; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc01G08890 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G08890
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionrRNA-processing protein UTP23 homolog
Genome locationClcChr01:9532735..9546278
RNA-Seq ExpressionClc01G08890
SyntenyClc01G08890
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0032040 - small-subunit processome (cellular component)
InterPro domainsIPR006984 - rRNA-processing protein Fcf1/Utp23
IPR029060 - PIN-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143766.1 rRNA-processing protein UTP23 homolog isoform X1 [Cucumis sativus]2.0e-10679.21Show/hide
Query:  MRIKKQKRQRRA------------------------------IIPADDAVAKAVGDRVKLFTTRCVLLELRALGQSYSGAFEAASQLFTARCNHEKRKSA
        MRIKKQKRQRRA                              I+PAD+AVAK VGDRVKLFTTRCVLLEL+ALGQSYSGAFEAASQLFTARC+HEKRKSA
Subjt:  MRIKKQKRQRRA------------------------------IIPADDAVAKAVGDRVKLFTTRCVLLELRALGQSYSGAFEAASQLFTARCNHEKRKSA

Query:  EACIIDVIGESNPEHFFVATQDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDAQRQFVKSLEEKRMHISETERNLLKKKIKYEVEAEKTNGDEDSGDQNL
        EACI+DVIGESNPEHFFVATQDTNLRKQLQQIPGVPLIFGLRNALFMEQPSD QRQFVKSLEEKRMH+SE ER+LLKKK KY VEAEKTN DED  DQNL
Subjt:  EACIIDVIGESNPEHFFVATQDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDAQRQFVKSLEEKRMHISETERNLLKKKIKYEVEAEKTNGDEDSGDQNL

Query:  DTQVVKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVKPSSHPVSEKKKDD--AASKRTRKRKRSRKAKTPTETTV
        DT V+KKKKK+IP+NLKDR QFKRNKAKGPNPLSCLKKKVKPS HPVSEKKKDD   A KRTRKRKRSRKAK PTET +
Subjt:  DTQVVKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVKPSSHPVSEKKKDD--AASKRTRKRKRSRKAKTPTETTV

XP_008465424.1 PREDICTED: rRNA-processing protein UTP23 homolog [Cucumis melo]1.6e-10378.7Show/hide
Query:  MRIKKQKRQRRA------------------------------IIPADDAVAKAVGDRVKLFTTRCVLLELRALGQSYSGAFEAASQLFTARCNHEKRKSA
        MRIKKQKRQRRA                              I+PAD+AVAK VGDRVKLFTTRCVLLEL+ALGQSY+GAFEAASQLFTARC+HEKRKSA
Subjt:  MRIKKQKRQRRA------------------------------IIPADDAVAKAVGDRVKLFTTRCVLLELRALGQSYSGAFEAASQLFTARCNHEKRKSA

Query:  EACIIDVIGESNPEHFFVATQDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDAQRQFVKSLEEKRMHISETERNLLKKKIKYEVEAEKTNGDEDSGDQNL
        EACI+DVIGESNPEHFFVATQDTNLRKQLQQIPGVPLIFGLRN LFMEQPSD QRQFVKSLEEKRMH+SE ER+LLKKK+KY VEAEKTN DED GDQNL
Subjt:  EACIIDVIGESNPEHFFVATQDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDAQRQFVKSLEEKRMHISETERNLLKKKIKYEVEAEKTNGDEDSGDQNL

Query:  DTQVVKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVKPSSHPVSEKKK--DDAASKRTRKRKRSRKAKTPTET
        D QV+ KKKK+I +NLKDR QFKRNKAKGPNPLSCLKKKVKPS HPVSEKKK  DD A KRTRKRKRSRKAK PTET
Subjt:  DTQVVKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVKPSSHPVSEKKK--DDAASKRTRKRKRSRKAKTPTET

XP_011655276.1 rRNA-processing protein UTP23 homolog isoform X2 [Cucumis sativus]5.9e-10679.14Show/hide
Query:  MRIKKQKRQRRA------------------------------IIPADDAVAKAVGDRVKLFTTRCVLLELRALGQSYSGAFEAASQLFTARCNHEKRKSA
        MRIKKQKRQRRA                              I+PAD+AVAK VGDRVKLFTTRCVLLEL+ALGQSYSGAFEAASQLFTARC+HEKRKSA
Subjt:  MRIKKQKRQRRA------------------------------IIPADDAVAKAVGDRVKLFTTRCVLLELRALGQSYSGAFEAASQLFTARCNHEKRKSA

