SAA+LL ++ +ATGMGP+  +ARTCES S  FKG C S +NC +VC  EGF GG CRGFRRRC+CT+HC
Subjt:  LSLNMKFFSAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC

AT2G02140.1 low-molecular-weight cysteine-rich 722.3e-1445.45Show/hide
Query:  LSLNMKFFSAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC
        + L+++  SA ++ ++LL ATGMGP+  +ARTCESPS  F+G+C +  +C   C +EGF GG C     RC+C+K C
Subjt:  LSLNMKFFSAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCGACAAAACTTAGTGCTCTATGACTCATTAAATCTTCACTTTTTTAAAAAAAAGAAAAGAAATCTTGTTTTTCTGGATGATTCTAATGCAATAGTAATGTGTTT
AATTCCCTTTCAATCTTTATATAAACCTCTTTCCATATTCACTTCTCACTCAAAAACACATAAATTAAAATCTCCTTTTTATCTCTCTCTCTCTCTCAATATGAAGTTCT
TTTCCGCTGCAATTTTGTTGCTCCTCCTGCTTCTTGCCACTGGGATGGGGCCCATGGTGACAGACGCAAGGACATGTGAATCTCCGAGCCGACACTTCAAGGGGCTGTGC
TTCAGTAAGAACAACTGTGGCCATGTCTGCAAAACGGAAGGCTTCCACGGCGGCCATTGCAGGGGCTTCCGCCGCCGGTGCTTCTGCACAAAGCACTGCGTTTGA
mRNA sequenceShow/hide mRNA sequence
TTTAAAGTCCAAAGATGTCATGTTGCGACAAAACTTAGTGCTCTATGACTCATTAAATCTTCACTTTTTTAAAAAAAAGAAAAGAAATCTTGTTTTTCTGGATGATTCTA
ATGCAATAGTAATGTGTTTAATTCCCTTTCAATCTTTATATAAACCTCTTTCCATATTCACTTCTCACTCAAAAACACATAAATTAAAATCTCCTTTTTATCTCTCTCTC
TCTCTCAATATGAAGTTCTTTTCCGCTGCAATTTTGTTGCTCCTCCTGCTTCTTGCCACTGGGATGGGGCCCATGGTGACAGACGCAAGGACATGTGAATCTCCGAGCCG
ACACTTCAAGGGGCTGTGCTTCAGTAAGAACAACTGTGGCCATGTCTGCAAAACGGAAGGCTTCCACGGCGGCCATTGCAGGGGCTTCCGCCGCCGGTGCTTCTGCACAA
AGCACTGCGTTTGAATCCACTTGAATTGAATGATCTCAAATCAGTGGTCTATTACTCAAAAGTAGACACTCATGGGAGCTTTTTGGGCGTGCGTTTAAAACCAATAAAAC
TTGCCCTCTTTTGTCTGTCATTGTTTTCTTTTTTAAGTTGTCTTTGCTTGTTATGTCAGCTTTGCTTCCAATTTGCTTTGCTAATGGTTTGAATTTATGTAATGTTGATT
CTATTATTGGTGTATGATTTCTTTGAGATTTCTTTTTTCTTTTTTTTTTT
Protein sequenceShow/hide protein sequence
MLRQNLVLYDSLNLHFFKKKKRNLVFLDDSNAIVMCLIPFQSLYKPLSIFTSHSKTHKLKSPFYLSLSLNMKFFSAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLC
FSKNNCGHVCKTEGFHGGHCRGFRRRCFCTKHCV