; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc01G08620 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G08620
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionDEAD-box ATP-dependent RNA helicase 38-like
Genome locationClcChr01:8912636..8924879
RNA-Seq ExpressionClc01G08620
SyntenyClc01G08620
Gene Ontology termsGO:0016973 - poly(A)+ mRNA export from nucleus (biological process)
GO:0005634 - nucleus (cellular component)
GO:0010494 - cytoplasmic stress granule (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003724 - RNA helicase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR001650 - Helicase, C-terminal
IPR011545 - DEAD/DEAH box helicase domain
IPR014001 - Helicase superfamily 1/2, ATP-binding domain
IPR014014 - RNA helicase, DEAD-box type, Q motif
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150128.2 DEAD-box ATP-dependent RNA helicase 38 [Cucumis sativus]5.4e-21180.16Show/hide
Query:  TSDESTTATVTVGSSSAP-----PVPKRAWGDEDDD-----------VGEHLESLTI----NLEEPVDSDI-SVTTGDTPYTSASSFEDLNLSQELLKGL
        TS  +  A  T  SSSAP     PVPKRAWGDE+DD             E+LESL I    NLEEP+DS+I +VTTGDTPY+SAS+FEDLNLS+ELLKGL
Subjt:  TSDESTTATVTVGSSSAP-----PVPKRAWGDEDDD-----------VGEHLESLTI----NLEEPVDSDI-SVTTGDTPYTSASSFEDLNLSQELLKGL

Query:  YVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSANYVP
        YVEM+FHKPSKIQAI+LPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSANY+P
Subjt:  YVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSANYVP

Query:  MSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYNQLFVKK
        MSKRPPITAQVVIGTPGTIKKWMSSRKLGVS VKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVV KDYNQLFVKK
Subjt:  MSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYNQLFVKK

Query:  EELSLESVKQYKLICPDELTKIRLIKDRIFELADKL--------------------------------------------EFKDGLTKVLISTDLLARGF
        EELSLESVKQYKLICPDELTKIR+IKDRIFELADKL                                            EFKDGLTKVLISTDLLARGF
Subjt:  EELSLESVKQYKLICPDELTKIRLIKDRIFELADKL--------------------------------------------EFKDGLTKVLISTDLLARGF

Query:  DQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEIIDVRDSDQDIQAALKTAGLV
        DQQQVNLVINYDLPLKYE SPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIM MDKIQNHF SEII+VRDS+ DIQ ALK AGLV
Subjt:  DQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEIIDVRDSDQDIQAALKTAGLV

XP_008463114.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like [Cucumis melo]1.4e-21180.64Show/hide
Query:  ATSDES-TTATVTVGSSSAP-----PVPKRAWGDEDDD-----------VGEHLESLTI----NLEEPVDSDI-SVTTGDTPYTSASSFEDLNLSQELLK
        +TSD S   A VT  SSSAP     PVPKRAWGDE+DD             E+LESL I    NLEEP+DS+I +VTTGDTPY+SAS+FEDLNLS+ELLK
Subjt:  ATSDES-TTATVTVGSSSAP-----PVPKRAWGDEDDD-----------VGEHLESLTI----NLEEPVDSDI-SVTTGDTPYTSASSFEDLNLSQELLK

Query:  GLYVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSANY
        GLYVEM+FHKPSKIQAI+LPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSANY
Subjt:  GLYVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSANY

Query:  VPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYNQLFV
        +PMSKRPPITAQVVIGTPGTIKKWMSSRKLGVS VKILVFDEADHMLGEDGFQDDSLRIMRDIERSS HCQVLLFSATFDENVKNFVSRVV KDYNQLFV
Subjt:  VPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYNQLFV

Query:  KKEELSLESVKQYKLICPDELTKIRLIKDRIFELADKL--------------------------------------------EFKDGLTKVLISTDLLAR
        KKEELSLESVKQYKLICPDELTKIR+IKDRIFELADKL                                            EFKDGLTKVLISTDLLAR
Subjt:  KKEELSLESVKQYKLICPDELTKIRLIKDRIFELADKL--------------------------------------------EFKDGLTKVLISTDLLAR

Query:  GFDQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEIIDVRDSDQDIQAALKTAGL
        GFDQQQVNLVINYDLPLKYE SPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIM MDKIQNHF SEII+VRDSD+DIQAALK AGL
Subjt:  GFDQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEIIDVRDSDQDIQAALKTAGL

Query:  V
        V
Subjt:  V

XP_022935217.1 DEAD-box ATP-dependent RNA helicase 38 [Cucurbita moschata]1.5e-20075.84Show/hide
Query:  PATSDESTT------ATVTVGSSSAP---PVPKRAWGD-EDDDVG----------EHLESLTI----NLEEPVDSDI-SVTTGDTPYTSASSFEDLNLSQ
        PA  D +T+      A V V +++ P   PVPKRAWGD EDDDVG          E++ESL I     LEEP DS+I +VTTGDTPY+SAS+FEDLNLS 
Subjt:  PATSDESTT------ATVTVGSSSAP---PVPKRAWGD-EDDDVG----------EHLESLTI----NLEEPVDSDI-SVTTGDTPYTSASSFEDLNLSQ

Query:  ELLKGLYVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPAD
        E+LKGLYVEM+F KPSKIQAI+LPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPAD
Subjt:  ELLKGLYVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPAD

Query:  SANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYN
        SANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVS VKILVFDEADHML EDGF+DDSLRIMRDIE+SSPHCQVLLFSATFDE VKNFVSRVV KDYN
Subjt:  SANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYN

Query:  QLFVKKEELSLESVKQYKLICPDELTKIRLIKDRIFELADKL--------------------------------------------EFKDGLTKVLISTD
        QLFVKKEELSLE VKQYK+ICPDEL KIR+IKDRIFEL +KL                                            EFKDGLTKVLISTD
Subjt:  QLFVKKEELSLESVKQYKLICPDELTKIRLIKDRIFELADKL--------------------------------------------EFKDGLTKVLISTD