Query:  EACIIDVIGESNPEHFFVATQDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDAQRQFVKSLEEKRMHISETERNLLKKKIKYEVEAEKTNGDEDSGDQNL
        EACI+DVIGESNPEHFFVATQDTNLRKQLQQIPGVPLIFGLRNALFMEQPSD QRQFVKSLEEKRMH+SE ER+LLKKK KY VEAEKTN DED  DQNL
Subjt:  EACIIDVIGESNPEHFFVATQDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDAQRQFVKSLEEKRMHISETERNLLKKKIKYEVEAEKTNGDEDSGDQNL

Query:  DTQVVKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVKPSSHPVSEKKKDDA-ASKRTRKRKRSRKAKTPTETTV
        DT V+KKKKK+IP+NLKDR QFKRNKAKGPNPLSCLKKKVKPS HPVSEKK DD+ A KRTRKRKRSRKAK PTET +
Subjt:  DTQVVKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVKPSSHPVSEKKKDDA-ASKRTRKRKRSRKAKTPTETTV

XP_038906639.1 rRNA-processing protein UTP23 homolog isoform X1 [Benincasa hispida]2.7e-9572.24Show/hide
Query:  MRIKKQKRQRRA------------------------------IIPADDAVAKAVGDRVKLFTTRCVLLELRALGQSYSGAFEAASQLFTARCNHEKRKSA
        M IKKQKRQRRA                              I+PADDA+AK VGD+VKLFT+RCV LELRALGQSYS  FEAA+QLFTARCNH +RKSA
Subjt:  MRIKKQKRQRRA------------------------------IIPADDAVAKAVGDRVKLFTTRCVLLELRALGQSYSGAFEAASQLFTARCNHEKRKSA

Query:  EACIIDVIGESNPEHFFVATQDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDAQRQFVKSLEEKRMHISETERNLLKKKIKYEVEAEKTNGDEDSGDQNL
        EACI DVIGESNPEHFF+ATQD NLR+QL++IPGVPLI+GLRNALFMEQPSD QRQFVKSLEE+RMH+SE ER+LLK+K KYEVE++KTNG ED GDQN 
Subjt:  EACIIDVIGESNPEHFFVATQDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDAQRQFVKSLEEKRMHISETERNLLKKKIKYEVEAEKTNGDEDSGDQNL

Query:  DTQVV--KKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVKPSSHPVSEKKKDD-----AASKRTRKRKRSRKAKTPTE
        + QV   KKKKKSIPNN+ DRAQFKRNKAKGPNPLSCLKKKVKPSSHPV+EKKKDD     AA K+TRKRKRSRK K PTE
Subjt:  DTQVV--KKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVKPSSHPVSEKKKDD-----AASKRTRKRKRSRKAKTPTE

XP_038906640.1 rRNA-processing protein UTP23 homolog isoform X2 [Benincasa hispida]4.0e-9471.79Show/hide
Query:  MRIKKQKRQRRA------------------------------IIPADDAVAKAVGDRVKLFTTRCVLLELRALGQSYSGAFEAASQLFTARCNHEKRKSA
        M IKKQKRQRRA                              I+PADDA+AK VGD+VKLFT+RCV LELRALGQSYS  FEAA+QLFTARCNH +RKSA
Subjt:  MRIKKQKRQRRA------------------------------IIPADDAVAKAVGDRVKLFTTRCVLLELRALGQSYSGAFEAASQLFTARCNHEKRKSA

Query:  EACIIDVIGESNPEHFFVATQDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDAQRQFVKSLEEKRMHISETERNLLKKKIKYEVEAEKTNGDEDSGDQNL
        EACI DVIGESNPEHFF+ATQD NLR+QL++IPGVPLI+GLRNALFMEQPSD QRQFVKSLEE+RMH+SE ER+LLK+K KYEVE++KTNG ED GDQN 
Subjt:  EACIIDVIGESNPEHFFVATQDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDAQRQFVKSLEEKRMHISETERNLLKKKIKYEVEAEKTNGDEDSGDQNL

