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Clc01G08920 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G08920
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionphosphatidylinositol N-acetylglucosaminyltransferase subunit C
Genome locationClcChr01:9582359..9587253
RNA-Seq ExpressionClc01G08920
SyntenyClc01G08920
Gene Ontology termsGO:0006506 - GPI anchor biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009450 - Phosphatidylinositol N-acetylglucosaminyltransferase subunit C
IPR029472 - Retrotransposon Copia-like, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054307.1 putative phosphatidylinositol N-acetylglucosaminyltransferase subunit C [Cucumis melo var. makuwa]5.4e-3247.32Show/hide
Query:  TSGGSYHTKPKWRKVAYGGIQPRFDVNHSHESFLEDIVMNSNVFKRDKLKVMLDFVSISEYMCIVVTLVGLVWTYAPGSTL-------------------
        TSG SYHT+PKWRKVAYGG+QP FD NH+ ESFLEDIVMN+NV KRD LKVMLD VSISEY+CI VTLVGLVWTY   STL                   
Subjt:  TSGGSYHTKPKWRKVAYGGIQPRFDVNHSHESFLEDIVMNSNVFKRDKLKVMLDFVSISEYMCIVVTLVGLVWTYAPGSTL-------------------

Query:  ----------------------------------------------------------------GSTVRALGDLKNIWLTNCISLNASIVAFILITSRLP
                                                                        GSTVRA GD+KN  LT+CISLNASIVA +LI SRLP
Subjt:  ----------------------------------------------------------------GSTVRALGDLKNIWLTNCISLNASIVAFILITSRLP

Query:  SRSHI
        SRSH+
Subjt:  SRSHI

XP_004150424.1 phosphatidylinositol N-acetylglucosaminyltransferase subunit C isoform X2 [Cucumis sativus]3.8e-3348.06Show/hide
Query:  STSGGSYHTKPKWRKVAYGGIQPRFDVNHSHESFLEDIVMNSNVFKRDKLKVMLDFVSISEYMCIVVTLVGLVWTYAPGSTL------------------
        STSGGSYHT+PKWRKVAYGG+QP FD NH+ ESFLEDIVMN+NV KRD LKVMLD VSISEY+CI VTLVGLVWTY   STL                  
Subjt:  STSGGSYHTKPKWRKVAYGGIQPRFDVNHSHESFLEDIVMNSNVFKRDKLKVMLDFVSISEYMCIVVTLVGLVWTYAPGSTL------------------

Query:  -----------------------------------------------------------------GSTVRALGDLKNIWLTNCISLNASIVAFILITSRL
                                                                         GSTVRA GD+KN  LT+CISLNASIVA +LI SRL
Subjt:  -----------------------------------------------------------------GSTVRALGDLKNIWLTNCISLNASIVAFILITSRL

Query:  PSRSHI
        PSRSH+
Subjt:  PSRSHI

XP_016902350.1 PREDICTED: putative phosphatidylinositol N-acetylglucosaminyltransferase subunit C [Cucumis melo]7.1e-3243.97Show/hide
Query:  TSGGSYHTKPKWRKVAYGGIQPRFDVNHSHESFLEDIVMNSNVFKRDKLKVMLDFVSISEYMCIVVTLVGLVWTYAPGSTL-------------------
        TSG SYHT+PKWRKVAYGG+QP FD NH+ ESFLEDIVMN+NV KRD LKVMLD VSISEY+CI VTLVGLVWTY   STL                   
Subjt:  TSGGSYHTKPKWRKVAYGGIQPRFDVNHSHESFLEDIVMNSNVFKRDKLKVMLDFVSISEYMCIVVTLVGLVWTYAPGSTL-------------------

Query:  ----------------------------------------------------------------GSTVRALGDLKNIWLTNCISLNASIVAFILITSRLP
                                                                        GSTVRA GD+KN  LT+CISLNASIVA +LI SRLP
Subjt:  ----------------------------------------------------------------GSTVRALGDLKNIWLTNCISLNASIVAFILITSRLP

