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Clc01G09270 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G09270
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRossmann-like alpha/beta/alpha sandwich
Genome locationClcChr01:10210644..10210907
RNA-Seq ExpressionClc01G09270
SyntenyClc01G09270
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0000166 - nucleotide binding (molecular function)
GO:0016757 - transferase activity, transferring glycosyl groups (molecular function)
GO:0043167 - ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050691.1 putative Polyprotein [Cucumis melo var. makuwa]1.4e-1663.53Show/hide
Query:  MDDHVAEDSPED--KKKDCLCDDARPYLQIKNSIESEVIGLVDHCNSVKELLEEHVHRMFEVCMRFFRAEQKAESVTSYFMRLQK
        MDDH+ ED+PED  KKKDCL DDAR YLQ+KNSIES                +E VHRMFEVCM+FFRAEQKAE VT+YFM L+K
Subjt:  MDDHVAEDSPED--KKKDCLCDDARPYLQIKNSIESEVIGLVDHCNSVKELLEEHVHRMFEVCMRFFRAEQKAESVTSYFMRLQK

TYJ97232.1 putative Polyprotein [Cucumis melo var. makuwa]1.1e-2472.04Show/hide
Query:  MDDHVAEDSPED-KKKDCLCDDARPYLQIKNSIESEVIGLVDHCNSVKELLE---------EHVHRMFEVCMRFFRAEQKAESVTSYFMRLQK
        MDDH  E +PED KKKD LCDDAR YLQIKNSIESE+IGLVDHC S+KELLE         E V RMFEVCM+F RAEQKA SVT+YFMRL+K
Subjt:  MDDHVAEDSPED-KKKDCLCDDARPYLQIKNSIESEVIGLVDHCNSVKELLE---------EHVHRMFEVCMRFFRAEQKAESVTSYFMRLQK

TYK07745.1 putative Polyprotein [Cucumis melo var. makuwa]1.4e-1663.53Show/hide
Query:  MDDHVAEDSPED--KKKDCLCDDARPYLQIKNSIESEVIGLVDHCNSVKELLEEHVHRMFEVCMRFFRAEQKAESVTSYFMRLQK
        MDDH+ ED+PED  KKKDCL DDAR YLQ+KNSIES                +E VHRMFEVCM+FFRAEQKAE VT+YFM L+K
Subjt:  MDDHVAEDSPED--KKKDCLCDDARPYLQIKNSIESEVIGLVDHCNSVKELLEEHVHRMFEVCMRFFRAEQKAESVTSYFMRLQK

XP_031744753.1 uncharacterized protein LOC101212255 isoform X1 [Cucumis sativus]1.1e-2673.96Show/hide
Query:  MDDHVAEDSPED--KKKDCLCDDARPYLQIKNSIESEVIGLVDHCNSVKELLE---------EHVHRMFEVCMRFFRAEQKAESVTSYFMRLQKTI
        MDDH+ ED P+D  +KKD L DDAR YLQIKNSIESE+IGLVDHC SVKELLE         E VHRMFEVCM+FFRAEQKAESVTSYFMRL+K I
Subjt:  MDDHVAEDSPED--KKKDCLCDDARPYLQIKNSIESEVIGLVDHCNSVKELLE---------EHVHRMFEVCMRFFRAEQKAESVTSYFMRLQKTI

XP_038898187.1 uncharacterized protein LOC120085933 [Benincasa hispida]1.4e-2168.09Show/hide
Query:  MDDHVAEDSPED-KKKDCLCDDARPYLQIKNSIESEVIGLVDHCNSVKELLE---------EHVHRMFEVCMRFFRAEQKAESVTSYFMRLQKT
        MDDHV E+  +D KKK  L DDAR YLQIKNSIESEV+GLVDHC+ VKELLE         EHV+RMF+V M+FFR EQK E VTSYFMRL+KT
Subjt:  MDDHVAEDSPED-KKKDCLCDDARPYLQIKNSIESEVIGLVDHCNSVKELLE---------EHVHRMFEVCMRFFRAEQKAESVTSYFMRLQKT

TrEMBL top hitse value%identityAlignment
A0A5A7T406 Copia protein1.3e-1563.1Show/hide
Query:  MDDHVAEDSPED-KKKDCLCDDARPYLQIKNSIESEVIGLVDHCNSVKELLEEHVHRMFEVCMRFFRAEQKAESVTSYFMRLQK
        MDDH+ ED+PED KKKD L DDAR YLQIKNSI +                +E VHRMFEVCM+F RAEQKAESVT+YFMRL+K
Subjt:  MDDHVAEDSPED-KKKDCLCDDARPYLQIKNSIESEVIGLVDHCNSVKELLEEHVHRMFEVCMRFFRAEQKAESVTSYFMRLQK