Query:  DTQVV--KKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVKPSSHPVSEKKKD----DAASKRTRKRKRSRKAKTPTE
        + QV   KKKKKSIPNN+ DRAQFKRNKAKGPNPLSCLKKKVKPSSHPV+EKK D    +AA K+TRKRKRSRK K PTE
Subjt:  DTQVV--KKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVKPSSHPVSEKKKD----DAASKRTRKRKRSRKAKTPTE

TrEMBL top hitse value%identityAlignment
A0A0A0KTT8 Uncharacterized protein1.2e-10488.14Show/hide
Query:  IPADDAVAKAVGDRVKLFTTRCVLLELRALGQSYSGAFEAASQLFTARCNHEKRKSAEACIIDVIGESNPEHFFVATQDTNLRKQLQQIPGVPLIFGLRN
        +PAD+AVAK VGDRVKLFTTRCVLLEL+ALGQSYSGAFEAASQLFTARC+HEKRKSAEACI+DVIGESNPEHFFVATQDTNLRKQLQQIPGVPLIFGLRN
Subjt:  IPADDAVAKAVGDRVKLFTTRCVLLELRALGQSYSGAFEAASQLFTARCNHEKRKSAEACIIDVIGESNPEHFFVATQDTNLRKQLQQIPGVPLIFGLRN

Query:  ALFMEQPSDAQRQFVKSLEEKRMHISETERNLLKKKIKYEVEAEKTNGDEDSGDQNLDTQVVKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVKPS
        ALFMEQPSD QRQFVKSLEEKRMH+SE ER+LLKKK KY VEAEKTN DED  DQNLDT V+KKKKK+IP+NLKDR QFKRNKAKGPNPLSCLKKKVKPS
Subjt:  ALFMEQPSDAQRQFVKSLEEKRMHISETERNLLKKKIKYEVEAEKTNGDEDSGDQNLDTQVVKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVKPS

Query:  SHPVSEKKKDD--AASKRTRKRKRSRKAKTPTETTV
         HPVSEKKKDD   A KRTRKRKRSRKAK PTET +
Subjt:  SHPVSEKKKDD--AASKRTRKRKRSRKAKTPTETTV

A0A1S3CNY6 rRNA-processing protein UTP23 homolog7.8e-10478.7Show/hide
Query:  MRIKKQKRQRRA------------------------------IIPADDAVAKAVGDRVKLFTTRCVLLELRALGQSYSGAFEAASQLFTARCNHEKRKSA
        MRIKKQKRQRRA                              I+PAD+AVAK VGDRVKLFTTRCVLLEL+ALGQSY+GAFEAASQLFTARC+HEKRKSA
Subjt:  MRIKKQKRQRRA------------------------------IIPADDAVAKAVGDRVKLFTTRCVLLELRALGQSYSGAFEAASQLFTARCNHEKRKSA

Query:  EACIIDVIGESNPEHFFVATQDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDAQRQFVKSLEEKRMHISETERNLLKKKIKYEVEAEKTNGDEDSGDQNL
        EACI+DVIGESNPEHFFVATQDTNLRKQLQQIPGVPLIFGLRN LFMEQPSD QRQFVKSLEEKRMH+SE ER+LLKKK+KY VEAEKTN DED GDQNL
Subjt:  EACIIDVIGESNPEHFFVATQDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDAQRQFVKSLEEKRMHISETERNLLKKKIKYEVEAEKTNGDEDSGDQNL

Query:  DTQVVKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVKPSSHPVSEKKK--DDAASKRTRKRKRSRKAKTPTET
        D QV+ KKKK+I +NLKDR QFKRNKAKGPNPLSCLKKKVKPS HPVSEKKK  DD A KRTRKRKRSRKAK PTET
Subjt:  DTQVVKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVKPSSHPVSEKKK--DDAASKRTRKRKRSRKAKTPTET