Query:  SRSHIDPAKKSFIAV-LSKPIMAETAKTEEIH
        SRSH+       + V L  P++  + K   +H
Subjt:  SRSHIDPAKKSFIAV-LSKPIMAETAKTEEIH

XP_031736217.1 phosphatidylinositol N-acetylglucosaminyltransferase subunit C isoform X1 [Cucumis sativus]1.7e-3347.44Show/hide
Query:  KSFGL----STSGGSYHTKPKWRKVAYGGIQPRFDVNHSHESFLEDIVMNSNVFKRDKLKVMLDFVSISEYMCIVVTLVGLVWTYAPGSTL---------
        +SFG     STSGGSYHT+PKWRKVAYGG+QP FD NH+ ESFLEDIVMN+NV KRD LKVMLD VSISEY+CI VTLVGLVWTY   STL         
Subjt:  KSFGL----STSGGSYHTKPKWRKVAYGGIQPRFDVNHSHESFLEDIVMNSNVFKRDKLKVMLDFVSISEYMCIVVTLVGLVWTYAPGSTL---------

Query:  --------------------------------------------------------------------------GSTVRALGDLKNIWLTNCISLNASIV
                                                                                  GSTVRA GD+KN  LT+CISLNASIV
Subjt:  --------------------------------------------------------------------------GSTVRALGDLKNIWLTNCISLNASIV

Query:  AFILITSRLPSRSHI
        A +LI SRLPSRSH+
Subjt:  AFILITSRLPSRSHI

XP_038894273.1 phosphatidylinositol N-acetylglucosaminyltransferase subunit C [Benincasa hispida]1.6e-3147.09Show/hide
Query:  STSGGSYHTKPKWRKVAYGGIQPRFDVNHSHESFLEDIVMNSNVFKRDKLKVMLDFVSISEYMCIVVTLVGLVWTYAPGSTL------------------
        STSGG+YHT+ KWRKVAYGG+QP FD NH+ ESFLEDIVMN+NV KRD LKVMLD VSISEY+CI VTLVGLVWTY   STL                  
Subjt:  STSGGSYHTKPKWRKVAYGGIQPRFDVNHSHESFLEDIVMNSNVFKRDKLKVMLDFVSISEYMCIVVTLVGLVWTYAPGSTL------------------

Query:  -----------------------------------------------------------------GSTVRALGDLKNIWLTNCISLNASIVAFILITSRL
                                                                         GSTVRA GDLKN  LT+CISLNASIVA +LI SRL
Subjt:  -----------------------------------------------------------------GSTVRALGDLKNIWLTNCISLNASIVAFILITSRL

Query:  PSRSHI
        PSR H+
Subjt:  PSRSHI

TrEMBL top hitse value%identityAlignment
A0A0A0LTI6 Uncharacterized protein1.8e-3348.06Show/hide
Query:  STSGGSYHTKPKWRKVAYGGIQPRFDVNHSHESFLEDIVMNSNVFKRDKLKVMLDFVSISEYMCIVVTLVGLVWTYAPGSTL------------------
        STSGGSYHT+PKWRKVAYGG+QP FD NH+ ESFLEDIVMN+NV KRD LKVMLD VSISEY+CI VTLVGLVWTY   STL                  
Subjt:  STSGGSYHTKPKWRKVAYGGIQPRFDVNHSHESFLEDIVMNSNVFKRDKLKVMLDFVSISEYMCIVVTLVGLVWTYAPGSTL------------------

Query:  -----------------------------------------------------------------GSTVRALGDLKNIWLTNCISLNASIVAFILITSRL
                                                                         GSTVRA GD+KN  LT+CISLNASIVA +LI SRL
Subjt:  -----------------------------------------------------------------GSTVRALGDLKNIWLTNCISLNASIVAFILITSRL

