CuGenDBv2

Gene ID	Clc01G09110
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Voltage-dependent L-type calcium channel subunit
Genome location	ClcChr01:9917283..9921561
RNA-Seq Expression	Clc01G09110
Synteny	Clc01G09110
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004140295.1 uncharacterized protein LOC101212066 [Cucumis sativus]

1.8e-92

88.34

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Query:  MAEAYDSSDRNATVPVEEEDTTSYQSKGVRIEDQTVYEPLRRLFADIFFPDETKGSSLFQRVKVSVAENGPAVGQACRNFGRDVLCWTRRGSPLRAVLVI
        MAEA+DS DRN TVPVEEED +S+QSKGV  EDQTVYEPLRRL A+IFFPDE KG SLF RVKVSV +NGPAV QACRNFGRDVL WTRRGSPLRA+LVI
Subjt:  MAEAYDSSDRNATVPVEEEDTTSYQSKGVRIEDQTVYEPLRRLFADIFFPDETKGSSLFQRVKVSVAENGPAVGQACRNFGRDVLCWTRRGSPLRAVLVI

Query:  SVGTIVLLALTGSLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAIYIGALGVALFVISTATISAIVAVVIAAGWIGFFCLVWLAARKSFRLV
        SVGTIVLLA+TGSLIFL FFLAATLNAIIISLLVSLAAVGGFLALFFACVTAIY+GALGVALFVISTATISAIVAVVIAAGWIGFFC+VWLA RKSF L 
Subjt:  SVGTIVLLALTGSLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAIYIGALGVALFVISTATISAIVAVVIAAGWIGFFCLVWLAARKSFRLV

Query:  KRSMSASNSAISAFSYARRAHKD
        KRS+SASNSAISAFSYARRAHKD
Subjt:  KRSMSASNSAISAFSYARRAHKD

XP_008463179.1 PREDICTED: uncharacterized protein LOC103501388 [Cucumis melo]

1.7e-90

87.44

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Query:  MAEAYDSSDRNATVPVEEEDTTSYQSKGVRIEDQTVYEPLRRLFADIFFPDETKGSSLFQRVKVSVAENGPAVGQACRNFGRDVLCWTRRGSPLRAVLVI
        MAEA+DS  RN TVPVEEED +S+QSKG+ I+DQTVYEPLRRL A+IFFPDE KG SLF RVKVSVA+NGPAVGQACRNFG DVL WTRRGSPLRA+LVI
Subjt:  MAEAYDSSDRNATVPVEEEDTTSYQSKGVRIEDQTVYEPLRRLFADIFFPDETKGSSLFQRVKVSVAENGPAVGQACRNFGRDVLCWTRRGSPLRAVLVI

Query:  SVGTIVLLALTGSLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAIYIGALGVALFVISTATISAIVAVVIAAGWIGFFCLVWLAARKSFRLV
        SVGTIVLLA+TGSLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAIY+GALGVALFVISTATISAIVAVVIAAGWIGFF +VWLA  KSF L 
Subjt:  SVGTIVLLALTGSLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAIYIGALGVALFVISTATISAIVAVVIAAGWIGFFCLVWLAARKSFRLV

Query:  KRSMSASNSAISAFSYARRAHKD
        KRS+SASNSAISAFSYARRAHKD
Subjt:  KRSMSASNSAISAFSYARRAHKD

XP_022141354.1 uncharacterized protein LOC111011773 [Momordica charantia]

1.0e-87

83.41

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Query:  MAEAYDSSDRNATVPVEEEDTTSYQSKGVRIEDQTVYEPLRRLFADIFFPDETKGSSLFQRVKVSVAENGPAVGQACRNFGRDVLCWTRRGSPLRAVLVI
        M E YDS DRN  V VEEED  SY SKGVR EDQTVYEPLRRL A+IFFPDE KG+SLF RVK+SVAENGPAVGQACRN GRDVL WTRRGSPLRA+LVI
Subjt:  MAEAYDSSDRNATVPVEEEDTTSYQSKGVRIEDQTVYEPLRRLFADIFFPDETKGSSLFQRVKVSVAENGPAVGQACRNFGRDVLCWTRRGSPLRAVLVI

Query:  SVGTIVLLALTGSLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAIYIGALGVALFVISTATISAIVAVVIAAGWIGFFCLVWLAARKSFRLV
        SVGTI LLALTG LIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTA+YIGAL VA+FVISTAT SAIVAV++A GWIGFFC+VWLA R+SF   
Subjt:  SVGTIVLLALTGSLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAIYIGALGVALFVISTATISAIVAVVIAAGWIGFFCLVWLAARKSFRLV

Query:  KRSMSASNSAISAFSYARRAHKD
        K+S+SAS+SAISAFSYARRAHKD
Subjt:  KRSMSASNSAISAFSYARRAHKD

XP_023514904.1 uncharacterized protein LOC111779077 [Cucurbita pepo subsp. pepo]

3.9e-87

82.06

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Query:  MAEAYDSSDRNATVPVEEEDTTSYQSKGVRIEDQTVYEPLRRLFADIFFPDETKGSSLFQRVKVSVAENGPAVGQACRNFGRDVLCWTRRGSPLRAVLVI
        MAE YDS DRN TVPVEE+D TS++SKGV   DQTVYE LRRL A++F PD+ KGSSLFQRVKVS+ ENGPAV +ACRN GRDVLCWTRRGSPLRA+LVI
Subjt:  MAEAYDSSDRNATVPVEEEDTTSYQSKGVRIEDQTVYEPLRRLFADIFFPDETKGSSLFQRVKVSVAENGPAVGQACRNFGRDVLCWTRRGSPLRAVLVI

Query:  SVGTIVLLALTGSLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAIYIGALGVALFVISTATISAIVAVVIAAGWIGFFCLVWLAARKSFRLV
        SVGTI LLALTG LIFLLFFLAAT NA++ISLLVSLAAVGGFLALFFAC+TA+YIGAL VALFVISTATISAIVAVVIAAGWIGFFC+VWLA RKSF + 
Subjt:  SVGTIVLLALTGSLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAIYIGALGVALFVISTATISAIVAVVIAAGWIGFFCLVWLAARKSFRLV

Query:  KRSMSASNSAISAFSYARRAHKD
        K+SMSA +SAISAFS+ARRAHKD
Subjt:  KRSMSASNSAISAFSYARRAHKD

XP_038906498.1 uncharacterized protein LOC120092475 [Benincasa hispida]

3.7e-98

91.03

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Query:  MAEAYDSSDRNATVPVEEEDTTSYQSKGVRIEDQTVYEPLRRLFADIFFPDETKGSSLFQRVKVSVAENGPAVGQACRNFGRDVLCWTRRGSPLRAVLVI
        MAEAYDS DRNAT PVEEED +S+QSKGVR+ED TVYEPLRRL  +IFFPDETKGSSLFQRVKVSVAENGPAVGQACRNFGRDVLCWTRRGSPLRA+LVI
Subjt:  MAEAYDSSDRNATVPVEEEDTTSYQSKGVRIEDQTVYEPLRRLFADIFFPDETKGSSLFQRVKVSVAENGPAVGQACRNFGRDVLCWTRRGSPLRAVLVI

Query:  SVGTIVLLALTGSLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAIYIGALGVALFVISTATISAIVAVVIAAGWIGFFCLVWLAARKSFRLV
        SVGTIVLLALTGSLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAIYIGAL VALFVISTATISAIV VVIAAGW+GFFC+VWLA RKSF L 
Subjt:  SVGTIVLLALTGSLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAIYIGALGVALFVISTATISAIVAVVIAAGWIGFFCLVWLAARKSFRLV

Query:  KRSMSASNSAISAFSYARRAHKD
        KRS++ASNSAISAFSYARRAHKD
Subjt:  KRSMSASNSAISAFSYARRAHKD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KNC3 Uncharacterized protein

8.7e-93

88.34

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Query:  MAEAYDSSDRNATVPVEEEDTTSYQSKGVRIEDQTVYEPLRRLFADIFFPDETKGSSLFQRVKVSVAENGPAVGQACRNFGRDVLCWTRRGSPLRAVLVI
        MAEA+DS DRN TVPVEEED +S+QSKGV  EDQTVYEPLRRL A+IFFPDE KG SLF RVKVSV +NGPAV QACRNFGRDVL WTRRGSPLRA+LVI
Subjt:  MAEAYDSSDRNATVPVEEEDTTSYQSKGVRIEDQTVYEPLRRLFADIFFPDETKGSSLFQRVKVSVAENGPAVGQACRNFGRDVLCWTRRGSPLRAVLVI

Query:  SVGTIVLLALTGSLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAIYIGALGVALFVISTATISAIVAVVIAAGWIGFFCLVWLAARKSFRLV
        SVGTIVLLA+TGSLIFL FFLAATLNAIIISLLVSLAAVGGFLALFFACVTAIY+GALGVALFVISTATISAIVAVVIAAGWIGFFC+VWLA RKSF L 
Subjt:  SVGTIVLLALTGSLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAIYIGALGVALFVISTATISAIVAVVIAAGWIGFFCLVWLAARKSFRLV

Query:  KRSMSASNSAISAFSYARRAHKD
        KRS+SASNSAISAFSYARRAHKD
Subjt:  KRSMSASNSAISAFSYARRAHKD

A0A1S3CIL4 uncharacterized protein LOC103501388

8.2e-91

87.44

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Query:  MAEAYDSSDRNATVPVEEEDTTSYQSKGVRIEDQTVYEPLRRLFADIFFPDETKGSSLFQRVKVSVAENGPAVGQACRNFGRDVLCWTRRGSPLRAVLVI
        MAEA+DS  RN TVPVEEED +S+QSKG+ I+DQTVYEPLRRL A+IFFPDE KG SLF RVKVSVA+NGPAVGQACRNFG DVL WTRRGSPLRA+LVI
Subjt:  MAEAYDSSDRNATVPVEEEDTTSYQSKGVRIEDQTVYEPLRRLFADIFFPDETKGSSLFQRVKVSVAENGPAVGQACRNFGRDVLCWTRRGSPLRAVLVI

Query:  SVGTIVLLALTGSLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAIYIGALGVALFVISTATISAIVAVVIAAGWIGFFCLVWLAARKSFRLV
        SVGTIVLLA+TGSLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAIY+GALGVALFVISTATISAIVAVVIAAGWIGFF +VWLA  KSF L 
Subjt:  SVGTIVLLALTGSLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAIYIGALGVALFVISTATISAIVAVVIAAGWIGFFCLVWLAARKSFRLV

Query:  KRSMSASNSAISAFSYARRAHKD
        KRS+SASNSAISAFSYARRAHKD
Subjt:  KRSMSASNSAISAFSYARRAHKD

A0A5A7V6K3 Uncharacterized protein

8.2e-91

87.44

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Query:  MAEAYDSSDRNATVPVEEEDTTSYQSKGVRIEDQTVYEPLRRLFADIFFPDETKGSSLFQRVKVSVAENGPAVGQACRNFGRDVLCWTRRGSPLRAVLVI
        MAEA+DS  RN TVPVEEED +S+QSKG+ I+DQTVYEPLRRL A+IFFPDE KG SLF RVKVSVA+NGPAVGQACRNFG DVL WTRRGSPLRA+LVI
Subjt:  MAEAYDSSDRNATVPVEEEDTTSYQSKGVRIEDQTVYEPLRRLFADIFFPDETKGSSLFQRVKVSVAENGPAVGQACRNFGRDVLCWTRRGSPLRAVLVI

Query:  SVGTIVLLALTGSLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAIYIGALGVALFVISTATISAIVAVVIAAGWIGFFCLVWLAARKSFRLV
        SVGTIVLLA+TGSLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAIY+GALGVALFVISTATISAIVAVVIAAGWIGFF +VWLA  KSF L 
Subjt:  SVGTIVLLALTGSLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAIYIGALGVALFVISTATISAIVAVVIAAGWIGFFCLVWLAARKSFRLV