A0A6J1CLD6 rRNA-processing protein UTP23 homolog2.3e-7971.61Show/hide
Query:  IIPADDAVAKAVGDRVKLFTTRCVLLELRALGQSYSGAFEAASQLFTARCNHEKRKSAEACIIDVIGESNPEHFFVATQDTNLRKQLQQIPGVPLIFGLR
        I+PAD+A+AK +G  +KLFTTRCVL EL+ALGQSYS AF+AAS+L  ARC+HE+RKSAEACI DVIGESN EHFFVATQDT+LRK+LQ+IPGVPL++GLR
Subjt:  IIPADDAVAKAVGDRVKLFTTRCVLLELRALGQSYSGAFEAASQLFTARCNHEKRKSAEACIIDVIGESNPEHFFVATQDTNLRKQLQQIPGVPLIFGLR

Query:  NALFMEQPSDAQRQFVKSLEEKRMHISETERNLLKKKIKYEVEAEKTNGDEDSGDQNLDTQVVKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVKP
        NALFMEQPS  QRQFVKS EE+R+H+SE ER+LLKK+ KY VE E+TN D   GDQNL+TQ +KK+  S  N LKD+ QFKR KAKGPNPLSC KKK  P
Subjt:  NALFMEQPSDAQRQFVKSLEEKRMHISETERNLLKKKIKYEVEAEKTNGDEDSGDQNLDTQVVKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVKP

Query:  SSHPVSEKKK---DDAASKRTRKRKRSRKAKTPTET
        S HPVSEK K   D AA  RTRKRKRSRKAK P  T
Subjt:  SSHPVSEKKK---DDAASKRTRKRKRSRKAKTPTET

A0A6J1E579 rRNA-processing protein UTP23 homolog isoform X12.1e-7263.84Show/hide
Query:  FFTSCF---SNFK-LSAANFEMRIKKQKRQRRAIIPADDAVAKAVGDRVKLFTTRCVLLELRALGQSYSGAFEAASQLFTARCNHEKRKSAEACIIDVIG
        F+T+CF     FK L    F   +   +     I+PAD A+AK +G RVK+FTTRCVLLEL+ALG SYS AFEAAS L TARC+HE RK A  CI++VIG
Subjt:  FFTSCF---SNFK-LSAANFEMRIKKQKRQRRAIIPADDAVAKAVGDRVKLFTTRCVLLELRALGQSYSGAFEAASQLFTARCNHEKRKSAEACIIDVIG

Query:  ESNPEHFFVATQDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDAQRQFVKSLEEKRMHISETERNLLKKKIK-YEVEAEKTNGDEDSGDQNLDTQVV--K
        +SN EHFFVATQDT+L+KQLQ+IPGVPLIFGLRNALFMEQP+  +RQFVKS EEKR HISE E NLL+K  K  E E E TN D D   +N + QV+  K
Subjt:  ESNPEHFFVATQDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDAQRQFVKSLEEKRMHISETERNLLKKKIK-YEVEAEKTNGDEDSGDQNLDTQVV--K

Query:  KKKKSIPNNLKDRAQFKRNKAKGPNPLSCL--KKKVKPSSHPVSEKKKDDAASKRTRKRKRSRKAKTPTET
        KKK+   N+LKDR QFKR K KGPNPLSCL  KKKV P+ HPVSEKK DD  +KRTRKRKR+RK KT  ET
Subjt:  KKKKSIPNNLKDRAQFKRNKAKGPNPLSCL--KKKVKPSSHPVSEKKKDDAASKRTRKRKRSRKAKTPTET

A0A6J1JT87 rRNA-processing protein UTP23 homolog isoform X12.1e-7263.84Show/hide
Query:  FFTSCF---SNFK-LSAANFEMRIKKQKRQRRAIIPADDAVAKAVGDRVKLFTTRCVLLELRALGQSYSGAFEAASQLFTARCNHEKRKSAEACIIDVIG
        F+T+CF     FK L    F   +   +     I+PAD A+AK +G RVK+FTTRCVLLEL+ALG SYS AFEAAS L TARC+HE RK A  CI++VIG
Subjt:  FFTSCF---SNFK-LSAANFEMRIKKQKRQRRAIIPADDAVAKAVGDRVKLFTTRCVLLELRALGQSYSGAFEAASQLFTARCNHEKRKSAEACIIDVIG

