; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc01G09040 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G09040
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionTPX2 domain-containing protein
Genome locationClcChr01:9794046..9798494
RNA-Seq ExpressionClc01G09040
SyntenyClc01G09040
Gene Ontology termsGO:0032147 - activation of protein kinase activity (biological process)
GO:0060236 - regulation of mitotic spindle organization (biological process)
GO:0090307 - mitotic spindle assembly (biological process)
GO:0005880 - nuclear microtubule (cellular component)
GO:0072686 - mitotic spindle (cellular component)
GO:0008017 - microtubule binding (molecular function)
GO:0030295 - protein kinase activator activity (molecular function)
InterPro domainsIPR009675 - TPX2
IPR027329 - TPX2, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648441.1 hypothetical protein Csa_008062 [Cucumis sativus]4.1e-4377.05Show/hide
Query:  DIKERFCNKPKVMIKENTKPHDFKLHTEQRAIKRAMFNYST----FWL--------KMGQIIEEEEIRLLRKEMIPKAQLMPFFDKPFSPQRSKRPLTIP
        DIKERFCNKPKVMIKENT+PHDFKLHTEQRAIKRAMFNYS     F +        ++ +IIEEEEIRLLRKEMIPKAQLMPFFDKPF PQRSKRPLTIP
Subjt:  DIKERFCNKPKVMIKENTKPHDFKLHTEQRAIKRAMFNYST----FWL--------KMGQIIEEEEIRLLRKEMIPKAQLMPFFDKPFSPQRSKRPLTIP

Query:  REPSFHITSTKSWNCFSNTEIK
        REPS H+  TKSWNCF NTE +
Subjt:  REPSFHITSTKSWNCFSNTEIK

XP_011656218.1 protein TPX2 [Cucumis sativus]1.9e-3574.55Show/hide
Query:  MIKENTKPHDFKLHTEQRAIKRAMFNYST----FWL--------KMGQIIEEEEIRLLRKEMIPKAQLMPFFDKPFSPQRSKRPLTIPREPSFHITSTKS
        MIKENT+PHDFKLHTEQRAIKRAMFNYS     F +        ++ +IIEEEEIRLLRKEMIPKAQLMPFFDKPF PQRSKRPLTIPREPS H+  TKS
Subjt:  MIKENTKPHDFKLHTEQRAIKRAMFNYST----FWL--------KMGQIIEEEEIRLLRKEMIPKAQLMPFFDKPFSPQRSKRPLTIPREPSFHITSTKS

Query:  WNCFSNTEIK
        WNCF NTE +
Subjt:  WNCFSNTEIK

XP_020535771.1 protein TPX2 isoform X3 [Jatropha curcas]1.2e-3157.89Show/hide
Query:  MSQSDDIKERFCNK----PKVMIKENTKPHDFKLHTEQRAIKRAMFNYST---FWL---------KMGQIIEEEEIRLLRKEMIPKAQLMPFFDKPFSPQ
        +   DD+KE+ C+K    PK   KENTKP +FKLHT+QRA KRAMFNYS     +L         K+ +IIEEEE+R LRKEMIP+AQLMPFFD+PF PQ
Subjt:  MSQSDDIKERFCNK----PKVMIKENTKPHDFKLHTEQRAIKRAMFNYST---FWL---------KMGQIIEEEEIRLLRKEMIPKAQLMPFFDKPFSPQ

Query:  RSKRPLTIPREPSFHITSTKSWNCFSNTEIKFF
        RS RPLTIPREPSF + ++K W+C S  E+  F
Subjt:  RSKRPLTIPREPSFHITSTKSWNCFSNTEIKFF

XP_038875933.1 protein TPX2-like isoform X1 [Benincasa hispida]4.9e-4477.27Show/hide
Query:  QSDDIKERFCNKPKVMIKEN--TKPHDFKLHTEQRAIKRAMFNYST----FWL--------KMGQIIEEEEIRLLRKEMIPKAQLMPFFDKPFSPQRSKR
        +SDDIKERFCNKPKV+IKEN  T+PHDFKLHTEQRAIKRAMFNYS     F +        ++ +IIEEEEIRLLRKEMIPKAQLMPFFDKPFSPQRSKR
Subjt:  QSDDIKERFCNKPKVMIKEN--TKPHDFKLHTEQRAIKRAMFNYST----FWL--------KMGQIIEEEEIRLLRKEMIPKAQLMPFFDKPFSPQRSKR