Query:  KRSMSASNSAISAFSYARRAHKD
        KRS+SASNSAISAFSYARRAHKD
Subjt:  KRSMSASNSAISAFSYARRAHKD

A0A6J1CIE7 uncharacterized protein LOC111011773

5.0e-88

83.41

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Query:  MAEAYDSSDRNATVPVEEEDTTSYQSKGVRIEDQTVYEPLRRLFADIFFPDETKGSSLFQRVKVSVAENGPAVGQACRNFGRDVLCWTRRGSPLRAVLVI
        M E YDS DRN  V VEEED  SY SKGVR EDQTVYEPLRRL A+IFFPDE KG+SLF RVK+SVAENGPAVGQACRN GRDVL WTRRGSPLRA+LVI
Subjt:  MAEAYDSSDRNATVPVEEEDTTSYQSKGVRIEDQTVYEPLRRLFADIFFPDETKGSSLFQRVKVSVAENGPAVGQACRNFGRDVLCWTRRGSPLRAVLVI

Query:  SVGTIVLLALTGSLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAIYIGALGVALFVISTATISAIVAVVIAAGWIGFFCLVWLAARKSFRLV
        SVGTI LLALTG LIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTA+YIGAL VA+FVISTAT SAIVAV++A GWIGFFC+VWLA R+SF   
Subjt:  SVGTIVLLALTGSLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAIYIGALGVALFVISTATISAIVAVVIAAGWIGFFCLVWLAARKSFRLV

Query:  KRSMSASNSAISAFSYARRAHKD
        K+S+SAS+SAISAFSYARRAHKD
Subjt:  KRSMSASNSAISAFSYARRAHKD

A0A6J1E7P4 uncharacterized protein LOC111430635

1.2e-86

81.17

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Query:  MAEAYDSSDRNATVPVEEEDTTSYQSKGVRIEDQTVYEPLRRLFADIFFPDETKGSSLFQRVKVSVAENGPAVGQACRNFGRDVLCWTRRGSPLRAVLVI
        MAE YDS DRN TVPV+E+D TS++SKGV   D+TVYE LRRL A++F PD+ KGSSLFQRVKVS+ ENGPAV +ACRN GRDVLCWTRRGSPLRA+LVI
Subjt:  MAEAYDSSDRNATVPVEEEDTTSYQSKGVRIEDQTVYEPLRRLFADIFFPDETKGSSLFQRVKVSVAENGPAVGQACRNFGRDVLCWTRRGSPLRAVLVI

Query:  SVGTIVLLALTGSLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAIYIGALGVALFVISTATISAIVAVVIAAGWIGFFCLVWLAARKSFRLV
        SVGTI LLALTG LIFLLFFLAAT NA++ISLLVSLAAVGGFLALFFAC+TA+YIGAL VALFVISTATISAIVAVVIAAGWIGFFC+VWLA RKSF + 
Subjt:  SVGTIVLLALTGSLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAIYIGALGVALFVISTATISAIVAVVIAAGWIGFFCLVWLAARKSFRLV

Query:  KRSMSASNSAISAFSYARRAHKD
        K+SMSA +SAISAFS+ARRAHKD
Subjt:  KRSMSASNSAISAFSYARRAHKD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G16550.1 unknown protein

4.2e-47

54.76

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Query:  VEEEDTTSYQSKGVRIEDQTVYEPLRRLFADIFFPDETKG--SSLFQRVKVSVAENGPAVGQACRNFGRDVLCWTRRGSPLRAVLVISVGTIVLLALTGS
        VE+ED    +S         +Y  +      I FPD   G  SS  +RV+ SVAENGP + +A    GR++L WTRRGS LRA+LVI++GTIVLL     
Subjt:  VEEEDTTSYQSKGVRIEDQTVYEPLRRLFADIFFPDETKG--SSLFQRVKVSVAENGPAVGQACRNFGRDVLCWTRRGSPLRAVLVISVGTIVLLALTGS

Query:  LIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAIYIGALGVALFVISTATISAIVAVVIAAGWIGFFCLVWLAARKSFRLVKRSMSASNSAISA
        ++F LFF+AAT NAIIISLL+SLA  GGFLALFF C+T +YIGAL VA FVISTAT+SA+V+V+IA+GWIGFF  VWL  R S RL K+S+S   SAIS 
Subjt:  LIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAIYIGALGVALFVISTATISAIVAVVIAAGWIGFFCLVWLAARKSFRLVKRSMSASNSAISA

