; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc01G08340 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G08340
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionmitochondrial intermembrane space import and assembly protein 40 homolog
Genome locationClcChr01:8547036..8552114
RNA-Seq ExpressionClc01G08340
SyntenyClc01G08340
Gene Ontology termsGO:0006625 - protein targeting to peroxisome (biological process)
GO:0022417 - protein maturation by protein folding (biological process)
GO:0045041 - protein import into mitochondrial intermembrane space (biological process)
GO:0005758 - mitochondrial intermembrane space (cellular component)
GO:0005777 - peroxisome (cellular component)
GO:0015035 - protein disulfide oxidoreductase activity (molecular function)
InterPro domainsIPR039289 - Mitochondrial intermembrane space import and assembly protein 40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150196.1 mitochondrial intermembrane space import and assembly protein 40 homolog [Cucumis sativus]1.7e-7391.19Show/hide
Query:  MGQAESVAAVSSPNDLPQSRNSSASPVSGPPSMESLIAEAAAYGNETNESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFV
        MGQAESVAAVS PNDLP S N SASPVSGPPSMESLIAEA AYGNETNESLDAKANRALECPCIADLRKG CG+QFSDAFLCFFKSTAEEKGSDCVHPFV
Subjt:  MGQAESVAAVSSPNDLPQSRNSSASPVSGPPSMESLIAEAAAYGNETNESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFV

Query:  ALQSCIKANPNAFSKDILDEDEDEEEKEREKVKAEEPTQDYRVVPPSWSREPQTPKSKL
        ALQSCIKANPNAFSKD+LDEDE+E+E E+EKVK EEPTQDYRVVPPSWSREPQ PKSKL
Subjt:  ALQSCIKANPNAFSKDILDEDEDEEEKEREKVKAEEPTQDYRVVPPSWSREPQTPKSKL

XP_008465292.1 PREDICTED: mitochondrial intermembrane space import and assembly protein 40 [Cucumis melo]5.3e-7088.34Show/hide
Query:  MGQAESVAAVSSPNDLPQSRNSSASPV----SGPPSMESLIAEAAAYGNETNESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCV
        MGQAESVAAVS PNDLP S N SASPV    SGPPSMESLIAEA AYGNETNESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCV
Subjt:  MGQAESVAAVSSPNDLPQSRNSSASPV----SGPPSMESLIAEAAAYGNETNESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCV

Query:  HPFVALQSCIKANPNAFSKDILDEDEDEEEKEREKVKAEEPTQDYRVVPPSWSREPQTPKSKL
        HPFVALQSCIKANPNAFSKDILD+DE+    E+EKVK EEPTQDYRV+PPSWSREPQ PKSKL
Subjt:  HPFVALQSCIKANPNAFSKDILDEDEDEEEKEREKVKAEEPTQDYRVVPPSWSREPQTPKSKL

XP_022990891.1 mitochondrial intermembrane space import and assembly protein 40 homolog [Cucurbita maxima]3.6e-7187.73Show/hide
Query:  MGQAESVAAVSSPNDLPQSRNSSASPVSG----PPSMESLIAEAAAYGNETNESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCV
        MGQ ESVAA SS NDLPQSRN S SPVSG     PSMESLIAEAAAYGNE NESL+AKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCV
Subjt:  MGQAESVAAVSSPNDLPQSRNSSASPVSG----PPSMESLIAEAAAYGNETNESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCV

Query:  HPFVALQSCIKANPNAFSKDILDEDEDEEEKEREKVKAEEPTQDYRVVPPSWSREPQTPKSKL
        HPFVALQSCIKANPNAFSKD+LDE+E+EEE+EREK KAEEPTQDYR++PPSWSREPQ PKSKL
Subjt:  HPFVALQSCIKANPNAFSKDILDEDEDEEEKEREKVKAEEPTQDYRVVPPSWSREPQTPKSKL

