CuGenDBv2

Gene ID	Clc01G07600
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	FAM192A_Fyv6_N domain-containing protein
Genome location	ClcChr01:7731188..7736086
RNA-Seq Expression	Clc01G07600
Synteny	Clc01G07600
Gene Ontology terms	GO:0005634 - nucleus (cellular component)
InterPro domains	IPR019331 - FAM192A/Fyv6, N-terminal IPR039845 - PSME3-interacting protein

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

TYJ98134.1 protein FAM192A [Cucumis melo var. makuwa]

2.6e-96

95.31

Show/hide

Query:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR
        MEDES+RAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILK+NKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR
Subjt:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR

Query:  SFQAAVAAQSILLNEVREITPPAPAAQEKPSVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAEEPSKSAKTLDTNSDRPLE-AAIT
        SFQAAVAAQSILLNEVREITPPAPAAQEK SVRRETPV+RPPSMIIRVKPQAKKARIEPRSP+ AGS TEIP AKAEEPSKS KTLDTNSDRPLE AAIT
Subjt:  SFQAAVAAQSILLNEVREITPPAPAAQEKPSVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAEEPSKSAKTLDTNSDRPLE-AAIT

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

XP_004149477.1 PSME3-interacting protein [Cucumis sativus]

1.2e-93

93.9

Show/hide

Query:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR
        MEDES+RAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMA+AEEQELR
Subjt:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR

Query:  SFQAAVAAQSILLNEVREITPPAPAAQEKPSVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAEEPSKSAKTLDTNSDRPLEA-AIT
        SFQAAVAAQSILL+EVREITPPAPAAQEK SVRRETPV+RPPSMIIRVKPQAKKARIEPRSP+ AGSTTEI  AKAEE S S KTLDTNSDRPLEA AIT
Subjt:  SFQAAVAAQSILLNEVREITPPAPAAQEKPSVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAEEPSKSAKTLDTNSDRPLEA-AIT

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

XP_008466362.1 PREDICTED: protein FAM192A [Cucumis melo]

2.6e-96

95.31

Show/hide

Query:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR
        MEDES+RAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILK+NKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR
Subjt:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR

Query:  SFQAAVAAQSILLNEVREITPPAPAAQEKPSVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAEEPSKSAKTLDTNSDRPLE-AAIT
        SFQAAVAAQSILLNEVREITPPAPAAQEK SVRRETPV+RPPSMIIRVKPQAKKARIEPRSP+ AGS TEIP AKAEEPSKS KTLDTNSDRPLE AAIT
Subjt:  SFQAAVAAQSILLNEVREITPPAPAAQEKPSVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAEEPSKSAKTLDTNSDRPLE-AAIT

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

XP_022938625.1 uncharacterized protein LOC111444804 [Cucurbita moschata]

1.6e-90

90.61

Show/hide

Query:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR
        MEDESARAIRLM+FVSEEQLDEAKKTRGERVEDGTAQRDRPL+EILKENKDKRDAEFNERFKHRPPKALDEDETEFLDK ETSKREYERQMADA+EQELR
Subjt:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR

Query:  SFQAAVAAQSILLNEVREITPPAPAAQEKPSVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAEEPSKSAKTLDTNSDRPLEAAIT-
        SFQAAVAAQSILL+EVREITPPAPAAQEK  VR+ETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGS  EI +AKAEE S+S +T DT+SDRPLEAA T 
Subjt:  SFQAAVAAQSILLNEVREITPPAPAAQEKPSVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAEEPSKSAKTLDTNSDRPLEAAIT-

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

XP_023549588.1 protein FAM192A [Cucurbita pepo subsp. pepo]

1.1e-91

91.08

Show/hide

Query:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR
        MEDESARAIRLM+FVSEEQLDEAKKTRGERVEDGTAQRDRPL+EILKENKDKRDAEFNERFKHRPPKALDEDETEFLDK ETSKREYERQMADA+EQELR
Subjt:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR

Query:  SFQAAVAAQSILLNEVREITPPAPAAQEKPSVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAEEPSKSAKTLDTNSDRPLEAAIT-
        SFQAAVAAQSILL+EVREITPPAPAAQEK  VR+ETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGS  EIP+AKAEE S+S +T DT+SDRPLEAA T 
Subjt:  SFQAAVAAQSILLNEVREITPPAPAAQEKPSVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAEEPSKSAKTLDTNSDRPLEAAIT-

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KPX8 FAM192A_Fyv6_N domain-containing protein

5.7e-94

93.9

Show/hide

Query:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR
        MEDES+RAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMA+AEEQELR
Subjt:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR

Query:  SFQAAVAAQSILLNEVREITPPAPAAQEKPSVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAEEPSKSAKTLDTNSDRPLEA-AIT
        SFQAAVAAQSILL+EVREITPPAPAAQEK SVRRETPV+RPPSMIIRVKPQAKKARIEPRSP+ AGSTTEI  AKAEE S S KTLDTNSDRPLEA AIT
Subjt:  SFQAAVAAQSILLNEVREITPPAPAAQEKPSVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAEEPSKSAKTLDTNSDRPLEA-AIT

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

A0A1S3CR24 protein FAM192A

1.2e-96

95.31

Show/hide

Query:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR
        MEDES+RAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILK+NKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR
Subjt:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR

Query:  SFQAAVAAQSILLNEVREITPPAPAAQEKPSVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAEEPSKSAKTLDTNSDRPLE-AAIT
        SFQAAVAAQSILLNEVREITPPAPAAQEK SVRRETPV+RPPSMIIRVKPQAKKARIEPRSP+ AGS TEIP AKAEEPSKS KTLDTNSDRPLE AAIT
Subjt:  SFQAAVAAQSILLNEVREITPPAPAAQEKPSVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAEEPSKSAKTLDTNSDRPLE-AAIT

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

A0A5A7U2Y6 Protein FAM192A

1.2e-96

95.31

Show/hide

Query:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR
        MEDES+RAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILK+NKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR
Subjt:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR

Query:  SFQAAVAAQSILLNEVREITPPAPAAQEKPSVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAEEPSKSAKTLDTNSDRPLE-AAIT
        SFQAAVAAQSILLNEVREITPPAPAAQEK SVRRETPV+RPPSMIIRVKPQAKKARIEPRSP+ AGS TEIP AKAEEPSKS KTLDTNSDRPLE AAIT
Subjt:  SFQAAVAAQSILLNEVREITPPAPAAQEKPSVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAEEPSKSAKTLDTNSDRPLE-AAIT

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

A0A5D3BGC9 Protein FAM192A

1.2e-96

95.31

Show/hide

Query:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR
        MEDES+RAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILK+NKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR
Subjt:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR

Query:  SFQAAVAAQSILLNEVREITPPAPAAQEKPSVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAEEPSKSAKTLDTNSDRPLE-AAIT
        SFQAAVAAQSILLNEVREITPPAPAAQEK SVRRETPV+RPPSMIIRVKPQAKKARIEPRSP+ AGS TEIP AKAEEPSKS KTLDTNSDRPLE AAIT
Subjt:  SFQAAVAAQSILLNEVREITPPAPAAQEKPSVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAEEPSKSAKTLDTNSDRPLE-AAIT

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

A0A6J1FKA5 uncharacterized protein LOC111444804

7.8e-91

90.61

Show/hide

Query:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR
        MEDESARAIRLM+FVSEEQLDEAKKTRGERVEDGTAQRDRPL+EILKENKDKRDAEFNERFKHRPPKALDEDETEFLDK ETSKREYERQMADA+EQELR
Subjt:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR

Query:  SFQAAVAAQSILLNEVREITPPAPAAQEKPSVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAEEPSKSAKTLDTNSDRPLEAAIT-
        SFQAAVAAQSILL+EVREITPPAPAAQEK  VR+ETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGS  EI +AKAEE S+S +T DT+SDRPLEAA T 
Subjt:  SFQAAVAAQSILLNEVREITPPAPAAQEKPSVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAEEPSKSAKTLDTNSDRPLEAAIT-

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

SwissProt top hits

e value

%identity

Alignment

Q91WE2 PSME3-interacting protein

4.3e-06

35.65

Show/hide

Query:  EDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRD-----------RPLFEILKENKDKRDAEFNERFKHR-PPKALDEDETEFLDKLETSKREYER
        ED+S   I+   FVSE +LDE +K R E  E      D           R L+E L+E KD++  E+ E+FK +   + LDEDET FLD++   +   E+
Subjt:  EDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRD-----------RPLFEILKENKDKRDAEFNERFKHR-PPKALDEDETEFLDKLETSKREYER

Query:  QMADAEEQELRSFQA
        Q  + E +EL+ +++
Subjt:  QMADAEEQELRSFQA

Arabidopsis top hits

e value

%identity

Alignment

AT3G62140.1 CONTAINS InterPro DOMAIN/s: NEFA-interacting nuclear protein NIP30, N-terminal (InterPro:IPR019331); Has 398 Blast hits to 395 proteins in 139 species: Archae - 0; Bacteria - 6; Metazoa - 193; Fungi - 83; Plants - 36; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).