Query:  FSYARRAHKD
         + +R  H+D
Subjt:  FSYARRAHKD

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCGGAGGCGTACGACTCCAGTGATCGGAATGCCACCGTGCCGGTTGAGGAAGAAGATACAACCAGTTACCAATCTAAAGGAGTGCGTATTGAGGATCAGACCGTTTA
TGAACCTCTCCGCCGTCTGTTCGCCGACATTTTCTTTCCCGATGAAACTAAGGGTTCTTCTCTGTTTCAACGCGTCAAGGTCTCCGTCGCTGAGAATGGCCCTGCTGTTG
GACAAGCTTGCAGAAACTTTGGTCGCGATGTTCTTTGTTGGACTCGCAGGGGCAGTCCTCTTCGAGCAGTCCTTGTTATCTCCGTTGGGACAATTGTTCTTCTTGCATTG
ACAGGATCGCTCATCTTTCTGCTATTCTTTCTGGCTGCTACTCTCAATGCCATTATTATCTCTCTTCTTGTATCCTTGGCAGCAGTTGGAGGCTTCTTGGCCCTTTTCTT
TGCTTGCGTAACAGCTATATACATTGGAGCATTAGGAGTTGCTTTGTTTGTTATATCTACTGCAACAATCTCAGCAATTGTAGCAGTTGTGATTGCTGCAGGTTGGATTG
GGTTCTTCTGTTTGGTTTGGCTAGCAGCACGAAAAAGTTTTCGTCTTGTGAAACGGTCGATGAGCGCGAGCAATTCAGCAATTTCGGCATTTTCTTATGCTAGGCGTGCC
CACAAAGACTAG

mRNA sequence

Show/hide mRNA sequence

GTTCAAGTAATTTTGTTTTTGCCCGTCAATCTAACATTACAATTCTATCCACCGAAGAGATGACACCCGACTTATTGACTTAGTTCGCAATTTCACTATTTATTGATTCT
CAAGATTCGCCGGAGCCCCTCAAAAATGGCGGAGGCGTACGACTCCAGTGATCGGAATGCCACCGTGCCGGTTGAGGAAGAAGATACAACCAGTTACCAATCTAAAGGAG
TGCGTATTGAGGATCAGACCGTTTATGAACCTCTCCGCCGTCTGTTCGCCGACATTTTCTTTCCCGATGAAACTAAGGGTTCTTCTCTGTTTCAACGCGTCAAGGTCTCC
GTCGCTGAGAATGGCCCTGCTGTTGGACAAGCTTGCAGAAACTTTGGTCGCGATGTTCTTTGTTGGACTCGCAGGGGCAGTCCTCTTCGAGCAGTCCTTGTTATCTCCGT
TGGGACAATTGTTCTTCTTGCATTGACAGGATCGCTCATCTTTCTGCTATTCTTTCTGGCTGCTACTCTCAATGCCATTATTATCTCTCTTCTTGTATCCTTGGCAGCAG
TTGGAGGCTTCTTGGCCCTTTTCTTTGCTTGCGTAACAGCTATATACATTGGAGCATTAGGAGTTGCTTTGTTTGTTATATCTACTGCAACAATCTCAGCAATTGTAGCA
GTTGTGATTGCTGCAGGTTGGATTGGGTTCTTCTGTTTGGTTTGGCTAGCAGCACGAAAAAGTTTTCGTCTTGTGAAACGGTCGATGAGCGCGAGCAATTCAGCAATTTC
GGCATTTTCTTATGCTAGGCGTGCCCACAAAGACTAGGTAATGTTTCAGGTCCTTTAAATGAATGCTATGAATTGGGATACGTTATTGCTTCACACTCCCTCCCTCCCTC
CCCCCCCC

Protein sequence

Show/hide protein sequence

MAEAYDSSDRNATVPVEEEDTTSYQSKGVRIEDQTVYEPLRRLFADIFFPDETKGSSLFQRVKVSVAENGPAVGQACRNFGRDVLCWTRRGSPLRAVLVISVGTIVLLAL
TGSLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAIYIGALGVALFVISTATISAIVAVVIAAGWIGFFCLVWLAARKSFRLVKRSMSASNSAISAFSYARRA
HKD

Clc01G09110 (gene) of Watermelon (cordophanus) v2 genome