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Clc01G09190 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G09190
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionGAST1 protein-like protein 5
Genome locationClcChr01:10130389..10132173
RNA-Seq ExpressionClc01G09190
SyntenyClc01G09190
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAY42225.1 hypothetical protein CUMW_065150 [Citrus unshiu]3.1e-0860Show/hide
Query:  RGAIIDAQRRRTGSHACSSAKNVVQNACVCLQGPMATSKFVHATITGRLSKEVPNALEENITVFS
        + AIIDAQ+  T S AC SAKNVVQ+A VC Q  M TSK   ATITGR S+E  NALE  ++V+S
Subjt:  RGAIIDAQRRRTGSHACSSAKNVVQNACVCLQGPMATSKFVHATITGRLSKEVPNALEENITVFS

KAE8648434.1 hypothetical protein Csa_009215 [Cucumis sativus]9.0e-2476.19Show/hide
Query:  SISTSFFFFFILFFLT-NSLHFAEIAGRGAIIDAQRRRTGSHACSSAKNVVQNACVCLQGPMATSKFVHATITGRLSKEVPNAL
        S + SFF F ILF LT ++LH AEIA R A+IDA+R+RTGSHACSSAKNVVQN CVCLQG M TSK VHATITG+LSKEVPNAL
Subjt:  SISTSFFFFFILFFLT-NSLHFAEIAGRGAIIDAQRRRTGSHACSSAKNVVQNACVCLQGPMATSKFVHATITGRLSKEVPNAL

KAF1877828.1 hypothetical protein Lal_00038137 [Lupinus albus]4.8e-0948Show/hide
Query:  MTHKMAPSPPSISTSFFFFFILFFLT-NSLHFAEIAGRGAII-----DAQRRRTGSHACSSAKNVVQNACVCLQGPMATSKFVHATITGRLSKEVPNALE
        +T   AP+P   S+     F ++ +T  SL    I     ++     DAQ   T SH CS AK+VV NACVCL   MATSK VHATITGRL +EVPNA E
Subjt:  MTHKMAPSPPSISTSFFFFFILFFLT-NSLHFAEIAGRGAII-----DAQRRRTGSHACSSAKNVVQNACVCLQGPMATSKFVHATITGRLSKEVPNALE

KAF7121314.1 hypothetical protein RHSIM_Rhsim13G0216800 [Rhododendron simsii]3.0e-1165.15Show/hide
Query:  AIIDAQRRRTGSHACSSAKNVVQNACVCLQGPMATSKFVHATITGRLSKEVPNALEE-NITVFSYL
        A + AQRRRT SHACSSA++VV NACVCL+ PM TS+F  ATITGR  +E PNALE  N T   YL
Subjt:  AIIDAQRRRTGSHACSSAKNVVQNACVCLQGPMATSKFVHATITGRLSKEVPNALEE-NITVFSYL

KAF7146350.1 hypothetical protein RHSIM_Rhsim04G0108900 [Rhododendron simsii]1.5e-0754.29Show/hide
Query:  AGRGAIIDAQRRRTGSHACSSAKNVVQNACVCLQGPMATSKFVHATITGRLSKEVPNALEENITVFSYLQ
        AG  A  DA++RRT S ACSSAKN    AC   Q P ATS F  ATITGR  +E PNALE    +F+ L+
Subjt:  AGRGAIIDAQRRRTGSHACSSAKNVVQNACVCLQGPMATSKFVHATITGRLSKEVPNALEENITVFSYLQ

TrEMBL top hitse value%identityAlignment
A0A2G9HIR2 Uncharacterized protein2.2e-0760.71Show/hide
Query:  AIIDAQRRRTGSHACSSAKNVVQNACVCLQGPMATSKFVHATITGRLSKEVPNALE
        A+ DAQR  T S ACSSA+N VQ+ C CLQ   ATSKF  ATITGR  +   NALE
Subjt:  AIIDAQRRRTGSHACSSAKNVVQNACVCLQGPMATSKFVHATITGRLSKEVPNALE

A0A2H5NRA8 Uncharacterized protein1.5e-0860Show/hide
Query:  RGAIIDAQRRRTGSHACSSAKNVVQNACVCLQGPMATSKFVHATITGRLSKEVPNALEENITVFS
        + AIIDAQ+  T S AC SAKNVVQ+A VC Q  M TSK   ATITGR S+E  NALE  ++V+S
Subjt:  RGAIIDAQRRRTGSHACSSAKNVVQNACVCLQGPMATSKFVHATITGRLSKEVPNALEENITVFS

A0A5A7USS3 GAST1 protein-like protein 51.3e-0762.26Show/hide
Query:  DAQRRRTGSHACSSAKNVVQNACVCLQGPMATSKFVHATITGRLSKEVPNALE
        D QR+ + SHACS  K+VV NACV L G MAT+K V ATI GRL +E PNAL+
Subjt:  DAQRRRTGSHACSSAKNVVQNACVCLQGPMATSKFVHATITGRLSKEVPNALE

A0A6A5N0E8 Uncharacterized protein2.3e-0948Show/hide
Query:  MTHKMAPSPPSISTSFFFFFILFFLT-NSLHFAEIAGRGAII-----DAQRRRTGSHACSSAKNVVQNACVCLQGPMATSKFVHATITGRLSKEVPNALE
        +T   AP+P   S+     F ++ +T  SL    I     ++     DAQ   T SH CS AK+VV NACVCL   MATSK VHATITGRL +EVPNA E
Subjt:  MTHKMAPSPPSISTSFFFFFILFFLT-NSLHFAEIAGRGAII-----DAQRRRTGSHACSSAKNVVQNACVCLQGPMATSKFVHATITGRLSKEVPNALE

A0A6N2K5W8 Uncharacterized protein9.8e-0857.14Show/hide
Query:  AIIDAQRRRTGSHACSSAKNVVQNACVCLQGPMATSKFVHATITGRLSKEVPNALEENITVFS
        A+IDA R+ + SHACSSAK+ VQ+ACVC Q  M TS  V AT  GR  +EVP+ALE+    FS
Subjt:  AIIDAQRRRTGSHACSSAKNVVQNACVCLQGPMATSKFVHATITGRLSKEVPNALEENITVFS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACACAAAATGGCACCCTCTCCTCCTTCCATTAGCACCTCCTTCTTCTTCTTCTTCATTCTCTTTTTTCTCACTAACTCTCTGCATTTCGCTGAGATTGCAGGCCG
AGGTGCAATTATCGATGCTCAGCGACGTCGCACAGGAAGCCATGCATGTTCTTCTGCCAAAAATGTTGTGCAAAATGCCTGTGTGTGCCTCCAGGGACCTATGGCAACAA
GCAAGTTTGTCCATGCTACAATAACTGGAAGACTCAGCAAGGAGGTCCCAAATGCCCTTGAGGAGAATATTACAGTTTTTTCCTACCTTCAGTTTTTGTTTCTCTTGGGA
AATTTTCATTAA
mRNA sequenceShow/hide mRNA sequence
CAACAAGTTATTATTTATGACACACAAAATGGCACCCTCTCCTCCTTCCATTAGCACCTCCTTCTTCTTCTTCTTCATTCTCTTTTTTCTCACTAACTCTCTGCATTTCG
CTGAGATTGCAGGCCGAGGTGCAATTATCGATGCTCAGCGACGTCGCACAGGAAGCCATGCATGTTCTTCTGCCAAAAATGTTGTGCAAAATGCCTGTGTGTGCCTCCAG
GGACCTATGGCAACAAGCAAGTTTGTCCATGCTACAATAACTGGAAGACTCAGCAAGGAGGTCCCAAATGCCCTTGAGGAGAATATTACAGTTTTTTCCTACCTTCAGTT
TTTGTTTCTCTTGGGAAATTTTCATTAAATATATTTACTCCCTGATTTTAGATTCCCCTTTTTCTTTCTTTTGTATTTTTTTCCTTATTATTATTAATTTTTTAATTTTC
TTCCGTTATATATTTCAATTATTGATGGTCATACTAGTAATTTGGAAATATACCAAAAAAATATTTA
Protein sequenceShow/hide protein sequence
MTHKMAPSPPSISTSFFFFFILFFLTNSLHFAEIAGRGAIIDAQRRRTGSHACSSAKNVVQNACVCLQGPMATSKFVHATITGRLSKEVPNALEENITVFSYLQFLFLLG
NFH