Query:  PSRSHI
        PSRSH+
Subjt:  PSRSHI

A0A1S4E2Z6 putative phosphatidylinositol N-acetylglucosaminyltransferase subunit C3.4e-3243.97Show/hide
Query:  TSGGSYHTKPKWRKVAYGGIQPRFDVNHSHESFLEDIVMNSNVFKRDKLKVMLDFVSISEYMCIVVTLVGLVWTYAPGSTL-------------------
        TSG SYHT+PKWRKVAYGG+QP FD NH+ ESFLEDIVMN+NV KRD LKVMLD VSISEY+CI VTLVGLVWTY   STL                   
Subjt:  TSGGSYHTKPKWRKVAYGGIQPRFDVNHSHESFLEDIVMNSNVFKRDKLKVMLDFVSISEYMCIVVTLVGLVWTYAPGSTL-------------------

Query:  ----------------------------------------------------------------GSTVRALGDLKNIWLTNCISLNASIVAFILITSRLP
                                                                        GSTVRA GD+KN  LT+CISLNASIVA +LI SRLP
Subjt:  ----------------------------------------------------------------GSTVRALGDLKNIWLTNCISLNASIVAFILITSRLP

Query:  SRSHIDPAKKSFIAV-LSKPIMAETAKTEEIH
        SRSH+       + V L  P++  + K   +H
Subjt:  SRSHIDPAKKSFIAV-LSKPIMAETAKTEEIH

A0A2N9F4V9 Uncharacterized protein1.1e-3063.08Show/hide
Query:  TKPKWRKVAYGGIQPRFDVNHSHESFLEDIVMNSNVFKRDKLKVMLDFVSISEYMCIVVTLVGLVWTYAPGSTL---------------GSTVRALGDLK
        T+PKWRKVAYGG+QP FD NH+ ESFLE +VMN+NV KRD LKVM D VSIS+Y+CI V LVGLVWTY   STL               GSTVRA G LK
Subjt:  TKPKWRKVAYGGIQPRFDVNHSHESFLEDIVMNSNVFKRDKLKVMLDFVSISEYMCIVVTLVGLVWTYAPGSTL---------------GSTVRALGDLK

Query:  NIWLTNCISLNASIVAFILITSRLPSRSHI
        N  LT+ ISLNAS+VA + I SRLPSR H+
Subjt:  NIWLTNCISLNASIVAFILITSRLPSRSHI

A0A5A7UIA7 Putative phosphatidylinositol N-acetylglucosaminyltransferase subunit C2.6e-3247.32Show/hide
Query:  TSGGSYHTKPKWRKVAYGGIQPRFDVNHSHESFLEDIVMNSNVFKRDKLKVMLDFVSISEYMCIVVTLVGLVWTYAPGSTL-------------------
        TSG SYHT+PKWRKVAYGG+QP FD NH+ ESFLEDIVMN+NV KRD LKVMLD VSISEY+CI VTLVGLVWTY   STL                   
Subjt:  TSGGSYHTKPKWRKVAYGGIQPRFDVNHSHESFLEDIVMNSNVFKRDKLKVMLDFVSISEYMCIVVTLVGLVWTYAPGSTL-------------------

Query:  ----------------------------------------------------------------GSTVRALGDLKNIWLTNCISLNASIVAFILITSRLP
                                                                        GSTVRA GD+KN  LT+CISLNASIVA +LI SRLP
Subjt:  ----------------------------------------------------------------GSTVRALGDLKNIWLTNCISLNASIVAFILITSRLP

Query:  SRSHI
        SRSH+
Subjt:  SRSHI

A0A6J1K0F6 phosphatidylinositol N-acetylglucosaminyltransferase subunit C7.1e-3042.06Show/hide
Query:  STSGGSYHTKPKWRKVAYGGIQPRFDVNHSHESFLEDIVMNSNVFKRDKLKVMLDFVSISEYMCIVVTLVGLVWTYAPGSTL------------------
        ST+ GSY+T+PKWRKVAYGG+QP FD NH+ ESFLEDIVMN+NV KRD LKVMLD VSISEY+CI V LVGLVWTY   STL                  
Subjt:  STSGGSYHTKPKWRKVAYGGIQPRFDVNHSHESFLEDIVMNSNVFKRDKLKVMLDFVSISEYMCIVVTLVGLVWTYAPGSTL------------------