Query:  PLTIPREPSFHITSTKSWNCFSNTEIKFFPQN
        PLTIPREPSFHITS     CFSNTEIKF PQN
Subjt:  PLTIPREPSFHITSTKSWNCFSNTEIKFFPQN

XP_038875934.1 protein TPX2-like isoform X2 [Benincasa hispida]3.7e-3675.63Show/hide
Query:  KVMIKEN--TKPHDFKLHTEQRAIKRAMFNYST----FWL--------KMGQIIEEEEIRLLRKEMIPKAQLMPFFDKPFSPQRSKRPLTIPREPSFHIT
        KV+IKEN  T+PHDFKLHTEQRAIKRAMFNYS     F +        ++ +IIEEEEIRLLRKEMIPKAQLMPFFDKPFSPQRSKRPLTIPREPSFHIT
Subjt:  KVMIKEN--TKPHDFKLHTEQRAIKRAMFNYST----FWL--------KMGQIIEEEEIRLLRKEMIPKAQLMPFFDKPFSPQRSKRPLTIPREPSFHIT

Query:  STKSWNCFSNTEIKFFPQN
        S     CFSNTEIKF PQN
Subjt:  STKSWNCFSNTEIKFFPQN

TrEMBL top hitse value%identityAlignment
A0A061EE26 TPX2 family protein6.0e-3260Show/hide
Query:  DDIKERFCNKPKVMIKENTKPHDFKLHTEQRAIKRAMFNYST---FWL---------KMGQIIEEEEIRLLRKEMIPKAQLMPFFDKPFSPQRSKRPLTI
        D +K++    PK   KENTKP DFKLHTEQRA+KRAMFNYS     +L         K+ ++IEEEE+RLLRKEM+PKAQLMPFFD+PF PQRS RPLTI
Subjt:  DDIKERFCNKPKVMIKENTKPHDFKLHTEQRAIKRAMFNYST---FWL---------KMGQIIEEEEIRLLRKEMIPKAQLMPFFDKPFSPQRSKRPLTI

Query:  PREPSFHITSTKSWNCFSNTEIKFF
        PREPSF   ++K W C S  E+ +F
Subjt:  PREPSFHITSTKSWNCFSNTEIKFF

A0A1U8KTG5 protein TPX2 isoform X15.1e-3156.15Show/hide
Query:  MSQSDDIKERFCN-KPKVMIKENTKPHDFKLHTEQRAIKRAMFNYST---FWL---------KMGQIIEEEEIRLLRKEMIPKAQLMPFFDKPFSPQRSK
        +   D +K+++    PK   KENTKP +FKLHT QRA+KRAMFNYS    F+L         K+ ++IE+EEIR LRKEM+PKAQLMPFFD+PF PQRS 
Subjt:  MSQSDDIKERFCN-KPKVMIKENTKPHDFKLHTEQRAIKRAMFNYST---FWL---------KMGQIIEEEEIRLLRKEMIPKAQLMPFFDKPFSPQRSK

Query:  RPLTIPREPSFHITSTKSWNCFSNTEIKFF
        RPLTIPREPSF   ++K W+C S  E+ +F
Subjt:  RPLTIPREPSFHITSTKSWNCFSNTEIKFF

A0A5D2JQU0 TPX2 domain-containing protein5.1e-3156.15Show/hide
Query:  MSQSDDIKERFCN-KPKVMIKENTKPHDFKLHTEQRAIKRAMFNYST---FWL---------KMGQIIEEEEIRLLRKEMIPKAQLMPFFDKPFSPQRSK
        +   D +K+++    PK   KENTKP +FKLHT QRA+KRAMFNYS    F+L         K+ ++IE+EEIR LRKEM+PKAQLMPFFD+PF PQRS 
Subjt:  MSQSDDIKERFCN-KPKVMIKENTKPHDFKLHTEQRAIKRAMFNYST---FWL---------KMGQIIEEEEIRLLRKEMIPKAQLMPFFDKPFSPQRSK