Query:  LLARGFDQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEIIDVRDSDQDIQAALK
        LL+RGFDQQQVNLVINYDLPLKYESS +A K+RSSS SEPNYEVYLHRIGRAGRFGRKGAVFNLLCGD EIM+MDKIQNHF SE+ +VRDSD+DIQAAL+
Subjt:  LLARGFDQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEIIDVRDSDQDIQAALK

Query:  TAGLV
        TAGL+
Subjt:  TAGLV

XP_038876100.1 DEAD-box ATP-dependent RNA helicase 38-like [Benincasa hispida]1.4e-21481.67Show/hide
Query:  ATSDESTT---ATVTVGSSSAP----PVPKRAWGD-EDDDVG----------EHLESLTI----NLEEPVDSDI-SVTTGDTPYTSASSFEDLNLSQELL
        A +D STT   A  TVGSSSAP    PVPKRAWGD EDDDVG          E+LESL I    NLEEP+DS+I +VTTGDTPYTSAS+FEDLNLS+ELL
Subjt:  ATSDESTT---ATVTVGSSSAP----PVPKRAWGD-EDDDVG----------EHLESLTI----NLEEPVDSDI-SVTTGDTPYTSASSFEDLNLSQELL

Query:  KGLYVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSAN
        KGLYVEM+FHKPSKIQAI+LPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGIT ECAVPADSAN
Subjt:  KGLYVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSAN

Query:  YVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYNQLF
        YVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGV SVKILVFDEADHMLGEDGFQDDSLRIMRDIERS+PHCQVLLFSATFDENVKNFVSRVV KDYNQLF
Subjt:  YVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYNQLF

Query:  VKKEELSLESVKQYKLICPDELTKIRLIKDRIFELADKL--------------------------------------------EFKDGLTKVLISTDLLA
        VKKEELSLESVKQYKLICPDEL KIR+IKDRIFELADKL                                            EFKDGLTKVLISTDLLA
Subjt:  VKKEELSLESVKQYKLICPDELTKIRLIKDRIFELADKL--------------------------------------------EFKDGLTKVLISTDLLA

Query:  RGFDQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEIIDVRDSDQDIQAALKTAG
        RGFDQQQVNLVINYDLPLKYESS QATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIM+M+KIQNHFGSEII+VRDSD+DIQAALKTAG
Subjt:  RGFDQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEIIDVRDSDQDIQAALKTAG

Query:  LV
        LV
Subjt:  LV

XP_038906287.1 DEAD-box ATP-dependent RNA helicase 38 [Benincasa hispida]3.9e-20978.21Show/hide
Query:  AGHQPKNFSTMELPATSDESTTATVTVGSSSAP----PVPKRAWGD-EDDDVG----------EHLESLTI-----NLEEPVDSDI-SVTTGDTPYTSAS
        A H   + +T +  A++  + TAT T GSSSAP    PVPKRAWGD EDDDVG          E+LESL I      L+EP+DS+I +VTTG TPYTSAS
Subjt:  AGHQPKNFSTMELPATSDESTTATVTVGSSSAP----PVPKRAWGD-EDDDVG----------EHLESLTI-----NLEEPVDSDI-SVTTGDTPYTSAS

Query:  SFEDLNLSQELLKGLYVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGI
        +FEDLNLS+ELLKGLYVEMRFHKPSKIQAI+LPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGI
Subjt:  SFEDLNLSQELLKGLYVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGI

Query:  TSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFV
        TSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVS V+ILVFDEADHMLGEDGFQDDSLRIM+DIERSSPHCQVLLFSATFDENVK FV
Subjt:  TSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFV

Query:  SRVVKKDYNQLFVKKEELSLESVKQYKLICPDELTKIRLIKDRIFELADKL--------------------------------------------EFKDG
        SRVV KDYNQLFVKKEELSLESVKQ+KLICPDELTKIR+IKDRIFELADKL                                            EFKDG
Subjt:  SRVVKKDYNQLFVKKEELSLESVKQYKLICPDELTKIRLIKDRIFELADKL--------------------------------------------EFKDG

Query:  LTKVLISTDLLARGFDQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEIIDVRDS
        LTKVLISTDLLARGFDQQQVNLVINYDLPLK+E S QATKYRSSS S+PNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEI +MDKIQ HFGSEII+VRDS
Subjt:  LTKVLISTDLLARGFDQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEIIDVRDS

Query:  DQDIQAALKTAGLV
        D+DIQAALKTAGLV
Subjt:  DQDIQAALKTAGLV

TrEMBL top hitse value%identityAlignment
A0A0A0LDT3 Uncharacterized protein1.8e-19675.15Show/hide
Query:  TSDESTTATVTVGSSSAP----PVPKRAWGDEDD-----DVG-------EHLESLTI----NLEEPVDSDI-SVTTGDTPYTSASSFEDLNLSQELLKGL
        T+D    AT+T   ++AP    P+PKR WGDE+      D G       E +ESL I     LEEP+DS+I +VTTGDTPY+SAS+FEDLNLS+ELLKGL
Subjt:  TSDESTTATVTVGSSSAP----PVPKRAWGDEDD-----DVG-------EHLESLTI----NLEEPVDSDI-SVTTGDTPYTSASSFEDLNLSQELLKGL

Query:  YVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSANYVP
        YVEMRFHKPSKIQAI+LPMILTPPYK LIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSANY+P
Subjt:  YVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSANYVP

Query:  MSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYNQLFVKK
        +SKRPP TAQVVIGTPGTIKKWMS RKLGVS VKILVFDEADHMLGEDGFQD SLRIMRDIERSS H QVLLFSATFDENVKNFVSRVV KDYNQLFVKK
Subjt:  MSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYNQLFVKK

Query:  EELSLESVKQYKLICPDELTKIRLIKDRIFELADKL--------------------------------------------EFKDGLTKVLISTDLLARGF
        EELSLESVKQ+KLICP+E TKIR+IKDRIFELADKL                                            EFKDGLTKVLISTDLLARGF
Subjt:  EELSLESVKQYKLICPDELTKIRLIKDRIFELADKL--------------------------------------------EFKDGLTKVLISTDLLARGF