1.2e-54

57.33

Show/hide

Query:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR
        M DE+ + IRL+NFVSEEQLDE+KK RGERVEDGT QRDR L+EILKENKDK+DAEFNERFKHRPPKALDEDETEFLDKLE SKREYERQ+A+ E+++LR
Subjt:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELR

Query:  SFQAAVAAQSILLNEVRE--ITPPAPAAQEKPSVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAEEPSKSAKTLDTNSDRPLEAAI
        +FQAAVAA+S +L+E +E  + PPAP  +E+  + +  P TRP   II+VKPQ KKA+            TE  + +     K A  +D  S   ++  +
Subjt:  SFQAAVAAQSILLNEVRE--ITPPAPAAQEKPSVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAEEPSKSAKTLDTNSDRPLEAAI

Query:  TG-----------LVSYSDESEDED
        TG           LVSYSDESED+D
Subjt:  TG-----------LVSYSDESEDED

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGGATGAATCTGCGCGAGCAATTAGGCTTATGAATTTCGTCTCTGAGGAGCAGTTGGACGAAGCCAAGAAAACAAGGGGCGAACGAGTTGAGGATGGCACTGCTCA
AAGAGACAGACCCCTCTTCGAGATTTTAAAGGAAAATAAAGACAAGCGTGACGCTGAGTTTAATGAACGGTTCAAGCACAGACCACCAAAGGCTCTGGACGAGGATGAGA
CAGAATTTCTGGATAAATTGGAAACATCAAAGAGAGAATATGAAAGGCAAATGGCTGATGCAGAAGAACAAGAGCTCCGCAGTTTTCAGGCAGCTGTAGCAGCACAGTCT
ATTTTGTTGAATGAAGTGAGGGAAATAACTCCCCCTGCTCCAGCAGCTCAGGAAAAACCATCAGTTAGGAGAGAAACTCCGGTCACTCGACCGCCGAGTATGATAATTAG
AGTAAAGCCACAAGCAAAGAAAGCTAGGATCGAACCTAGAAGCCCAGAAAAAGCTGGTAGCACAACTGAAATCCCTGATGCCAAAGCAGAGGAGCCTTCAAAATCAGCAA
AAACACTTGATACCAATAGTGATAGGCCGCTTGAAGCTGCTATAACAGGACTAGTTTCGTATAGTGATGAAAGTGAAGATGAAGATTAG

mRNA sequence

Show/hide mRNA sequence

TTTAAAACATGATTTAAAGAGATGAATTAATTTAGTAGTAGAAAATCAAACATGTAATTATATGAATTGGGCTCGATTCGGTGGGATTCTTCATCAGAGCTGCATAAAGC
ATTGTAATGGAGAAAGTCGAAAGAGGCAAGAAAAAAACTTGCAGGGAAGTGACTTTGTAATATCATAATCCCTTTTTGGCCTTTTCTTTTCGGTGAAATCTTGAAGTGTT
GGAACTGGACGGCAAGCGAGAATGGAGGATGAATCTGCGCGAGCAATTAGGCTTATGAATTTCGTCTCTGAGGAGCAGTTGGACGAAGCCAAGAAAACAAGGGGCGAACG
AGTTGAGGATGGCACTGCTCAAAGAGACAGACCCCTCTTCGAGATTTTAAAGGAAAATAAAGACAAGCGTGACGCTGAGTTTAATGAACGGTTCAAGCACAGACCACCAA
AGGCTCTGGACGAGGATGAGACAGAATTTCTGGATAAATTGGAAACATCAAAGAGAGAATATGAAAGGCAAATGGCTGATGCAGAAGAACAAGAGCTCCGCAGTTTTCAG
GCAGCTGTAGCAGCACAGTCTATTTTGTTGAATGAAGTGAGGGAAATAACTCCCCCTGCTCCAGCAGCTCAGGAAAAACCATCAGTTAGGAGAGAAACTCCGGTCACTCG
ACCGCCGAGTATGATAATTAGAGTAAAGCCACAAGCAAAGAAAGCTAGGATCGAACCTAGAAGCCCAGAAAAAGCTGGTAGCACAACTGAAATCCCTGATGCCAAAGCAG
AGGAGCCTTCAAAATCAGCAAAAACACTTGATACCAATAGTGATAGGCCGCTTGAAGCTGCTATAACAGGACTAGTTTCGTATAGTGATGAAAGTGAAGATGAAGATTAG
ACAATTAAGTTAGCTATTAGAATTTCCGAAACAATCACCATGTTGTATTTAATTTTTTGTGTTGAGTTTCTGAAATGATGAATCTTTTCCTGTAGCTTGTCAACATTGAT
TATATATGTACATCTTCTAACCGTTCATTGTTAAAATATTTTAGACAATCCTGAAGGTTAATTTTTTATGAAATATTTAGAGCCTGGTTTTCCATTGTCGC

Protein sequence

Show/hide protein sequence

MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELRSFQAAVAAQS
ILLNEVREITPPAPAAQEKPSVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAEEPSKSAKTLDTNSDRPLEAAITGLVSYSDESEDED

Clc01G07600 (gene) of Watermelon (cordophanus) v2 genome