XP_023529662.1 mitochondrial intermembrane space import and assembly protein 40 homolog [Cucurbita pepo subsp. pepo]2.4e-7087.2Show/hide
Query:  MGQAESVAAVSSPNDLPQSRNSSASPVSG----PPSMESLIAEAAAYGNETNESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCV
        MGQ ESVAA SSPNDLPQSRN S SPVSG     PSM+SLIAEAAAYGNE NESL+AKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCV
Subjt:  MGQAESVAAVSSPNDLPQSRNSSASPVSG----PPSMESLIAEAAAYGNETNESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCV

Query:  HPFVALQSCIKANPNAFSKDILDEDEDE-EEKEREKVKAEEPTQDYRVVPPSWSREPQTPKSKL
        HPFVALQSCIKANPNAFSKD+LDE+E+E EE+EREK KAEEPTQDYR++PPSWSREPQ PKSKL
Subjt:  HPFVALQSCIKANPNAFSKDILDEDEDE-EEKEREKVKAEEPTQDYRVVPPSWSREPQTPKSKL

XP_038875961.1 mitochondrial intermembrane space import and assembly protein 40 homolog [Benincasa hispida]7.8e-7492.07Show/hide
Query:  MGQAESVAAVSSPNDLPQSRNSSASPVSG-----PPSMESLIAEAAAYGNETNESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDC
        MGQ ESVAAVSSPNDLPQSRNSSA+PVS      PPSMESLIAEAAAYGNETNESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDC
Subjt:  MGQAESVAAVSSPNDLPQSRNSSASPVSG-----PPSMESLIAEAAAYGNETNESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDC

Query:  VHPFVALQSCIKANPNAFSKDILDEDEDEEEKEREKVKAEEPTQDYRVVPPSWSREPQTPKSKL
        VHPFVALQSCIKANPNAFSKDILD DEDEEEKEREK KAE+PTQDYRV+PPSWSREPQ PKSKL
Subjt:  VHPFVALQSCIKANPNAFSKDILDEDEDEEEKEREKVKAEEPTQDYRVVPPSWSREPQTPKSKL

TrEMBL top hitse value%identityAlignment
A0A1S3CNJ8 mitochondrial intermembrane space import and assembly protein 402.5e-7088.34Show/hide
Query:  MGQAESVAAVSSPNDLPQSRNSSASPV----SGPPSMESLIAEAAAYGNETNESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCV
        MGQAESVAAVS PNDLP S N SASPV    SGPPSMESLIAEA AYGNETNESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCV
Subjt:  MGQAESVAAVSSPNDLPQSRNSSASPV----SGPPSMESLIAEAAAYGNETNESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCV

Query:  HPFVALQSCIKANPNAFSKDILDEDEDEEEKEREKVKAEEPTQDYRVVPPSWSREPQTPKSKL
        HPFVALQSCIKANPNAFSKDILD+DE+    E+EKVK EEPTQDYRV+PPSWSREPQ PKSKL
Subjt:  HPFVALQSCIKANPNAFSKDILDEDEDEEEKEREKVKAEEPTQDYRVVPPSWSREPQTPKSKL

A0A5A7VG35 Mitochondrial intermembrane space import and assembly protein 407.0e-5291.89Show/hide
Query:  ESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKDILDEDEDEEEKEREKVKAEEPTQDYRVVPPSW
        +SLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKDILD+DE+E+E E+EKVK EEPTQDYRV+PPSW
Subjt:  ESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKDILDEDEDEEEKEREKVKAEEPTQDYRVVPPSW

Query:  SREPQTPKSKL
        SREPQ PKSKL
Subjt:  SREPQTPKSKL

A0A6J1CJ21 mitochondrial intermembrane space import and assembly protein 40 homolog3.7e-6985.89Show/hide
Query:  MGQAESVAAVSSPNDLPQSRNSSASPVSG----PPSMESLIAEAAAYGNETNESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCV
        MGQAESVAA S PNDLPQSRNS+A+PVS     PPSM+SLIAEAAAYGNE NESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCV
Subjt:  MGQAESVAAVSSPNDLPQSRNSSASPVSG----PPSMESLIAEAAAYGNETNESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCV

Query:  HPFVALQSCIKANPNAFSKDILDEDEDEEEKEREKVKAEEPTQDYRVVPPSWSREPQTPKSKL
        HPFVALQSCIKANPNAFSKDILDE   EE++E+EK KAEEP +DYR++PPSWSREPQ PKSKL
Subjt:  HPFVALQSCIKANPNAFSKDILDEDEDEEEKEREKVKAEEPTQDYRVVPPSWSREPQTPKSKL

A0A6J1H043 mitochondrial intermembrane space import and assembly protein 40 homolog4.1e-6885.98Show/hide
Query:  MGQAESV-AAVSSPNDLPQSRNSSASPVSG----PPSMESLIAEAAAYGNETNESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDC
        MGQ ESV AA SSPNDLPQSRN S SPVSG     PSMESLIAEAAAYGNE NESL+AKANRALECPCIADLRKGPCGVQFSDAF CFFKSTAEEKGSDC
Subjt:  MGQAESV-AAVSSPNDLPQSRNSSASPVSG----PPSMESLIAEAAAYGNETNESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDC

Query:  VHPFVALQSCIKANPNAFSKDILDEDEDEEEKEREKVKAEEPTQDYRVVPPSWSREPQTPKSKL
        VHPFVALQSCIKANPNAFSKD+LDE+E+EE  EREK KAEEPT+DYR++PPSWSREPQ PKSKL
Subjt:  VHPFVALQSCIKANPNAFSKDILDEDEDEEEKEREKVKAEEPTQDYRVVPPSWSREPQTPKSKL

A0A6J1JP76 mitochondrial intermembrane space import and assembly protein 40 homolog1.8e-7187.73Show/hide
Query:  MGQAESVAAVSSPNDLPQSRNSSASPVSG----PPSMESLIAEAAAYGNETNESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCV
        MGQ ESVAA SS NDLPQSRN S SPVSG     PSMESLIAEAAAYGNE NESL+AKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCV
Subjt:  MGQAESVAAVSSPNDLPQSRNSSASPVSG----PPSMESLIAEAAAYGNETNESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCV

Query:  HPFVALQSCIKANPNAFSKDILDEDEDEEEKEREKVKAEEPTQDYRVVPPSWSREPQTPKSKL
        HPFVALQSCIKANPNAFSKD+LDE+E+EEE+EREK KAEEPTQDYR++PPSWSREPQ PKSKL
Subjt:  HPFVALQSCIKANPNAFSKDILDEDEDEEEKEREKVKAEEPTQDYRVVPPSWSREPQTPKSKL

SwissProt top hitse value%identityAlignment
Q4WGL2 Mitochondrial intermembrane space import and assembly protein 401.0e-1234.96Show/hide
Query:  QAESVAAVSSPNDLP---QSRNSSASPVSGPPSMESLIAEAAAYGNETNESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPF
        QAES  AVS P+  P   ++ ++S + +  P  +E    + AA+  ET E          +CPC+  +  GPCG +F  AF CF  ST E KG DC+  F
Subjt:  QAESVAAVSSPNDLP---QSRNSSASPVSGPPSMESLIAEAAAYGNETNESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPF

Query:  VALQSCIKANPNAFSKDILDEDE
          +Q C +  P+ +  ++ D+DE
Subjt:  VALQSCIKANPNAFSKDILDEDE

Q6PBC3 Mitochondrial intermembrane space import and assembly protein 405.2e-1238.1Show/hide
Query:  PSMESLIAEAAAYGNETNESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKDILDEDEDEEEKERE
        PS   LIA+      E +  +    +    CPC+  +  GPCG QF  AF CF  S  E KGSDC+  F A+Q C++  P+ + +   ++DEDE EKE++
Subjt:  PSMESLIAEAAAYGNETNESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKDILDEDEDEEEKERE

Query:  KVKAE
          +AE
Subjt:  KVKAE

Q7XKI7 Mitochondrial intermembrane space import and assembly protein 40 homolog5.7e-3551.61Show/hide
Query:  MGQAESVAAVS----SPNDLPQSRNSSASPVSGPPSMESLIAEAAAYGNETNESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCV
        MGQ  S  A +    SP  +  + +SS SP   P S+E+L AEA ++  + NES+D K  +AL+CPC+A+L+ GPCG QF DAF CF KST EEKGSDCV
Subjt:  MGQAESVAAVS----SPNDLPQSRNSSASPVSGPPSMESLIAEAAAYGNETNESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCV

Query:  HPFVALQSCIKANPNAFSKDILDEDEDEEEKEREKVKAEEPTQDYRVVPPSWSRE
         PF+ALQ CIK NP AFSK+IL+E+E++EE E+  +K         V  P+WSRE
Subjt:  HPFVALQSCIKANPNAFSKDILDEDEDEEEKEREKVKAEEPTQDYRVVPPSWSRE

Q8GYJ4 Mitochondrial intermembrane space import and assembly protein 40 homolog3.1e-4157.49Show/hide
Query:  MGQAE----SVAAVSSPNDLPQSRNSSA-SPVSGPPSMESLIAEAAAYGNE--TNESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGS
        MGQA+    S+   ++ N  P S NS   S  +  PSM+SL+AEAAAYG +   NESL+AKA RAL+CPCIADLR G CG QFS+AFLCF KSTAEEKGS
Subjt:  MGQAE----SVAAVSSPNDLPQSRNSSA-SPVSGPPSMESLIAEAAAYGNE--TNESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGS

Query:  DCVHPFVALQSCIKANPNAFSKDILDEDEDEEEKEREKVKAEEPTQDYRVVPPSWSRE-PQTPKSKL
        DCV+PFVALQSCI ANP+AFSK +       +EKE EK + + P QD+R++PP W+++ P++  SKL
Subjt:  DCVHPFVALQSCIKANPNAFSKDILDEDEDEEEKEREKVKAEEPTQDYRVVPPSWSRE-PQTPKSKL

Q8N4Q1 Mitochondrial intermembrane space import and assembly protein 401.6e-1343.4Show/hide
Query:  PSMESLIAEAAAYGNETNESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKDILDEDEDEEEKERE
        PS   L+A+      E +  +    N    CPC+  +  GPCG QF  AF CF  ST E KGSDCV  F A+Q C++  P+ + +    EDEDEEE ERE
Subjt:  PSMESLIAEAAAYGNETNESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKDILDEDEDEEEKERE

Query:  KVKAEE
        K  AE+
Subjt:  KVKAEE

Arabidopsis top hitse value%identityAlignment
AT5G23395.1 Cox19-like CHCH family protein2.2e-4257.49Show/hide
Query:  MGQAE----SVAAVSSPNDLPQSRNSSA-SPVSGPPSMESLIAEAAAYGNE--TNESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGS
        MGQA+    S+   ++ N  P S NS   S  +  PSM+SL+AEAAAYG +   NESL+AKA RAL+CPCIADLR G CG QFS+AFLCF KSTAEEKGS
Subjt:  MGQAE----SVAAVSSPNDLPQSRNSSA-SPVSGPPSMESLIAEAAAYGNE--TNESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGS

Query:  DCVHPFVALQSCIKANPNAFSKDILDEDEDEEEKEREKVKAEEPTQDYRVVPPSWSRE-PQTPKSKL
        DCV+PFVALQSCI ANP+AFSK +       +EKE EK + + P QD+R++PP W+++ P++  SKL
Subjt:  DCVHPFVALQSCIKANPNAFSKDILDEDEDEEEKEREKVKAEEPTQDYRVVPPSWSRE-PQTPKSKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCAAGCTGAAAGCGTCGCCGCCGTATCGTCTCCGAACGATCTACCTCAAAGCCGGAATTCATCTGCAAGTCCCGTCTCCGGTCCTCCCTCCATGGAGTCTCTAAT
TGCAGAAGCTGCAGCTTATGGTAATGAAACAAATGAGTCTCTTGATGCCAAAGCTAACAGAGCGTTAGAGTGCCCCTGCATAGCTGACTTGCGTAAAGGTCCATGCGGGG
TCCAGTTTTCTGATGCTTTTCTTTGCTTCTTCAAGAGTACTGCAGAGGAAAAGGGATCGGACTGTGTGCATCCTTTTGTGGCTTTGCAGAGCTGCATAAAAGCAAACCCA
AATGCATTCTCGAAGGATATCTTGGACGAAGATGAAGATGAAGAAGAAAAAGAAAGGGAAAAAGTAAAGGCTGAAGAGCCAACTCAAGATTACAGAGTCGTTCCTCCTTC
ATGGTCTAGAGAACCTCAAACTCCCAAGTCCAAGCTGTAA
mRNA sequenceShow/hide mRNA sequence
TAAAAGGAAAAGTCATTTTTCTTCAATCCACTTTTCAAAGTTTAAACCTTCTATTAACCTTCTATTACAACGACCGCCCACTTTTCTACCGGTTCCAATTTGAGTTCGGA
GAAGGATGGGTCAAGCTGAAAGCGTCGCCGCCGTATCGTCTCCGAACGATCTACCTCAAAGCCGGAATTCATCTGCAAGTCCCGTCTCCGGTCCTCCCTCCATGGAGTCT
CTAATTGCAGAAGCTGCAGCTTATGGTAATGAAACAAATGAGTCTCTTGATGCCAAAGCTAACAGAGCGTTAGAGTGCCCCTGCATAGCTGACTTGCGTAAAGGTCCATG
CGGGGTCCAGTTTTCTGATGCTTTTCTTTGCTTCTTCAAGAGTACTGCAGAGGAAAAGGGATCGGACTGTGTGCATCCTTTTGTGGCTTTGCAGAGCTGCATAAAAGCAA
ACCCAAATGCATTCTCGAAGGATATCTTGGACGAAGATGAAGATGAAGAAGAAAAAGAAAGGGAAAAAGTAAAGGCTGAAGAGCCAACTCAAGATTACAGAGTCGTTCCT
CCTTCATGGTCTAGAGAACCTCAAACTCCCAAGTCCAAGCTGTAACTCATATCATCAGCTTCCATTTTGTCTATCCTGGTTTCAAGAATCAATTTGTGCAATAAGTTGAT
CCAAGACAGTAGGATCTGCAAGTGTTGAGGCTTTCTCGAAGCTCTTCACTTTGAGGAACTCCCTCAACTAGTGTAACGAATGCATGAATACTCTGCCCTTTAACCTGAAG
ACAAGAGAAAGGTTAAATTATAAAATTCAGTCCCTAAACTTTTGATTTACATTTCTATGGAGCTCTTGTTTTAAGAGTGTCTATCGAACCAACGCTGGTTGATTCGATAC
GACATAATAGAGATCACAGTGGCATAAGGAAGTCGACATTTGAACAAAATAGAAATTGTTTTGTGACCTCATGCTCAATGCCAATCACTGCAGCTTCTGCACACTGAGGG
TGTGAAACTAACGCAGATTCCACTTCTGCTGTCCCAATTCGATGCCCACTGCATAATATATAAAGTTTTTAGACCATATTTTATTTGTCTTAACTCCTAAATTTTTAGTT
TTTTTGTCGATAAATTCAAATATATCCCGAAGAGAAGTTAAGAACTAAACAAAAGATTAAGTTCAAGGACTAAAAATAAAATAAACTCGAAATGATAGAGATTTATAAGA
TTTTAACCTGGCATGAAAAGTAGTTTCTTTTTCATTATTATTTGATTCTATGATCAATCTTAACATGCATTAGTGGATGTAAAAAACGCAAA
Protein sequenceShow/hide protein sequence
MGQAESVAAVSSPNDLPQSRNSSASPVSGPPSMESLIAEAAAYGNETNESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANP
NAFSKDILDEDEDEEEKEREKVKAEEPTQDYRVVPPSWSREPQTPKSKL