Query:  ESNPEHFFVATQDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDAQRQFVKSLEEKRMHISETERNLLKKKIK-YEVEAEKTNGDEDSGDQNLDTQVV--K
        +SN EHFFVATQDT+L+KQLQ+IPGVPLIFGLRNALFMEQP+  +RQFVKS EEKR HISE E NLL+K  K  E E E TN D D   +N + QV+  K
Subjt:  ESNPEHFFVATQDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDAQRQFVKSLEEKRMHISETERNLLKKKIK-YEVEAEKTNGDEDSGDQNLDTQVV--K

Query:  KKKKSIPNNLKDRAQFKRNKAKGPNPLSCL--KKKVKPSSHPVSEKKKDDAASKRTRKRKRSRKAKTPTET
        KKK+   N+LKDR QFKR K KGPNPLSCL  KKKV P+ HPVSEKK DD  +KRTRKRKR+RK KT  ET
Subjt:  KKKKSIPNNLKDRAQFKRNKAKGPNPLSCL--KKKVKPSSHPVSEKKKDDAASKRTRKRKRSRKAKTPTET

SwissProt top hitse value%identityAlignment
O74862 rRNA-processing protein utp232.2e-0728.34Show/hide
Query:  ANFEMRIKKQKRQRRAIIPADDAVAKAVGDRVKLFTTRCVLLELRALGQSYSGAFEAASQLFTARCNH-EKRKSAEACIIDV--IGESNPEHFFVATQDT
        A+F   + +QK      I    A+A+ V   +K   T+C + +L +           A      RC H ++  S   CI  V  I   N   + VATQD 
Subjt:  ANFEMRIKKQKRQRRAIIPADDAVAKAVGDRVKLFTTRCVLLELRALGQSYSGAFEAASQLFTARCNH-EKRKSAEACIIDV--IGESNPEHFFVATQDT

Query:  NLRKQLQQIPGVPLIFGLRNALFMEQPSDAQRQFVKSLEEKRMHISETERNLLKKKIKYEVEAEKTNGDEDSGDQNLDTQVVKKKKKSIPNNLKDRAQFK
         LR+ L+ +PGVPLI+  R+ + +E  S A      + E  +M +S+ E+ LL  K +    A +   D+    ++ D   +   + S P     +A  K
Subjt:  NLRKQLQQIPGVPLIFGLRNALFMEQPSDAQRQFVKSLEEKRMHISETERNLLKKKIKYEVEAEKTNGDEDSGDQNLDTQVVKKKKKSIPNNLKDRAQFK

Query:  RNKAKGPNPLSCLKKKVKPSSHPVSEKKK-----DDAASKRTRKRKR
        R   KGPNPLS  K+  K  +H   E         D   ++  +RKR
Subjt:  RNKAKGPNPLSCLKKKVKPSSHPVSEKKK-----DDAASKRTRKRKR

Q08DU1 rRNA-processing protein UTP23 homolog9.7e-1932.24Show/hide
Query:  KLFTTRCVLLELRALGQSYSGAFEAASQLFTARCNHEKRK-SAEACIIDVIGESNPEHFFVATQDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDAQRQF
        +L TTRCVL EL  LG+   GA   A +     C H K   S   C++ ++ + NP H+F+ATQD NL  ++++ PG+PL+F ++N + +++PS     F
Subjt:  KLFTTRCVLLELRALGQSYSGAFEAASQLFTARCNHEKRK-SAEACIIDVIGESNPEHFFVATQDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDAQRQF

Query:  VKSLEEKRMHISETERNLLKKKIKYEVEAEKTNGDEDSGDQNLDTQVVKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVKPSSHPVSEKKKDDAAS
        VK++E  ++ +S  E+  +++                            K+++ +  + + R + KR K  GPNPLSCLKKK K        +  + +AS
Subjt:  VKSLEEKRMHISETERNLLKKKIKYEVEAEKTNGDEDSGDQNLDTQVVKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVKPSSHPVSEKKKDDAAS

Query:  KRTRKRKRSRKAKT
        ++ RKRKR R   T
Subjt:  KRTRKRKRSRKAKT

Q12339 rRNA-processing protein UTP235.7e-1130.73Show/hide
Query:  VKLFTTRCVLLELRALGQSYSGAFEAASQLFTARCNHEKR--KSAEACIIDVIGES--NPEHFFVATQDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDA
        VK+  T+C +  L        GA   A Q    RCNH  +  KS   CI  V+  S  N   + VA+QD +LR++L+ +PGVPLI   R+ + ME  S A
Subjt:  VKLFTTRCVLLELRALGQSYSGAFEAASQLFTARCNHEKR--KSAEACIIDVIGES--NPEHFFVATQDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDA

Query:  QRQFVKSLEEKRMHISETERNLLKKKIKYEVEAEKTNGDEDSGDQNLDTQVVKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVKPSSHPVSEKKKD
          +  K  EE++++    + N+ K               ++SGD +    + KK+K                  K PNPLS +KKK K +S     K K+
Subjt:  QRQFVKSLEEKRMHISETERNLLKKKIKYEVEAEKTNGDEDSGDQNLDTQVVKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVKPSSHPVSEKKKD

Query:  DAASKRTRKRKRSRKAKT
        D + ++ ++R+R  K+ T
Subjt:  DAASKRTRKRKRSRKAKT

Q9BRU9 rRNA-processing protein UTP23 homolog8.8e-2034.88Show/hide
Query:  KLFTTRCVLLELRALGQSYSGAFEAASQLFTARCNHEKRK-SAEACIIDVIGESNPEHFFVATQDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDAQRQF
        +L TTRCVL EL  LG+   GA   A +     C H K   S   C++ ++ E NP H+FVATQD NL  ++++ PGVPL+F ++N + +++PS     F
Subjt:  KLFTTRCVLLELRALGQSYSGAFEAASQLFTARCNHEKRK-SAEACIIDVIGESNPEHFFVATQDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDAQRQF

Query:  VKSLEEKRMHISETERNLLKKKIKYEVEAEKTNGDEDSGDQNLDTQVVKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVKPSSHPVSEKKKDDAAS
        VK++E  ++ +S  E    K+ IK+                        K+++ +  N +   + KR K  GPNPLSCLKKK K             +AS
Subjt:  VKSLEEKRMHISETERNLLKKKIKYEVEAEKTNGDEDSGDQNLDTQVVKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVKPSSHPVSEKKKDDAAS

Query:  KRTRKRKRSRKAKTP
        ++ RKRKR R    P
Subjt:  KRTRKRKRSRKAKTP

Q9CX11 rRNA-processing protein UTP23 homolog5.1e-2033.33Show/hide
Query:  RAIIPADDAVAKAVGDRVKLFTTRCVLLELRALGQSYSGAFEAASQLFTARCNHEKRK-SAEACIIDVIGESNPEHFFVATQDTNLRKQLQQIPGVPLIF
        R  I   D + + +    +L TTRCVL EL  LG+   GA   A +     C H K   S   C++ ++ E NP H+FVATQD NL  ++++ PG+PL+F
Subjt:  RAIIPADDAVAKAVGDRVKLFTTRCVLLELRALGQSYSGAFEAASQLFTARCNHEKRK-SAEACIIDVIGESNPEHFFVATQDTNLRKQLQQIPGVPLIF

Query:  GLRNALFMEQPSDAQRQFVKSLEEKRMHISETERNLLKKKIKYEVEAEKTNGDEDSGDQNLDTQVVKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKK
         ++N + +++PS     FVK++E  ++ +S  E+  +K+                          +K+++  + N    R + K+ K  GPNPLSCLKKK
Subjt:  GLRNALFMEQPSDAQRQFVKSLEEKRMHISETERNLLKKKIKYEVEAEKTNGDEDSGDQNLDTQVVKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKK

Query:  VK--PSSHPVSEKKKDDAASKRTRKRKRSRKAKT
         K   +  P SEKK         RKRKR R   T
Subjt:  VK--PSSHPVSEKKKDDAASKRTRKRKRSRKAKT

Arabidopsis top hitse value%identityAlignment
AT2G34570.1 PIN domain-like family protein8.9e-4446.12Show/hide
Query:  IIPADDAVAKAVGDRVKLFTTRCVLLELRALGQSYSGAFEAASQLFTARCNHEKRKSAEACIIDVIGESNPEHFFVATQDTNLRKQLQQIPGVPLIFGLR
        I PAD AV++ +G  VKLFTTRCV+ EL  LG+ ++ + EAA  L TA C HE+ K+A+ C+ +VIG  N EHFF+ TQD   R++LQQ   VPL+FGLR
Subjt:  IIPADDAVAKAVGDRVKLFTTRCVLLELRALGQSYSGAFEAASQLFTARCNHEKRKSAEACIIDVIGESNPEHFFVATQDTNLRKQLQQIPGVPLIFGLR