Query:  DQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEIIDVRDSDQDIQAALKTAGLV
        DQQQVNLVINYDLPLK++ S QA KYRSSS SEPN+EVYLHRIGRAGRFGRKGAVFNLLCGD+EI +MDKIQ HFGSE+I+VRD+D+DI+AALK+AGL+
Subjt:  DQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEIIDVRDSDQDIQAALKTAGLV

A0A1S3B601 DEAD-box ATP-dependent RNA helicase 381.6e-20075.95Show/hide
Query:  TSDESTTATVTVGSSSAP----PVPKRAWGDEDDD------------VGEHLESLTI----NLEEPVDSDI-SVTTGDTPYTSASSFEDLNLSQELLKGL
        ++  S  AT+T   S+AP    P+PKR+WG+E+DD              E +ESL I     LEEP+DS+I +VTTGDTPY+SAS+FEDLNLS+ELLKGL
Subjt:  TSDESTTATVTVGSSSAP----PVPKRAWGDEDDD------------VGEHLESLTI----NLEEPVDSDI-SVTTGDTPYTSASSFEDLNLSQELLKGL

Query:  YVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSANYVP
        YVEMRFHKPSKIQAI+LPMILTPPYK LIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSANY+P
Subjt:  YVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSANYVP

Query:  MSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYNQLFVKK
        +SKRPPITAQVVIGTPGTIKKWMS RKLGVS VKILVFDEADHMLGEDGFQDDSLRIMRDIERSS HCQVLLFSATFDENVKNFVSRVV KDYNQLFVKK
Subjt:  MSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYNQLFVKK

Query:  EELSLESVKQYKLICPDELTKIRLIKDRIFELADKL--------------------------------------------EFKDGLTKVLISTDLLARGF
        EELSLESVKQ+KLICP+E TKIR+IKDRIFELADKL                                            EFKDGLTKVLISTDLLARGF
Subjt:  EELSLESVKQYKLICPDELTKIRLIKDRIFELADKL--------------------------------------------EFKDGLTKVLISTDLLARGF

Query:  DQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEIIDVRDSDQDIQAALKTAGLV
        DQQQVNLVINYDLPLK++ S QA KYRSSS SEPN+EVYLHRIGRAGRFGRKGAVFNLLCGD+EI +MDKIQ HFGSE+I+VRDSD+DIQAALK+AGL+
Subjt:  DQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEIIDVRDSDQDIQAALKTAGLV

A0A1S4E419 DEAD-box ATP-dependent RNA helicase 38-like6.9e-21280.64Show/hide
Query:  ATSDES-TTATVTVGSSSAP-----PVPKRAWGDEDDD-----------VGEHLESLTI----NLEEPVDSDI-SVTTGDTPYTSASSFEDLNLSQELLK
        +TSD S   A VT  SSSAP     PVPKRAWGDE+DD             E+LESL I    NLEEP+DS+I +VTTGDTPY+SAS+FEDLNLS+ELLK
Subjt:  ATSDES-TTATVTVGSSSAP-----PVPKRAWGDEDDD-----------VGEHLESLTI----NLEEPVDSDI-SVTTGDTPYTSASSFEDLNLSQELLK

Query:  GLYVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSANY
        GLYVEM+FHKPSKIQAI+LPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSANY
Subjt:  GLYVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSANY

Query:  VPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYNQLFV
        +PMSKRPPITAQVVIGTPGTIKKWMSSRKLGVS VKILVFDEADHMLGEDGFQDDSLRIMRDIERSS HCQVLLFSATFDENVKNFVSRVV KDYNQLFV
Subjt:  VPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYNQLFV

Query:  KKEELSLESVKQYKLICPDELTKIRLIKDRIFELADKL--------------------------------------------EFKDGLTKVLISTDLLAR
        KKEELSLESVKQYKLICPDELTKIR+IKDRIFELADKL                                            EFKDGLTKVLISTDLLAR
Subjt:  KKEELSLESVKQYKLICPDELTKIRLIKDRIFELADKL--------------------------------------------EFKDGLTKVLISTDLLAR

Query:  GFDQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEIIDVRDSDQDIQAALKTAGL
        GFDQQQVNLVINYDLPLKYE SPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIM MDKIQNHF SEII+VRDSD+DIQAALK AGL
Subjt:  GFDQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEIIDVRDSDQDIQAALKTAGL

Query:  V
        V
Subjt:  V

A0A6J1F4Z0 DEAD-box ATP-dependent RNA helicase 387.1e-20175.84Show/hide
Query:  PATSDESTT------ATVTVGSSSAP---PVPKRAWGD-EDDDVG----------EHLESLTI----NLEEPVDSDI-SVTTGDTPYTSASSFEDLNLSQ
        PA  D +T+      A V V +++ P   PVPKRAWGD EDDDVG          E++ESL I     LEEP DS+I +VTTGDTPY+SAS+FEDLNLS 
Subjt:  PATSDESTT------ATVTVGSSSAP---PVPKRAWGD-EDDDVG----------EHLESLTI----NLEEPVDSDI-SVTTGDTPYTSASSFEDLNLSQ

Query:  ELLKGLYVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPAD
        E+LKGLYVEM+F KPSKIQAI+LPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPAD
Subjt:  ELLKGLYVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPAD

Query:  SANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYN
        SANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVS VKILVFDEADHML EDGF+DDSLRIMRDIE+SSPHCQVLLFSATFDE VKNFVSRVV KDYN
Subjt:  SANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYN

Query:  QLFVKKEELSLESVKQYKLICPDELTKIRLIKDRIFELADKL--------------------------------------------EFKDGLTKVLISTD
        QLFVKKEELSLE VKQYK+ICPDEL KIR+IKDRIFEL +KL                                            EFKDGLTKVLISTD
Subjt:  QLFVKKEELSLESVKQYKLICPDELTKIRLIKDRIFELADKL--------------------------------------------EFKDGLTKVLISTD