Query:  -----------------------------------------------------------------GSTVRALGDLKNIWLTNCISLNASIVAFILITSRL
                                                                         GSTVRA G+LKN  LT+CISLNASIVA +LI SRL
Subjt:  -----------------------------------------------------------------GSTVRALGDLKNIWLTNCISLNASIVAFILITSRL

Query:  PSRSHIDPAKKSFIAV-LSKPIMAETAKTEEIH
        PSR H+       + + L  P++  + K   +H
Subjt:  PSRSHIDPAKKSFIAV-LSKPIMAETAKTEEIH

SwissProt top hitse value%identityAlignment
O64761 Phosphatidylinositol N-acetylglucosaminyltransferase subunit C1.9e-1936.04Show/hide
Query:  PKWRKVAYGGIQPRFDVNHSHESFLEDIVMNSNVFKRDKLKVMLDFVSISEYMCIVVTLVGLVWTYAPGSTL----------------------------
        PKWRKVAYGG+Q  +D N++ ESFLE++VMN+NV +RD LKVM D VSIS+Y+CI V LV LVW +   S+L                            
Subjt:  PKWRKVAYGGIQPRFDVNHSHESFLEDIVMNSNVFKRDKLKVMLDFVSISEYMCIVVTLVGLVWTYAPGSTL----------------------------

Query:  --------------------------------------------------------GSTVRALGDLKNIWLTNCISLNASIVAFILITSRLPSRSHI
                                                                GST+RA G LK   LT+CIS+NASIVA + + SRLPSR H+
Subjt:  --------------------------------------------------------GSTVRALGDLKNIWLTNCISLNASIVAFILITSRLPSRSHI

Arabidopsis top hitse value%identityAlignment
AT2G34980.1 phosphatidylinositolglycan synthase family protein1.3e-2036.04Show/hide
Query:  PKWRKVAYGGIQPRFDVNHSHESFLEDIVMNSNVFKRDKLKVMLDFVSISEYMCIVVTLVGLVWTYAPGSTL----------------------------
        PKWRKVAYGG+Q  +D N++ ESFLE++VMN+NV +RD LKVM D VSIS+Y+CI V LV LVW +   S+L                            
Subjt:  PKWRKVAYGGIQPRFDVNHSHESFLEDIVMNSNVFKRDKLKVMLDFVSISEYMCIVVTLVGLVWTYAPGSTL----------------------------

Query:  --------------------------------------------------------GSTVRALGDLKNIWLTNCISLNASIVAFILITSRLPSRSHI
                                                                GST+RA G LK   LT+CIS+NASIVA + + SRLPSR H+
Subjt:  --------------------------------------------------------GSTVRALGDLKNIWLTNCISLNASIVAFILITSRLPSRSHI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAACCTTCTCAAGTGCTTCATCCACAACATCTCTTTGTACCCTTCGGCTATTGCAAAATACTCTGCTTCAATTGTAGAAAGTGGAACACACTTCTGCAATCTTGA
CTGCCAAGACACTGCACCACCTGCAAATGCCATCAAGTCGTTTGGATTGAGCACTAGTGGAGGCAGTTATCACACAAAACCCAAATGGAGAAAAGTGGCATATGGAGGTA
TTCAACCTAGGTTTGATGTCAACCACAGCCACGAGTCTTTTCTTGAAGATATTGTCATGAATTCCAATGTCTTCAAAAGGGATAAACTAAAGGTGATGTTGGACTTTGTT
TCCATATCCGAATATATGTGCATTGTCGTCACGCTTGTTGGCTTGGTTTGGACATACGCACCCGGATCGACTCTTGGTTCCACTGTCAGGGCTCTTGGAGATCTTAAGAA
TATATGGTTAACCAATTGCATTTCTTTAAATGCTTCTATTGTGGCCTTCATCCTTATTACTTCACGTCTTCCATCTCGATCACATATTGATCCTGCCAAAAAGTCATTCA
TTGCTGTTCTTTCTAAACCCATCATGGCAGAAACCGCAAAAACGGAAGAAATACACCAAACACAAACCAACATATCCATTGTCAACAATGTGTTCAATGGAAATAACTTC
TTAACATGGAAGAGAGCAATCAAATTTGCTTTGGGAGCCAGGGACAAACTCAGTTTTGTCAATGGTAAAAAGAACAAACCTAAAGAAGATGCTACAGATTTTGATTCATG
GCAAAAACAAGATTGCATGGTCATGGCCTGGATCTTAGGATCCATTTCAAAGGACATATCAACCAGCTTTCTCTACACCAGCAGCTCAAGGGAATTATGCAAAGAACTTG
AGGAGAGGTATGGTGAGGATAAGGGGACTGTCAAGTTCCAAATCCAGCCAAAAATCAACTCTATGAGGCAAGGTGATCAAACTGTGGCCACTAGTACACAAGAATCAAGA
GACTTTGGGATGAATTGGCAGCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGACAACCTTCTCAAGTGCTTCATCCACAACATCTCTTTGTACCCTTCGGCTATTGCAAAATACTCTGCTTCAATTGTAGAAAGTGGAACACACTTCTGCAATCTTGA
CTGCCAAGACACTGCACCACCTGCAAATGCCATCAAGTCGTTTGGATTGAGCACTAGTGGAGGCAGTTATCACACAAAACCCAAATGGAGAAAAGTGGCATATGGAGGTA
TTCAACCTAGGTTTGATGTCAACCACAGCCACGAGTCTTTTCTTGAAGATATTGTCATGAATTCCAATGTCTTCAAAAGGGATAAACTAAAGGTGATGTTGGACTTTGTT
TCCATATCCGAATATATGTGCATTGTCGTCACGCTTGTTGGCTTGGTTTGGACATACGCACCCGGATCGACTCTTGGTTCCACTGTCAGGGCTCTTGGAGATCTTAAGAA
TATATGGTTAACCAATTGCATTTCTTTAAATGCTTCTATTGTGGCCTTCATCCTTATTACTTCACGTCTTCCATCTCGATCACATATTGATCCTGCCAAAAAGTCATTCA
TTGCTGTTCTTTCTAAACCCATCATGGCAGAAACCGCAAAAACGGAAGAAATACACCAAACACAAACCAACATATCCATTGTCAACAATGTGTTCAATGGAAATAACTTC
TTAACATGGAAGAGAGCAATCAAATTTGCTTTGGGAGCCAGGGACAAACTCAGTTTTGTCAATGGTAAAAAGAACAAACCTAAAGAAGATGCTACAGATTTTGATTCATG
GCAAAAACAAGATTGCATGGTCATGGCCTGGATCTTAGGATCCATTTCAAAGGACATATCAACCAGCTTTCTCTACACCAGCAGCTCAAGGGAATTATGCAAAGAACTTG
AGGAGAGGTATGGTGAGGATAAGGGGACTGTCAAGTTCCAAATCCAGCCAAAAATCAACTCTATGAGGCAAGGTGATCAAACTGTGGCCACTAGTACACAAGAATCAAGA
GACTTTGGGATGAATTGGCAGCCATAG
Protein sequenceShow/hide protein sequence
MDNLLKCFIHNISLYPSAIAKYSASIVESGTHFCNLDCQDTAPPANAIKSFGLSTSGGSYHTKPKWRKVAYGGIQPRFDVNHSHESFLEDIVMNSNVFKRDKLKVMLDFV
SISEYMCIVVTLVGLVWTYAPGSTLGSTVRALGDLKNIWLTNCISLNASIVAFILITSRLPSRSHIDPAKKSFIAVLSKPIMAETAKTEEIHQTQTNISIVNNVFNGNNF
LTWKRAIKFALGARDKLSFVNGKKNKPKEDATDFDSWQKQDCMVMAWILGSISKDISTSFLYTSSSRELCKELEERYGEDKGTVKFQIQPKINSMRQGDQTVATSTQESR
DFGMNWQP