Query:  NALFMEQPSDAQRQFVKSLEEKRMHISETERNLLKK---KIKYEVEAEKTNGDEDSGDQNLDTQVVKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKK
        N L ++QPSD QRQ  K  E KR+ +++TE+ LL K   KI      E T  +E+ G      +VV  K       +KDR QFKRN+AKGPNPLSC+KKK
Subjt:  NALFMEQPSDAQRQFVKSLEEKRMHISETERNLLKK---KIKYEVEAEKTNGDEDSGDQNLDTQVVKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKK

Query:  VK--------PSSHPVSEKKKDDAASKRTRKRKRSRKAKTPTETT
         +         S+    ++KK+  +  + R RKRS+K K+  E T
Subjt:  VK--------PSSHPVSEKKKDDAASKRTRKRKRSRKAKTPTETT

AT2G46230.1 PIN domain-like family protein5.7e-0633.33Show/hide
Query:  TRCVLLELRALGQSYSGAFEAASQLFTAR--CNHEKRKSAEACIIDVIGESNPEHFFVATQDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDA
        T CV+ EL  LGQ Y  A   A      R  C H K   A+ C++D +  +  + F VAT D +L++++++IPGVP+++       +E+  +A
Subjt:  TRCVLLELRALGQSYSGAFEAASQLFTAR--CNHEKRKSAEACIIDVIGESNPEHFFVATQDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGACTCGTAAACAGCGGAGCTGGCGCTACCCTCAGCGACTACGACAGTCTTGGCATGAACGACACGAGGTAGTCGATGATTTCTTCTTCTCTTCTCAATTTCTCGC
CCTCGGCTTCTCCTGCGCTGCTCCAGCGCCAGCAACAGCAACCTCCGGCATCCGCGCTGCTCCAACCTCCGGCATCCGAACAAACCAGATCGGCAACGAGATTTTCACTT
CTTGCTTCTCAAATTTCAAACTTTCAGCGGCCGATTTCGAGTTCTTCACTTCTTGCTTCTCAAATTTCAAACTTTCGGCGGCCAATTTCGAGATGAGAATAAAAAAACAA
AAGCGTCAACGGAGAGCTATAATACCGGCTGATGATGCTGTTGCTAAAGCTGTTGGTGACAGAGTAAAGCTTTTCACCACCAGATGTGTACTCTTAGAGTTGAGGGCTCT
TGGCCAATCCTACTCTGGAGCTTTTGAGGCAGCTAGTCAGCTGTTCACTGCGAGATGCAACCATGAAAAAAGAAAGAGTGCTGAGGCATGCATCATTGATGTGATTGGTG
AATCAAATCCTGAGCATTTCTTTGTTGCCACTCAAGATACTAATCTTAGGAAGCAGCTTCAACAGATACCTGGGGTCCCACTCATATTTGGTCTGAGAAATGCACTTTTC
ATGGAGCAACCATCTGATGCACAACGACAGTTTGTTAAGTCTTTAGAAGAAAAAAGGATGCACATTTCTGAGACGGAACGTAATTTATTGAAGAAAAAAATAAAGTATGA
AGTGGAAGCTGAGAAAACTAATGGAGATGAAGATTCGGGAGATCAAAATTTAGACACACAAGTTGTGAAAAAGAAAAAGAAAAGCATTCCAAATAATTTGAAAGACAGAG
CTCAATTTAAGAGAAACAAAGCAAAGGGTCCAAACCCTCTTTCATGTTTGAAGAAAAAGGTCAAACCAAGCTCACATCCAGTTTCAGAGAAGAAGAAAGATGATGCTGCA
TCAAAGCGGACTCGAAAACGAAAGCGGTCGCGGAAGGCCAAAACGCCAACAGAGACAACCGTGCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGACTCGTAAACAGCGGAGCTGGCGCTACCCTCAGCGACTACGACAGTCTTGGCATGAACGACACGAGGTAGTCGATGATTTCTTCTTCTCTTCTCAATTTCTCGC