Query:  LLARGFDQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEIIDVRDSDQDIQAALK
        LL+RGFDQQQVNLVINYDLPLKYESS +A K+RSSS SEPNYEVYLHRIGRAGRFGRKGAVFNLLCGD EIM+MDKIQNHF SE+ +VRDSD+DIQAAL+
Subjt:  LLARGFDQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEIIDVRDSDQDIQAALK

Query:  TAGLV
        TAGL+
Subjt:  TAGLV

A0A6J1IXW1 DEAD-box ATP-dependent RNA helicase 382.1e-20075.75Show/hide
Query:  PATSDESTTATVTVGSSSA-------PPVPKRAWGD-EDDDVG----------EHLESLTI----NLEEPVDSDI-SVTTGDTPYTSASSFEDLNLSQEL
        PA  D +T+   +  S+ A        PVPKRAWGD EDDDVG          E++ESL I     LEEP DS+I +VTTGDTPY+SAS+FEDLNLS E+
Subjt:  PATSDESTTATVTVGSSSA-------PPVPKRAWGD-EDDDVG----------EHLESLTI----NLEEPVDSDI-SVTTGDTPYTSASSFEDLNLSQEL

Query:  LKGLYVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSA
        LKGLYVEM+F KPSKIQAI+LPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSA
Subjt:  LKGLYVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSA

Query:  NYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYNQL
        NYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVS VKILVFDEADHML EDGF+DDSLRIMRDIE+SSPHCQVLLFSATFDE VKNFVSRVV KDYNQL
Subjt:  NYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYNQL

Query:  FVKKEELSLESVKQYKLICPDELTKIRLIKDRIFELADKL--------------------------------------------EFKDGLTKVLISTDLL
        FVKKEELSLE VKQYK+ICPDEL KIR+IKDRIFEL +KL                                            EFKDGLTKVLISTDLL
Subjt:  FVKKEELSLESVKQYKLICPDELTKIRLIKDRIFELADKL--------------------------------------------EFKDGLTKVLISTDLL

Query:  ARGFDQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEIIDVRDSDQDIQAALKTA
        +RGFDQQQVNLVINYDLPLKYESS +A K+RSSS SEPNYEVYLHRIGRAGRFGRKGAVFNLLCGD E+M+MDKIQNHF SE+ +VRDSD+DIQAALKTA
Subjt:  ARGFDQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEIIDVRDSDQDIQAALKTA

Query:  GLV
        GL+
Subjt:  GLV

SwissProt top hitse value%identityAlignment
Q10RI7 DEAD-box ATP-dependent RNA helicase 388.0e-13357.46Show/hide
Query:  GDEDDDVGEHLESLTINLEEPVDSDI-SVTTGDTPYTSASSFEDLNLSQELLKGLYVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLG
        G   DD G  L      L++  +S I +VT+G T Y SA++FEDL L+ ELLKGL+ EM F +PSKIQA+TLPMILTPPYKDLIAQAHNGSGKTTCFVLG
Subjt:  GDEDDDVGEHLESLTINLEEPVDSDI-SVTTGDTPYTSASSFEDLNLSQELLKGLYVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLG

Query:  MLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHML
        MLSRVD N K  QA CICPTRELA QN  VL +MGK+TGIT  CA+P    +YVP++K P IT QVVIGT GT+ KW++ +K+  + +KILVFDEADHML
Subjt:  MLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHML

Query:  GEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYNQLFVKKEELSLESVKQYKLICPDELTKIRLIKDRIFELADKL---------
         EDGF+ DS RIMRDI+RS+  CQVLLFSATF+E VK+FV+RV+ KD NQ+FVKKEEL+LE VKQYK+  PDE  KI +IKD+IFE   K+         
Subjt:  GEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYNQLFVKKEELSLESVKQYKLICPDELTKIRLIKDRIFELADKL---------

Query:  -----------------------------------EFKDGLTKVLISTDLLARGFDQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGR
                                           EFK+G TKVLISTD+LARGFDQ QVNLVINYD+P+K+            +  EP+YEVYLHRIGR
Subjt:  -----------------------------------EFKDGLTKVLISTDLLARGFDQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGR

Query:  AGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEIIDVRD--SDQDIQAALKTAGLV
        AGRFGRKGAVFNLLCG+ +   M KI+ +F   + +VR+  S++D + ALK AGLV
Subjt:  AGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEIIDVRD--SDQDIQAALKTAGLV

Q2TBP1 ATP-dependent RNA helicase DDX252.6e-6737.89Show/hide
Query:  DEDDDVGEHLESLTINL--EEPVDSD--ISVTTGD--TPYTSASSFEDLNLSQELLKGLYVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTC
        DEDD V     SL   L  +  V+S   + V   D  +P  S  +FE+L L +ELLKG+Y  M F++PSKIQ + LPM+L  P ++LIAQ+ +G+GKT  
Subjt:  DEDDDVGEHLESLTINL--EEPVDSD--ISVTTGD--TPYTSASSFEDLNLSQELLKGLYVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTC

Query:  FVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKL-GVSSVKILVFDE
        FVL MLSRV+     PQ  C+ PT ELA+Q   V+++MGK+        + A   N +P  +   +T Q+VIGTPGT+  W   RKL  ++ +++ V DE
Subjt:  FVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKL-GVSSVKILVFDE

Query:  ADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYNQLFVKKEELSLESVKQYKLICPDELTK-------------------
        AD M+   GF+D S+RI R +      CQ+LLFSATF+++V  F  R++  D N + ++KEEL+L +++QY ++C +   K                   
Subjt:  ADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYNQLFVKKEELSLESVKQYKLICPDELTK-------------------

Query:  -----------IRLIKD--RIFELADKL----------EFKDGLTKVLISTDLLARGFDQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHR
                   + +++D  ++  L+ +L           F+DG  KVLI+T++ ARG D +QV +V+N+DLP+             +   EP+YE YLHR
Subjt:  -----------IRLIKD--RIFELADKL----------EFKDGLTKVLISTDLLARGFDQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHR

Query:  IGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEIIDVRDSDQD
        IGR GRFG+KG  FN++  D+  + M KIQ+HF S I  +   D D
Subjt:  IGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEIIDVRDSDQD

Q93ZG7 DEAD-box ATP-dependent RNA helicase 382.8e-13855.16Show/hide
Query:  ELPATSDESTTATVTVGSS---SAPPVPKRAWGDEDDDVGE-----HLESLTIN--------LEEPVDSDI-SVTTGDTPYTSASSFEDLNLSQELLKGL
        ++P   + S+++TV   +S   + P   K+ WGD +DD  E      L SL+I         LEEP DS+I +VT+GDTPYTSAS FEDLNLS EL+KGL
Subjt:  ELPATSDESTTATVTVGSS---SAPPVPKRAWGDEDDDVGE-----HLESLTIN--------LEEPVDSDI-SVTTGDTPYTSASSFEDLNLSQELLKGL

Query:  YVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSANYVP
        YVEM+F KPSKIQAI+LPMI+TPP+K LIAQAHNGSGKTTCFVLGMLSRVD  L+ PQA CICPTRELA QN+EVL+KMGK+TGIT+E AVP DS    P
Subjt:  YVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSANYVP

Query:  MSKR-PPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYNQLFVK
         + R  P++A VVIGTPGT+KKWM+ ++LG++ +KILVFDEADHML  DGF+DDSL+IM+DI R +P+ QVLLFSATF+E VK+FV+R V KD NQLFVK
Subjt:  MSKR-PPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYNQLFVK

Query:  KEELSLESVKQYKLICPDELTKIRLIKDRIFELAD-------------------------------------------KLEFKDGLTKVLISTDLLARGF
        +E+L+L+SVKQYK++CP E  KI +IKD+I EL D                                             EFK+ LT+VLI+TD++ARGF
Subjt:  KEELSLESVKQYKLICPDELTKIRLIKDRIFELAD-------------------------------------------KLEFKDGLTKVLISTDLLARGF

Query:  DQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCG---DEEIMQMDKIQNHFGSEIIDVR--DSDQDIQAALKT
        DQQ+VNLV+NY+LP KYE+             EP+YEVYLHR+GRAGRFGRKGAVFNLL     D+E+  M+KI+ +F + + +++  +S+++ ++ALK 
Subjt:  DQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCG---DEEIMQMDKIQNHFGSEIIDVR--DSDQDIQAALKT

Query:  AGLV
        AGL+
Subjt:  AGLV

Q9QY15 ATP-dependent RNA helicase DDX251.3e-6636.24Show/hide
Query:  DEDDDVGEHLESLTIN-------LEEPVDSDISVTTGDTPYTSASSFEDLNLSQELLKGLYVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTT
        D++DDV +   +  +N       +E     ++      +P  S  +FE+L L +ELLKG+Y  M F++PSKIQ + LPM+L  P ++LIAQ+ +G+GKT 
Subjt:  DEDDDVGEHLESLTIN-------LEEPVDSDISVTTGDTPYTSASSFEDLNLSQELLKGLYVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTT

Query:  CFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKL-GVSSVKILVFD
         FVL MLSRV+     PQ  C+ PT ELA+Q   V+++MGK+        + A   N +P  +   +T Q++IGTPGT+  W   RKL  ++ +++ V D
Subjt:  CFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKL-GVSSVKILVFD

Query:  EADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYNQLFVKKEELSLESVKQYKLICPDELTK------------------
        EAD M+   GF D S+RI R +      CQ+LLFSATF+++V  F  R++  D N + ++KEEL+L +++QY ++C +   K                  
Subjt:  EADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYNQLFVKKEELSLESVKQYKLICPDELTK------------------

Query:  ------------IRLIKD--RIFELADKL----------EFKDGLTKVLISTDLLARGFDQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLH
                    + +++D  ++  L+ +L           F+DG  KVLI+T++ ARG D +QV +V+N+DLP+             +   EP+YE YLH
Subjt:  ------------IRLIKD--RIFELADKL----------EFKDGLTKVLISTDLLARGFDQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLH

Query:  RIGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEIIDVRDSDQD
        RIGR GRFG+KG  FN++  D+  + M KIQ+HF S I  +   D D
Subjt:  RIGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEIIDVRDSDQD

Q9UHL0 ATP-dependent RNA helicase DDX255.8e-6738.63Show/hide
Query:  TPYTSASSFEDLNLSQELLKGLYVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKK
        +P  S  +FE+L L +ELLKG+Y  M F++PSKIQ + LPM+L  P ++LIAQ+ +G+GKT  FVL MLSRV+     PQ  C+ PT ELA+Q   V+++
Subjt:  TPYTSASSFEDLNLSQELLKGLYVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKK

Query:  MGKYTGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKL-GVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATF
        MGK+        + A   N +P  +   IT Q++IGTPGT+  W    KL  ++ +++ V DEAD M+   GF D S+RI R +      CQ+LLFSATF
Subjt:  MGKYTGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKL-GVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATF

Query:  DENVKNFVSRVVKKDYNQLFVKKEELSLESVKQYKLICPDELTK------------------------------IRLIKD--RIFELADKL---------
        +++V +F  R++  D N + ++KEEL+L +++QY ++C     K                              + +I+D  ++  L+ +L         
Subjt:  DENVKNFVSRVVKKDYNQLFVKKEELSLESVKQYKLICPDELTK------------------------------IRLIKD--RIFELADKL---------

Query:  -EFKDGLTKVLISTDLLARGFDQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEI
          F+DG  KVLI+T++ ARG D +QV +V+N+DLP+K                EP+YE YLHRIGR GRFG+KG  FN++  D E+  + KIQ+HF S I
Subjt:  -EFKDGLTKVLISTDLLARGFDQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEI

Query:  IDVRDSDQD
          +   D D
Subjt:  IDVRDSDQD

Arabidopsis top hitse value%identityAlignment
AT1G72730.1 DEA(D/H)-box RNA helicase family protein7.9e-4332.05Show/hide
Query:  DTPYTS----ASSFEDLNLSQELLKGLYVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNI
        +T YT+      SF+ + L  +LL+G+Y    F KPS IQ     +I      D+I QA +G+GKT  F  G+L ++D++L   QA  + PTRELA Q  
Subjt:  DTPYTS----ASSFEDLNLSQELLKGLYVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNI

Query:  EVLKKMGKYTGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSP-HCQVLL
        +V++ +G Y G+ ++  V   S        +  +   VV+GTPG +   +  + L   ++K+ V DEAD ML   GF+D     + DI +  P   QV +
Subjt:  EVLKKMGKYTGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSP-HCQVLL

Query:  FSATFDENVKNFVSRVVKKDYNQLFVKKEELSLESVKQYKLICPDELTKIRLIKD------------------RIFELADKL------------------
        FSAT          + + K   ++ VK++EL+LE +KQ+ +    E  K+  + D                  ++  L DK+                  
Subjt:  FSATFDENVKNFVSRVVKKDYNQLFVKKEELSLESVKQYKLICPDELTKIRLIKD------------------RIFELADKL------------------

Query:  ------EFKDGLTKVLISTDLLARGFDQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNH
              EF+ G ++VLI+TDLLARG D QQV+LVIN+DLP + E+                   YLHRIGR+GRFGRKG   N +  ++E M  D IQ  
Subjt:  ------EFKDGLTKVLISTDLLARGFDQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNH

Query:  FGSEIIDVRDSDQDI
        +   + ++  +  D+
Subjt:  FGSEIIDVRDSDQDI

AT3G13920.1 eukaryotic translation initiation factor 4A16.0e-4332.43Show/hide
Query:  SFEDLNLSQELLKGLYVEMRFHKPSKIQAITLPMILTPPYK--DLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYT
        SF+ + L + LL+G+Y    F KPS IQ       + P  K  D+I QA +G+GKT  F  G+L ++D +L   QA  + PTRELA Q  +V++ +G Y 
Subjt:  SFEDLNLSQELLKGLYVEMRFHKPSKIQAITLPMILTPPYK--DLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYT

Query:  GITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKN
        G+     V   S        +  +   VV+GTPG +   +  + L   ++K+ V DEAD ML   GF+D    I + +    P  QV +FSAT       
Subjt:  GITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKN

Query:  FVSRVVKKDYNQLFVKKEELSLESVKQYKLICPDELTKIRLIKD------------------RIFELADKL------------------------EFKDG
           + + K   ++ VK++EL+LE +KQ+ +    E  K+  + D                  ++  L DK+                        EF+ G
Subjt:  FVSRVVKKDYNQLFVKKEELSLESVKQYKLICPDELTKIRLIKD------------------RIFELADKL------------------------EFKDG

Query:  LTKVLISTDLLARGFDQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEIIDVRDS
         ++VLI+TDLLARG D QQV+LVIN+DLP + E+                   YLHRIGR+GRFGRKG   N +  D+E M  D IQ  +   + ++  +
Subjt:  LTKVLISTDLLARGFDQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEIIDVRDS

Query:  DQDI
          D+
Subjt:  DQDI

AT3G13920.3 eukaryotic translation initiation factor 4A16.0e-4332.43Show/hide
Query:  SFEDLNLSQELLKGLYVEMRFHKPSKIQAITLPMILTPPYK--DLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYT
        SF+ + L + LL+G+Y    F KPS IQ       + P  K  D+I QA +G+GKT  F  G+L ++D +L   QA  + PTRELA Q  +V++ +G Y 
Subjt:  SFEDLNLSQELLKGLYVEMRFHKPSKIQAITLPMILTPPYK--DLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYT

Query:  GITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKN
        G+     V   S        +  +   VV+GTPG +   +  + L   ++K+ V DEAD ML   GF+D    I + +    P  QV +FSAT       
Subjt:  GITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKN

Query:  FVSRVVKKDYNQLFVKKEELSLESVKQYKLICPDELTKIRLIKD------------------RIFELADKL------------------------EFKDG
           + + K   ++ VK++EL+LE +KQ+ +    E  K+  + D                  ++  L DK+                        EF+ G
Subjt:  FVSRVVKKDYNQLFVKKEELSLESVKQYKLICPDELTKIRLIKD------------------RIFELADKL------------------------EFKDG

Query:  LTKVLISTDLLARGFDQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEIIDVRDS
         ++VLI+TDLLARG D QQV+LVIN+DLP + E+                   YLHRIGR+GRFGRKG   N +  D+E M  D IQ  +   + ++  +
Subjt:  LTKVLISTDLLARGFDQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEIIDVRDS

Query:  DQDI
          D+
Subjt:  DQDI

AT3G19760.1 eukaryotic initiation factor 4A-III1.0e-4231.76Show/hide
Query:  TTGDTPYTSASSFEDLNLSQELLKGLYVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIE
        T G  P T   SF D+ + +++L+G+Y E  F KPS IQ   +  IL    +D+IAQA +G+GKT+   L +   VD + +  QA  + PTRELA Q  +
Subjt:  TTGDTPYTSASSFEDLNLSQELLKGLYVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIE

Query:  VLKKMGKYTGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFS
         ++ +G +  I +   +  +S       ++      VV GTPG +   +  R L   ++K+L+ DE+D ML   GF+D    + R +    P  QV L S
Subjt:  VLKKMGKYTGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFS

Query:  ATFDENVKNFVSRVVKKDYNQLFVKKEELSLESVKQ-----------YKLICP--DELTKIRLI-----KDRIFELADKL--------------------
        AT    +    S+ + +   ++ VK++EL+LE +KQ           +  +C   D LT  + +     K ++  L++K+                    
Subjt:  ATFDENVKNFVSRVVKKDYNQLFVKKEELSLESVKQ-----------YKLICP--DELTKIRLI-----KDRIFELADKL--------------------