Query:  RPLTIPREPSFHITSTKSWNCFSNTEIKFF
        RPLTIPREPSF   ++K W+C S  E+ +F
Subjt:  RPLTIPREPSFHITSTKSWNCFSNTEIKFF

A0A6J1BFV8 protein TPX23.0e-3163.48Show/hide
Query:  PKVMIKENTKPHDFKLHTEQRAIKRAMFNYST---FWL---------KMGQIIEEEEIRLLRKEMIPKAQLMPFFDKPFSPQRSKRPLTIPREPSFHITS
        PK   KENTKP DFKLHTEQRA+KRAMFNYS     +L         K+ ++IEEEE+RLLRKEM+PKAQLMPFFD+PF PQRS RPLTIPREPSF   +
Subjt:  PKVMIKENTKPHDFKLHTEQRAIKRAMFNYST---FWL---------KMGQIIEEEEIRLLRKEMIPKAQLMPFFDKPFSPQRSKRPLTIPREPSFHITS

Query:  TKSWNCFSNTEIKFF
        +K W+C S  E+ +F
Subjt:  TKSWNCFSNTEIKFF

A0A6J1H532 protein TPX2-like7.9e-3265.49Show/hide
Query:  VMIKENTKPHDFKLHTEQRAIKRAMFNYSTFWL------------KMGQIIEEEEIRLLRKEMIPKAQLMPFFDKPFSPQRSKRPLTIPREPSFHITSTK
        V  KENT+  DFKLHT++RAI+RA+FNYS                K+ +IIEEEEIRLLRKEMIPKAQLMPFFD+PFSPQRSKRPLTIPREP FH+TS+K
Subjt:  VMIKENTKPHDFKLHTEQRAIKRAMFNYSTFWL------------KMGQIIEEEEIRLLRKEMIPKAQLMPFFDKPFSPQRSKRPLTIPREPSFHITSTK

Query:  SWNCFSNTEIKFF
         WNC  +T+I  F
Subjt:  SWNCFSNTEIKFF

SwissProt top hitse value%identityAlignment
F4I2H7 Protein TPX22.1e-0530.19Show/hide
Query:  IKERFCNKPKVMIKENTKPHDFKLHTEQRAIKRAMFNYS-----------TFWLKMGQIIEEEE-IRLLRKEMIPKAQLMPFFDKPFSPQRSKRPLTIPR
        IKE     P+ +    T+  +F LH E RA++RA F++                +  +++EEE  ++ +RK M+P A+ +P F+KPF PQ+S +  T  +
Subjt:  IKERFCNKPKVMIKENTKPHDFKLHTEQRAIKRAMFNYS-----------TFWLKMGQIIEEEE-IRLLRKEMIPKAQLMPFFDKPFSPQRSKRPLTIPR

Query:  EPSFHI
         P+  +
Subjt:  EPSFHI

Arabidopsis top hitse value%identityAlignment
AT1G03780.2 targeting protein for XKLP21.5e-0630.19Show/hide
Query:  IKERFCNKPKVMIKENTKPHDFKLHTEQRAIKRAMFNYS-----------TFWLKMGQIIEEEE-IRLLRKEMIPKAQLMPFFDKPFSPQRSKRPLTIPR
        IKE     P+ +    T+  +F LH E RA++RA F++                +  +++EEE  ++ +RK M+P A+ +P F+KPF PQ+S +  T  +
Subjt:  IKERFCNKPKVMIKENTKPHDFKLHTEQRAIKRAMFNYS-----------TFWLKMGQIIEEEE-IRLLRKEMIPKAQLMPFFDKPFSPQRSKRPLTIPR

Query:  EPSFHI
         P+  +
Subjt:  EPSFHI

AT3G01015.1 TPX2 (targeting protein for Xklp2) protein family8.4e-1842.86Show/hide
Query:  NKPKVMIKENTKPHDFKLHTEQRAIKRAMFN------------YSTFWLKMGQIIEEEEIRLLRKEMIPKAQLMPFFDKPFSPQRSKRPLTIPREPSFHI
        N  K  +K+ T P D KLH++ RA++RA F+            Y T   +  ++ EEEEIR LRKE++PKAQ MP+FD+PF P+RS +  T+PR+P F+I
Subjt:  NKPKVMIKENTKPHDFKLHTEQRAIKRAMFN------------YSTFWLKMGQIIEEEEIRLLRKEMIPKAQLMPFFDKPFSPQRSKRPLTIPREPSFHI

Query:  TSTKSWNCFSNT
           K   C S +
Subjt:  TSTKSWNCFSNT

AT5G15510.1 TPX2 (targeting protein for Xklp2) protein family2.4e-1742.86Show/hide
Query:  KENTKPHDFKLHTEQRAIKRAMFNYSTFWL------------KMGQIIEEEEIRLLRKEMIPKAQLMPFFDKPFSPQRSKRPLTIPREPSFHITSTKSWN
        K+ T+P D  LH++ RA++RA F+Y                 +  ++ EEEEIR LRKE++PKAQ MP+FD+PF P+RS +  T PR+P FHI   K   
Subjt:  KENTKPHDFKLHTEQRAIKRAMFNYSTFWL------------KMGQIIEEEEIRLLRKEMIPKAQLMPFFDKPFSPQRSKRPLTIPREPSFHITSTKSWN