CCTCGGCTTCTCCTGCGCTGCTCCAGCGCCAGCAACAGCAACCTCCGGCATCCGCGCTGCTCCAACCTCCGGCATCCGAACAAACCAGATCGGCAACGAGATTTTCACTT
CTTGCTTCTCAAATTTCAAACTTTCAGCGGCCGATTTCGAGTTCTTCACTTCTTGCTTCTCAAATTTCAAACTTTCGGCGGCCAATTTCGAGATGAGAATAAAAAAACAA
AAGCGTCAACGGAGAGCTATAATACCGGCTGATGATGCTGTTGCTAAAGCTGTTGGTGACAGAGTAAAGCTTTTCACCACCAGATGTGTACTCTTAGAGTTGAGGGCTCT
TGGCCAATCCTACTCTGGAGCTTTTGAGGCAGCTAGTCAGCTGTTCACTGCGAGATGCAACCATGAAAAAAGAAAGAGTGCTGAGGCATGCATCATTGATGTGATTGGTG
AATCAAATCCTGAGCATTTCTTTGTTGCCACTCAAGATACTAATCTTAGGAAGCAGCTTCAACAGATACCTGGGGTCCCACTCATATTTGGTCTGAGAAATGCACTTTTC
ATGGAGCAACCATCTGATGCACAACGACAGTTTGTTAAGTCTTTAGAAGAAAAAAGGATGCACATTTCTGAGACGGAACGTAATTTATTGAAGAAAAAAATAAAGTATGA
AGTGGAAGCTGAGAAAACTAATGGAGATGAAGATTCGGGAGATCAAAATTTAGACACACAAGTTGTGAAAAAGAAAAAGAAAAGCATTCCAAATAATTTGAAAGACAGAG
CTCAATTTAAGAGAAACAAAGCAAAGGGTCCAAACCCTCTTTCATGTTTGAAGAAAAAGGTCAAACCAAGCTCACATCCAGTTTCAGAGAAGAAGAAAGATGATGCTGCA
TCAAAGCGGACTCGAAAACGAAAGCGGTCGCGGAAGGCCAAAACGCCAACAGAGACAACCGTGCAATAGTTGGGTCCATATTTGTTGTGCCTTGGGAAATTTTGTTGCTT
TGAGAGAGAAAATTACTGATGCGGATATGTTCGAGAATGAGCTATTTTTTAAGAACAAAATAATGAGCTATTGAGCTATTGATGAAGAACCACAAATCTCGACCAACTGG
AACAACACCATTTCCTGAAGTGAATGTTGTAAATTTTAATAATCCTGGTCGAAATTGAGGTCGTAATCGTGACAGAGGAAGAAATAATTATTATTTTCATGGTGATTATT
CTAATCATCCAATTTTTAAAAGAACCACAAGAAATGATTATAAAGGAAAATCTCCACAAGACAAAAATTCAAAAGGTGATGAGCATAAATGCTCTCGATGCGGGATGACT
AGGCACCGGTCTCGTGTTTGTCGTACATCAAAACACCTAGTTGATTTCTATCAAGCTTCCTCGAAGGACAAAGTGAAAAATGTGAAGCGAATTTTGCATACTAGGATAAT
GATATATTCGACTTATCCAATATGACAAATTTAAATGTGGCGGACTTCTTTGAATCTCCTAAAGAGAAAATCAACACAAATGATGACATAACAAGTGTTTCCTTTGCTTT
TGAGAATATTTAGAATTAATGTTGTTTGTTTTATCT
Protein sequenceShow/hide protein sequence
METRKQRSWRYPQRLRQSWHERHEVVDDFFFSSQFLALGFSCAAPAPATATSGIRAAPTSGIRTNQIGNEIFTSCFSNFKLSAADFEFFTSCFSNFKLSAANFEMRIKKQ
KRQRRAIIPADDAVAKAVGDRVKLFTTRCVLLELRALGQSYSGAFEAASQLFTARCNHEKRKSAEACIIDVIGESNPEHFFVATQDTNLRKQLQQIPGVPLIFGLRNALF
MEQPSDAQRQFVKSLEEKRMHISETERNLLKKKIKYEVEAEKTNGDEDSGDQNLDTQVVKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVKPSSHPVSEKKKDDAA
SKRTRKRKRSRKAKTPTETTVQ