Query:  ----EFKDGLTKVLISTDLLARGFDQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFG
            EF+ G ++VLI+TD+ ARG D QQV+LVINYDLP                    N E+Y+HRIGR+GRFGRKG   N +  D +I  +  I+ ++ 
Subjt:  ----EFKDGLTKVLISTDLLARGFDQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFG

Query:  SEI
        ++I
Subjt:  SEI

AT3G53110.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein2.0e-13955.16Show/hide
Query:  ELPATSDESTTATVTVGSS---SAPPVPKRAWGDEDDDVGE-----HLESLTIN--------LEEPVDSDI-SVTTGDTPYTSASSFEDLNLSQELLKGL
        ++P   + S+++TV   +S   + P   K+ WGD +DD  E      L SL+I         LEEP DS+I +VT+GDTPYTSAS FEDLNLS EL+KGL
Subjt:  ELPATSDESTTATVTVGSS---SAPPVPKRAWGDEDDDVGE-----HLESLTIN--------LEEPVDSDI-SVTTGDTPYTSASSFEDLNLSQELLKGL

Query:  YVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSANYVP
        YVEM+F KPSKIQAI+LPMI+TPP+K LIAQAHNGSGKTTCFVLGMLSRVD  L+ PQA CICPTRELA QN+EVL+KMGK+TGIT+E AVP DS    P
Subjt:  YVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSANYVP

Query:  MSKR-PPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYNQLFVK
         + R  P++A VVIGTPGT+KKWM+ ++LG++ +KILVFDEADHML  DGF+DDSL+IM+DI R +P+ QVLLFSATF+E VK+FV+R V KD NQLFVK
Subjt:  MSKR-PPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYNQLFVK

Query:  KEELSLESVKQYKLICPDELTKIRLIKDRIFELAD-------------------------------------------KLEFKDGLTKVLISTDLLARGF
        +E+L+L+SVKQYK++CP E  KI +IKD+I EL D                                             EFK+ LT+VLI+TD++ARGF
Subjt:  KEELSLESVKQYKLICPDELTKIRLIKDRIFELAD-------------------------------------------KLEFKDGLTKVLISTDLLARGF

Query:  DQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCG---DEEIMQMDKIQNHFGSEIIDVR--DSDQDIQAALKT
        DQQ+VNLV+NY+LP KYE+             EP+YEVYLHR+GRAGRFGRKGAVFNLL     D+E+  M+KI+ +F + + +++  +S+++ ++ALK 
Subjt:  DQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCG---DEEIMQMDKIQNHFGSEIIDVR--DSDQDIQAALKT