A0A5A7UAV0 Putative Polyprotein6.8e-1763.53Show/hide
Query:  MDDHVAEDSPED--KKKDCLCDDARPYLQIKNSIESEVIGLVDHCNSVKELLEEHVHRMFEVCMRFFRAEQKAESVTSYFMRLQK
        MDDH+ ED+PED  KKKDCL DDAR YLQ+KNSIES                +E VHRMFEVCM+FFRAEQKAE VT+YFM L+K
Subjt:  MDDHVAEDSPED--KKKDCLCDDARPYLQIKNSIESEVIGLVDHCNSVKELLEEHVHRMFEVCMRFFRAEQKAESVTSYFMRLQK

A0A5D3BBM8 Putative Polyprotein5.2e-2572.04Show/hide
Query:  MDDHVAEDSPED-KKKDCLCDDARPYLQIKNSIESEVIGLVDHCNSVKELLE---------EHVHRMFEVCMRFFRAEQKAESVTSYFMRLQK
        MDDH  E +PED KKKD LCDDAR YLQIKNSIESE+IGLVDHC S+KELLE         E V RMFEVCM+F RAEQKA SVT+YFMRL+K
Subjt:  MDDHVAEDSPED-KKKDCLCDDARPYLQIKNSIESEVIGLVDHCNSVKELLE---------EHVHRMFEVCMRFFRAEQKAESVTSYFMRLQK

A0A5D3BUH9 Rossmann-like alpha/beta/alpha sandwich9.8e-1661.36Show/hide
Query:  MDDHVAEDSPED--KKKDCLCDDARPYLQIKNSIESEVIGLVDHCNSVKELLEEHVHRMFEVCMRFFRAEQKAESVTSYFMRLQKTIV
        MDDHV ED+ ED  KKKD L DDAR YLQIKN+IES                +E VH+MFEVCM+FFRAEQKAES+TSYFM L+K  V
Subjt:  MDDHVAEDSPED--KKKDCLCDDARPYLQIKNSIESEVIGLVDHCNSVKELLEEHVHRMFEVCMRFFRAEQKAESVTSYFMRLQKTIV

A0A5D3C8E2 Putative Polyprotein6.8e-1763.53Show/hide
Query:  MDDHVAEDSPED--KKKDCLCDDARPYLQIKNSIESEVIGLVDHCNSVKELLEEHVHRMFEVCMRFFRAEQKAESVTSYFMRLQK
        MDDH+ ED+PED  KKKDCL DDAR YLQ+KNSIES                +E VHRMFEVCM+FFRAEQKAE VT+YFM L+K
Subjt:  MDDHVAEDSPED--KKKDCLCDDARPYLQIKNSIESEVIGLVDHCNSVKELLEEHVHRMFEVCMRFFRAEQKAESVTSYFMRLQK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGATCATGTGGCTGAAGATTCACCAGAAGATAAAAAAAAGGATTGTCTTTGCGATGACGCTCGACCTTATCTTCAGATTAAGAACTCCATTGAGAGTGAGGTCAT
TGGTTTGGTGGATCATTGTAATTCTGTGAAGGAACTCTTAGAGGAACACGTCCATCGAATGTTTGAAGTTTGTATGAGATTCTTTCGAGCCGAACAGAAAGCAGAATCTG
TTACAAGCTATTTTATGAGACTTCAGAAAACAATAGTTGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGATCATGTGGCTGAAGATTCACCAGAAGATAAAAAAAAGGATTGTCTTTGCGATGACGCTCGACCTTATCTTCAGATTAAGAACTCCATTGAGAGTGAGGTCAT
TGGTTTGGTGGATCATTGTAATTCTGTGAAGGAACTCTTAGAGGAACACGTCCATCGAATGTTTGAAGTTTGTATGAGATTCTTTCGAGCCGAACAGAAAGCAGAATCTG
TTACAAGCTATTTTATGAGACTTCAGAAAACAATAGTTGCTTAA
Protein sequenceShow/hide protein sequence
MDDHVAEDSPEDKKKDCLCDDARPYLQIKNSIESEVIGLVDHCNSVKELLEEHVHRMFEVCMRFFRAEQKAESVTSYFMRLQKTIVA