Query:  CFSNT
        C S++
Subjt:  CFSNT

AT5G15510.2 TPX2 (targeting protein for Xklp2) protein family5.8e-1143.59Show/hide
Query:  KENTKPHDFKLHTEQRAIKRAMFNYSTFWL------------KMGQIIEEEEIRLLRKEMIPKAQLMPFFDKPFSPQR
        K+ T+P D  LH++ RA++RA F+Y                 +  ++ EEEEIR LRKE++PKAQ MP+FD+PF P+R
Subjt:  KENTKPHDFKLHTEQRAIKRAMFNYSTFWL------------KMGQIIEEEEIRLLRKEMIPKAQLMPFFDKPFSPQR

AT5G37478.1 TPX2 (targeting protein for Xklp2) protein family4.0e-2848.51Show/hide
Query:  MSQSDDIKERFCNKPKVM---------IKENTKPHDFKLHTEQRAIKRAMFNYS---TFWL---------KMGQIIEEEEIRLLRKEMIPKAQLMPFFDK
        M++ + +KER  +K K            KEN KP +FKLH+ +RA+KRAMFNYS    +++         ++ ++IEEEEIR+LRKEM+PKAQLMPFFD+
Subjt:  MSQSDDIKERFCNKPKVM---------IKENTKPHDFKLHTEQRAIKRAMFNYS---TFWL---------KMGQIIEEEEIRLLRKEMIPKAQLMPFFDK

Query:  PFSPQRSKRPLTIPREPSFHITSTKSWNCFSNTE
        PF PQRS RPLT+P+EPSF   ++  W C  N +
Subjt:  PFSPQRSKRPLTIPREPSFHITSTKSWNCFSNTE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCCAAAGTGATGATATCAAAGAGAGATTTTGCAACAAACCCAAGGTTATGATCAAAGAAAACACAAAGCCACATGATTTCAAATTGCACACCGAACAAAGGGCCAT
CAAACGTGCAATGTTCAACTACTCGACATTTTGGCTGAAAATGGGTCAGATTATAGAAGAGGAAGAGATTCGTTTGCTAAGAAAAGAAATGATTCCCAAAGCTCAGTTAA
TGCCTTTCTTTGACAAGCCCTTCTCTCCTCAAAGATCAAAAAGACCCTTAACAATTCCTAGAGAGCCAAGTTTCCACATAACGAGTACCAAATCTTGGAATTGCTTTTCC
AACACTGAAATCAAATTCTTCCCACAAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCCCAAAGTGATGATATCAAAGAGAGATTTTGCAACAAACCCAAGGTTATGATCAAAGAAAACACAAAGCCACATGATTTCAAATTGCACACCGAACAAAGGGCCAT
CAAACGTGCAATGTTCAACTACTCGACATTTTGGCTGAAAATGGGTCAGATTATAGAAGAGGAAGAGATTCGTTTGCTAAGAAAAGAAATGATTCCCAAAGCTCAGTTAA
TGCCTTTCTTTGACAAGCCCTTCTCTCCTCAAAGATCAAAAAGACCCTTAACAATTCCTAGAGAGCCAAGTTTCCACATAACGAGTACCAAATCTTGGAATTGCTTTTCC
AACACTGAAATCAAATTCTTCCCACAAAATTAAGTTTGAGGGTGAATTGGATGAATCCAGCCTTTTAATATTTAGTTTGAAGATATTGATTACAACAATCTTTTACTTTT
AATTGAACTACTTTTTGTATGGGACCAAAAATAAACCACATGAATTTCTTGTTAAATAATTAATATTTATATATATATATATATAAAGATGCATATTTGTGTAAATTTAT
GCCGAC
Protein sequenceShow/hide protein sequence
MSQSDDIKERFCNKPKVMIKENTKPHDFKLHTEQRAIKRAMFNYSTFWLKMGQIIEEEEIRLLRKEMIPKAQLMPFFDKPFSPQRSKRPLTIPREPSFHITSTKSWNCFS
NTEIKFFPQN