Query:  AGLV
        AGL+
Subjt:  AGLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAAGAGGAAGAGGGTTGCAGTTATGGTCTGGAATTCTGGTCAGTTTCATGGTGTAATTGAAGCTGAAACAGAAGGTCTGGTTGCTGTCGCAGGAAGCAGCGACAC
TGAAGGTATAAGGGTGAGCAGCGAGACAAGTGTCGCTGGTGTCGCTGGAGGCTTTTTGTCTCACGACTCTCGCTGGATATCGCTGGGTATCGCTAGTCTCACTGATCAAG
TAGCGAGTGAGTCTAGGGTACTTAGCCTACACAGCAACTCGTCTAGGCCCACCATTAGTGACTGGAATTTTAAGAATTGTCTTGGTCAATGTATAAGACTGGTAGTAGAT
GTTGTAAGAGGGTCGGTGTCTGCTACCCTCACACTTTCTCCTAGGTTAAGAGGGGTTAGCAACAGGGGCGAGACAGGCGGGTGGAAGTCCGTCCCTGCCCTGTGGGGGAA
ATTTACCCTCATTTCTGCTCCCATCCCTACCATTTGTAGGCGAAGACGAGGGCAGGGATTCCCTGTCAGGCCGCAGCTCCACCACGCAGGACATCAGCCCAAAAACTTTT
CAACCATGGAATTACCGGCTACTAGCGACGAGTCGACCACCGCCACTGTCACCGTCGGCTCGAGTTCTGCCCCACCTGTGCCCAAACGAGCTTGGGGCGATGAAGATGAT
GATGTGGGTGAACACTTGGAATCCCTTACAATAAATCTTGAAGAACCCGTGGACTCCGACATCTCGGTGACAACCGGTGATACTCCATATACATCAGCCAGTTCTTTTGA
GGATCTGAATCTGTCTCAAGAGTTGTTGAAGGGTTTGTATGTTGAGATGAGATTCCATAAGCCAAGTAAAATTCAAGCTATAACTTTACCCATGATCTTGACTCCTCCTT
ACAAGGATTTAATTGCTCAAGCTCATAATGGTTCTGGAAAGACTACCTGTTTTGTGCTTGGGATGTTGAGTCGTGTTGATGTGAACTTGAAGGCTCCTCAGGCGTTTTGC
ATATGTCCTACAAGGGAGTTAGCCATGCAGAATATTGAGGTTCTTAAGAAAATGGGAAAATACACTGGGATAACTTCAGAGTGTGCTGTTCCCGCTGACAGTGCTAATTA
TGTACCCATGTCAAAGCGACCACCAATTACTGCGCAAGTTGTGATTGGAACTCCTGGCACAATAAAGAAATGGATGTCATCGAGGAAGTTGGGAGTAAGTTCGGTGAAGA
TTCTTGTTTTTGATGAGGCTGATCATATGCTTGGCGAGGATGGCTTTCAGGATGATTCGTTGAGAATCATGAGGGACATTGAGAGAAGTAGCCCTCATTGCCAGGTGCTT
TTGTTCTCTGCTACATTTGATGAGAATGTTAAAAACTTCGTCTCTAGGGTTGTTAAAAAAGACTACAACCAACTTTTTGTGAAGAAGGAAGAACTATCTTTGGAGAGTGT
GAAGCAATACAAGTTGATATGTCCAGATGAATTAACTAAAATTCGACTCATAAAAGATAGAATTTTTGAACTTGCAGACAAATTGGAGTTCAAGGATGGTTTGACCAAAG
TTCTTATTTCGACTGACCTTCTAGCTCGAGGCTTTGATCAGCAACAGGTCAATCTAGTTATCAATTATGATCTTCCTCTTAAATATGAATCTTCTCCACAAGCGACGAAA
TATAGATCTTCCTCATTGTCTGAGCCTAACTACGAGGTGTACCTTCATAGAATTGGTCGGGCAGGTCGTTTTGGGCGCAAGGGAGCTGTGTTTAACTTGCTGTGTGGTGA
TGAGGAAATCATGCAAATGGACAAAATTCAGAACCATTTTGGCTCCGAAATAATAGACGTTCGAGACTCCGATCAGGACATTCAAGCAGCCTTAAAAACTGCCGGATTGG
TTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAAAGAGGAAGAGGGTTGCAGTTATGGTCTGGAATTCTGGTCAGTTTCATGGTGTAATTGAAGCTGAAACAGAAGGTCTGGTTGCTGTCGCAGGAAGCAGCGACAC
TGAAGGTATAAGGGTGAGCAGCGAGACAAGTGTCGCTGGTGTCGCTGGAGGCTTTTTGTCTCACGACTCTCGCTGGATATCGCTGGGTATCGCTAGTCTCACTGATCAAG
TAGCGAGTGAGTCTAGGGTACTTAGCCTACACAGCAACTCGTCTAGGCCCACCATTAGTGACTGGAATTTTAAGAATTGTCTTGGTCAATGTATAAGACTGGTAGTAGAT
GTTGTAAGAGGGTCGGTGTCTGCTACCCTCACACTTTCTCCTAGGTTAAGAGGGGTTAGCAACAGGGGCGAGACAGGCGGGTGGAAGTCCGTCCCTGCCCTGTGGGGGAA
ATTTACCCTCATTTCTGCTCCCATCCCTACCATTTGTAGGCGAAGACGAGGGCAGGGATTCCCTGTCAGGCCGCAGCTCCACCACGCAGGACATCAGCCCAAAAACTTTT
CAACCATGGAATTACCGGCTACTAGCGACGAGTCGACCACCGCCACTGTCACCGTCGGCTCGAGTTCTGCCCCACCTGTGCCCAAACGAGCTTGGGGCGATGAAGATGAT
GATGTGGGTGAACACTTGGAATCCCTTACAATAAATCTTGAAGAACCCGTGGACTCCGACATCTCGGTGACAACCGGTGATACTCCATATACATCAGCCAGTTCTTTTGA
GGATCTGAATCTGTCTCAAGAGTTGTTGAAGGGTTTGTATGTTGAGATGAGATTCCATAAGCCAAGTAAAATTCAAGCTATAACTTTACCCATGATCTTGACTCCTCCTT
ACAAGGATTTAATTGCTCAAGCTCATAATGGTTCTGGAAAGACTACCTGTTTTGTGCTTGGGATGTTGAGTCGTGTTGATGTGAACTTGAAGGCTCCTCAGGCGTTTTGC
ATATGTCCTACAAGGGAGTTAGCCATGCAGAATATTGAGGTTCTTAAGAAAATGGGAAAATACACTGGGATAACTTCAGAGTGTGCTGTTCCCGCTGACAGTGCTAATTA
TGTACCCATGTCAAAGCGACCACCAATTACTGCGCAAGTTGTGATTGGAACTCCTGGCACAATAAAGAAATGGATGTCATCGAGGAAGTTGGGAGTAAGTTCGGTGAAGA
TTCTTGTTTTTGATGAGGCTGATCATATGCTTGGCGAGGATGGCTTTCAGGATGATTCGTTGAGAATCATGAGGGACATTGAGAGAAGTAGCCCTCATTGCCAGGTGCTT
TTGTTCTCTGCTACATTTGATGAGAATGTTAAAAACTTCGTCTCTAGGGTTGTTAAAAAAGACTACAACCAACTTTTTGTGAAGAAGGAAGAACTATCTTTGGAGAGTGT
GAAGCAATACAAGTTGATATGTCCAGATGAATTAACTAAAATTCGACTCATAAAAGATAGAATTTTTGAACTTGCAGACAAATTGGAGTTCAAGGATGGTTTGACCAAAG
TTCTTATTTCGACTGACCTTCTAGCTCGAGGCTTTGATCAGCAACAGGTCAATCTAGTTATCAATTATGATCTTCCTCTTAAATATGAATCTTCTCCACAAGCGACGAAA
TATAGATCTTCCTCATTGTCTGAGCCTAACTACGAGGTGTACCTTCATAGAATTGGTCGGGCAGGTCGTTTTGGGCGCAAGGGAGCTGTGTTTAACTTGCTGTGTGGTGA
TGAGGAAATCATGCAAATGGACAAAATTCAGAACCATTTTGGCTCCGAAATAATAGACGTTCGAGACTCCGATCAGGACATTCAAGCAGCCTTAAAAACTGCCGGATTGG
TTTGA
Protein sequenceShow/hide protein sequence
MTKRKRVAVMVWNSGQFHGVIEAETEGLVAVAGSSDTEGIRVSSETSVAGVAGGFLSHDSRWISLGIASLTDQVASESRVLSLHSNSSRPTISDWNFKNCLGQCIRLVVD
VVRGSVSATLTLSPRLRGVSNRGETGGWKSVPALWGKFTLISAPIPTICRRRRGQGFPVRPQLHHAGHQPKNFSTMELPATSDESTTATVTVGSSSAPPVPKRAWGDEDD
DVGEHLESLTINLEEPVDSDISVTTGDTPYTSASSFEDLNLSQELLKGLYVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFC
ICPTRELAMQNIEVLKKMGKYTGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVL
LFSATFDENVKNFVSRVVKKDYNQLFVKKEELSLESVKQYKLICPDELTKIRLIKDRIFELADKLEFKDGLTKVLISTDLLARGFDQQQVNLVINYDLPLKYESSPQATK
YRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEIIDVRDSDQDIQAALKTAGLV