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Clc01G08760 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G08760
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionStress-response A/B barrel domain-containing protein
Genome locationClcChr01:9175872..9177635
RNA-Seq ExpressionClc01G08760
SyntenyClc01G08760
Gene Ontology termsGO:0009865 - pollen tube adhesion (biological process)
InterPro domainsIPR011008 - Dimeric alpha-beta barrel
IPR013097 - Stress responsive alpha-beta barrel
IPR044662 - Stress-response A/B barrel domain-containing protein HS1/DABB1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG8481762.1 hypothetical protein CXB51_026443 [Gossypium anomalum]1.4e-3369.09Show/hide
Query:  EESKGVVMHILLVKFKEEIIQEQINDIINKYANLVNLIDSMKSFQW--DVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQIVAVD
        EE KGVV HILL KFK+EI  E+I ++I  YANLVNLI  MK+F W  DVSIE+LHQG+TH+FESTFES EGIAEYIAHPAH+EFANLFLP+L++++  D
Subjt:  EESKGVVMHILLVKFKEEIIQEQINDIINKYANLVNLIDSMKSFQW--DVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQIVAVD

Query:  YIPT-ELPKK
        Y PT  +PKK
Subjt:  YIPT-ELPKK

MBA0753970.1 hypothetical protein [Gossypium gossypioides]1.4e-3371.15Show/hide
Query:  EESKGVVMHILLVKFKEEIIQEQINDIINKYANLVNLIDSMKSFQW--DVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQIVAVD
        EE+KGVV HILL KFK+EI  E+I ++I  YANLVNLI  MK+F W  DVSIE+LHQGYTH+FESTFES EGIAEYIAHPAH+EFANLFLP+L++++  D
Subjt:  EESKGVVMHILLVKFKEEIIQEQINDIINKYANLVNLIDSMKSFQW--DVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQIVAVD

Query:  YIPT
        Y PT
Subjt:  YIPT

MBA0812412.1 hypothetical protein [Gossypium harknessii]1.8e-3370.19Show/hide
Query:  EESKGVVMHILLVKFKEEIIQEQINDIINKYANLVNLIDSMKSFQW--DVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQIVAVD
        EE+KGVV HILL KFK+EI  E+I ++I  YANLVNLI  MK+F W  DVSIE+LHQG+TH+FESTFES+EGIAEYIAHPAH+EFANLFLP+L++++  D
Subjt:  EESKGVVMHILLVKFKEEIIQEQINDIINKYANLVNLIDSMKSFQW--DVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQIVAVD

Query:  YIPT
        Y PT
Subjt:  YIPT

XP_006419297.1 stress-response A/B barrel domain-containing protein HS1 [Citrus clementina]3.7e-3467.59Show/hide
Query:  GKEGEESKGVVMHILLVKFKEEIIQEQINDIINKYANLVNLIDSMKSFQW--DVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQI
        G++ EE+KGVV H+LL KFKE   Q+QI+ +I  YANLVNLI+ MKSFQW  DVSIE+LHQG+THIFESTFES EG+AEY+AHPAH+E+ANLFL  LE++
Subjt:  GKEGEESKGVVMHILLVKFKEEIIQEQINDIINKYANLVNLIDSMKSFQW--DVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQI

Query:  VAVDYIPT
        + +DY PT
Subjt:  VAVDYIPT

XP_022760742.1 stress-response A/B barrel domain-containing protein HS1 [Durio zibethinus]2.4e-3370.19Show/hide
Query:  EESKGVVMHILLVKFKEEIIQEQINDIINKYANLVNLIDSMKSFQW--DVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQIVAVD
        EE KGVV HILL KFK+E   ++I ++I  YANLVNLI+ MK+FQW  DVSIE+LHQG+TH+FESTFES EGIAEYIAHPAH+EFANLFLP+LE+++  D
Subjt:  EESKGVVMHILLVKFKEEIIQEQINDIINKYANLVNLIDSMKSFQW--DVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQIVAVD

Query:  YIPT
        Y PT
Subjt:  YIPT

TrEMBL top hitse value%identityAlignment
A0A1U8K7K5 Heat stable protein 12.0e-3370.19Show/hide
Query:  EESKGVVMHILLVKFKEEIIQEQINDIINKYANLVNLIDSMKSFQW--DVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQIVAVD
        EE+KGVV HILL KFK+EI  E+I ++I  YANLVNLI  MK+F W  DVSIE+LHQG+TH+FESTFES EGIAEYIAHPAH+EFANLFLP+L++++  D
Subjt:  EESKGVVMHILLVKFKEEIIQEQINDIINKYANLVNLIDSMKSFQW--DVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQIVAVD

Query:  YIPT
        Y PT
Subjt:  YIPT

A0A6P6A7D9 stress-response A/B barrel domain-containing protein HS11.2e-3370.19Show/hide
Query:  EESKGVVMHILLVKFKEEIIQEQINDIINKYANLVNLIDSMKSFQW--DVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQIVAVD
        EE KGVV HILL KFK+E   ++I ++I  YANLVNLI+ MK+FQW  DVSIE+LHQG+TH+FESTFES EGIAEYIAHPAH+EFANLFLP+LE+++  D
Subjt:  EESKGVVMHILLVKFKEEIIQEQINDIINKYANLVNLIDSMKSFQW--DVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQIVAVD

Query:  YIPT
        Y PT
Subjt:  YIPT

A0A7J9CZR3 Stress-response A/B barrel domain-containing protein6.8e-3471.15Show/hide
Query:  EESKGVVMHILLVKFKEEIIQEQINDIINKYANLVNLIDSMKSFQW--DVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQIVAVD
        EE+KGVV HILL KFK+EI  E+I ++I  YANLVNLI  MK+F W  DVSIE+LHQGYTH+FESTFES EGIAEYIAHPAH+EFANLFLP+L++++  D
Subjt:  EESKGVVMHILLVKFKEEIIQEQINDIINKYANLVNLIDSMKSFQW--DVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQIVAVD

Query:  YIPT
        Y PT
Subjt:  YIPT

A0A7J9HRD6 Stress-response A/B barrel domain-containing protein8.9e-3470.19Show/hide
Query:  EESKGVVMHILLVKFKEEIIQEQINDIINKYANLVNLIDSMKSFQW--DVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQIVAVD
        EE+KGVV HILL KFK+EI  E+I ++I  YANLVNLI  MK+F W  DVSIE+LHQG+TH+FESTFES+EGIAEYIAHPAH+EFANLFLP+L++++  D
Subjt:  EESKGVVMHILLVKFKEEIIQEQINDIINKYANLVNLIDSMKSFQW--DVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQIVAVD

Query:  YIPT
        Y PT
Subjt:  YIPT

V4RXS1 Stress-response A/B barrel domain-containing protein1.8e-3467.59Show/hide
Query:  GKEGEESKGVVMHILLVKFKEEIIQEQINDIINKYANLVNLIDSMKSFQW--DVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQI
        G++ EE+KGVV H+LL KFKE   Q+QI+ +I  YANLVNLI+ MKSFQW  DVSIE+LHQG+THIFESTFES EG+AEY+AHPAH+E+ANLFL  LE++
Subjt:  GKEGEESKGVVMHILLVKFKEEIIQEQINDIINKYANLVNLIDSMKSFQW--DVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQI

Query:  VAVDYIPT
        + +DY PT
Subjt:  VAVDYIPT

SwissProt top hitse value%identityAlignment
I6WU39 Olivetolic acid cyclase5.6e-1743.3Show/hide
Query:  VMHILLVKFKEEIIQEQINDIINKYANLVNLIDSMKSFQW--DVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQIVAVDYIP
        V H++++KFK+EI + Q  +    Y NLVN+I +MK   W  DV+ ++  +GYTHI E TFES E I +YI HPAH+ F +++    E+++  DY P
Subjt:  VMHILLVKFKEEIIQEQINDIINKYANLVNLIDSMKSFQW--DVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQIVAVDYIP

Q9FK81 Stress-response A/B barrel domain-containing protein At5g225802.6e-1439.36Show/hide
Query:  HILLVKFKEEIIQEQINDIINKYANLVNLIDSMKSFQWDVSIED---LHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQIVAVDY
        H+++VKFKE+    ++++I+    NLV+ ID++KSF+W    E    L QG+TH F  TFE+K+G   + +HP H+EF+  F   +++IV +D+
Subjt:  HILLVKFKEEIIQEQINDIINKYANLVNLIDSMKSFQWDVSIED---LHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQIVAVDY

Q9LUV2 Stress-response A/B barrel domain-containing protein HS15.6e-3362.26Show/hide
Query:  EESKGVVMHILLVKFKEEIIQEQINDIINKYANLVNLIDSMKSFQW--DVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQIVAVD
        EE+KG V H+LL  FK+ +  E+I ++I  YANLVNLI+ MK+F W  DVSIE+LHQGYTHIFESTFESKE +AEYIAHPAH+EFA +FL +L++++ +D
Subjt:  EESKGVVMHILLVKFKEEIIQEQINDIINKYANLVNLIDSMKSFQW--DVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQIVAVD

Query:  YIPTEL
        Y PT +
Subjt:  YIPTEL

Q9SIP1 Stress-response A/B barrel domain-containing protein UP35.2e-0732.08Show/hide
Query:  VVMHILLVKFKEEIIQEQINDIINKYANLVNLIDSMKSFQWDVSIEDLHQ-----GYTHIFESTFESKEGIAEYIAHPAHIEFA-NLFLPTLEQIVAVDY
        ++ HI+L K K++    +I  +IN   N +  +D +      +S   LH+      +TH+  S +ESKE +A Y AHP H+       LP  + I+AVD+
Subjt:  VVMHILLVKFKEEIIQEQINDIINKYANLVNLIDSMKSFQWDVSIEDLHQ-----GYTHIFESTFESKEGIAEYIAHPAHIEFA-NLFLPTLEQIVAVDY

Query:  IPTELP
        I   +P
Subjt:  IPTELP

Q9SYD8 Stress-response A/B barrel domain-containing protein DABB19.9e-0628.04Show/hide
Query:  VVMHILLVKFKEEIIQE-QINDIINKYANLVNLIDSMKSFQWDVS--IEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQIVAVDYIPT
        +V H++L K  ++ +   +IN ++N    LVNL   +  +   +   I      +TH+  S + SKE +  Y  HP H+          E I+AVD+I  
Subjt:  VVMHILLVKFKEEIIQE-QINDIINKYANLVNLIDSMKSFQWDVS--IEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQIVAVDYIPT

Query:  ELPKKLS
        + P+ L+
Subjt:  ELPKKLS

Arabidopsis top hitse value%identityAlignment
AT1G51360.1 dimeric A/B barrel domainS-protein 17.0e-0728.04Show/hide
Query:  VVMHILLVKFKEEIIQE-QINDIINKYANLVNLIDSMKSFQWDVS--IEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQIVAVDYIPT
        +V H++L K  ++ +   +IN ++N    LVNL   +  +   +   I      +TH+  S + SKE +  Y  HP H+          E I+AVD+I  
Subjt:  VVMHILLVKFKEEIIQE-QINDIINKYANLVNLIDSMKSFQWDVS--IEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQIVAVDYIPT

Query:  ELPKKLS
        + P+ L+
Subjt:  ELPKKLS

AT2G31670.1 Stress responsive alpha-beta barrel domain protein3.7e-0832.08Show/hide
Query:  VVMHILLVKFKEEIIQEQINDIINKYANLVNLIDSMKSFQWDVSIEDLHQ-----GYTHIFESTFESKEGIAEYIAHPAHIEFA-NLFLPTLEQIVAVDY
        ++ HI+L K K++    +I  +IN   N +  +D +      +S   LH+      +TH+  S +ESKE +A Y AHP H+       LP  + I+AVD+
Subjt:  VVMHILLVKFKEEIIQEQINDIINKYANLVNLIDSMKSFQWDVSIEDLHQ-----GYTHIFESTFESKEGIAEYIAHPAHIEFA-NLFLPTLEQIVAVDY

Query:  IPTELP
        I   +P
Subjt:  IPTELP

AT3G17210.1 heat stable protein 14.0e-3462.26Show/hide
Query:  EESKGVVMHILLVKFKEEIIQEQINDIINKYANLVNLIDSMKSFQW--DVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQIVAVD
        EE+KG V H+LL  FK+ +  E+I ++I  YANLVNLI+ MK+F W  DVSIE+LHQGYTHIFESTFESKE +AEYIAHPAH+EFA +FL +L++++ +D
Subjt:  EESKGVVMHILLVKFKEEIIQEQINDIINKYANLVNLIDSMKSFQW--DVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQIVAVD

Query:  YIPTEL
        Y PT +
Subjt:  YIPTEL

AT5G22580.1 Stress responsive A/B Barrel Domain1.8e-1539.36Show/hide
Query:  HILLVKFKEEIIQEQINDIINKYANLVNLIDSMKSFQWDVSIED---LHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQIVAVDY
        H+++VKFKE+    ++++I+    NLV+ ID++KSF+W    E    L QG+TH F  TFE+K+G   + +HP H+EF+  F   +++IV +D+
Subjt:  HILLVKFKEEIIQEQINDIINKYANLVNLIDSMKSFQWDVSIED---LHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQIVAVDY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAAGAAGGGGAAGAATCAAAAGGAGTGGTGATGCATATTTTGCTAGTGAAATTCAAAGAGGAAATCATACAGGAACAAATCAACGATATCATTAATAAA
TATGCTAATCTCGTCAATCTCATTGATTCTATGAAGTCTTTTCAATGGGATGTTAGCATTGAAGATCTTCACCAAGGTTACACTCATATCTTTGAATCCACCTTT
GAGAGTAAGGAAGGCATAGCAGAGTATATAGCTCATCCAGCACATATCGAATTTGCAAACTTGTTCCTTCCTACTTTGGAACAAATTGTTGCTGTGGACTACATA
CCCACTGAATTGCCGAAAAAGTTATCAACTAACAACGACGACGACAATGACAACGACGAGGACAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAAGAAGGGGAAGAATCAAAAGGAGTGGTGATGCATATTTTGCTAGTGAAATTCAAAGAGGAAATCATACAGGAACAAATCAACGATATCATTAATAAA
TATGCTAATCTCGTCAATCTCATTGATTCTATGAAGTCTTTTCAATGGGATGTTAGCATTGAAGATCTTCACCAAGGTTACACTCATATCTTTGAATCCACCTTT
GAGAGTAAGGAAGGCATAGCAGAGTATATAGCTCATCCAGCACATATCGAATTTGCAAACTTGTTCCTTCCTACTTTGGAACAAATTGTTGCTGTGGACTACATA
CCCACTGAATTGCCGAAAAAGTTATCAACTAACAACGACGACGACAATGACAACGACGAGGACAATTAA
Protein sequenceShow/hide protein sequence
MGKEGEESKGVVMHILLVKFKEEIIQEQINDIINKYANLVNLIDSMKSFQWDVSIEDLHQGYTHIFESTFESKEGIAEYIAHPAHIEFANLFLPTLEQIVAVDYI
PTELPKKLSTNNDDDNDNDEDN